Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GABRB3

Gene Name Gene ID Reads Annotation
GABRB3 ENSGALG00000029392 102 gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:396290]











Genes with expression patterns similar to GABRB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GABRB3 ENSGALG00000029392 102 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:396290]
2. DCBLD1 ENSGALG00000014907 19 1.679 - - - - 0.866 - 0.813 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
3. PDE4D ENSGALG00000014727 53 1.606 - - - - - 0.875 0.731 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
4. CCDC34 ENSGALG00000012194 1377 1.552 - - - - 0.779 - 0.773 - - - coiled-coil domain containing 34
5. RELN ENSGALG00000008193 43 1.521 - - - - - - 0.702 0.819 - - reelin [Source:NCBI gene;Acc:427850]
6. HEMGN ENSGALG00000045740 8 0.878 - - - - - - - 0.878 - - hemogen, transcript variant X1
7. STAT1 ENSGALG00000007651 24 0.877 - - - - - - - 0.877 - - signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:424044]
8. FAM65C 36 0.87 - - - - 0.870 - - - - - family with sequence similarity 65 member C, transcript variant X29
9. RASEF ENSGALG00000012576 155 0.867 - - - - - - - 0.867 - - RAS and EF-hand domain containing [Source:HGNC Symbol;Acc:HGNC:26464]
10. AK4 ENSGALG00000011035 9 0.864 - - - - 0.864 - - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
11. KCTD14 ENSGALG00000017266 31 0.864 - - - - 0.864 - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
12. TMED6 ENSGALG00000000654 8 0.864 - - - - 0.864 - - - - - transmembrane p24 trafficking protein 6 [Source:NCBI gene;Acc:101750075]
13. ACSF3 ENSGALG00000035225 261 0.863 - - - - - - 0.863 - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
14. ATXN7L1 ENSGALG00000008115 84 0.863 - - - - 0.863 - - - - - ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
15. MYOD1 ENSGALG00000006216 568 0.852 - - - - - - - 0.852 - - myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
16. LIMS2 ENSGALG00000001995 41 0.852 - - - - 0.852 - - - - - LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]
17. HTR2C ENSGALG00000005853 90 0.848 - - - - - - 0.848 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
18. NMU ENSGALG00000020151 29 0.848 - - - - 0.848 - - - - - neuromedin U [Source:NCBI gene;Acc:422748]
19. PUS7 ENSGALG00000008132 531 0.842 - - - - 0.842 - - - - - pseudouridylate synthase 7 [Source:NCBI gene;Acc:417709]
20. MYH7B ENSGALG00000030985 199 0.838 - - - - 0.838 - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
21. ATP6V1AL ENSGALG00000000048 21 0.834 - - - - - - 0.834 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
22. PHTF2 ENSGALG00000008335 722 0.832 - - - - - - 0.832 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
23. MKL2 186 0.83 - - - - - - 0.830 - - - MKL1/myocardin like 2, transcript variant X4
24. C5 ENSGALG00000001565 142 0.828 - - - - 0.828 - - - - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
25. MCM8 ENSGALG00000009195 9 0.828 - - - - - 0.828 - - - - minichromosome maintenance 8 homologous recombination repair factor [Source:NCBI gene;Acc:421314]
26. FCHO1 FCHO1 149 0.827 - - - - 0.827 - - - - -
27. C9orf171 C9orf171 35 0.825 - - - - - - 0.825 - - -
28. METTL15 ENSGALG00000012153 233 0.823 - - - - 0.823 - - - - - methyltransferase like 15 [Source:NCBI gene;Acc:421606]
29. LAMP1 ENSGALG00000037697 247 0.82 - - - - - - 0.820 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
30. TMEM255A ENSGALG00000008604 7 0.819 - - - - - - - 0.819 - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
31. NTRK1 ENSGALG00000019019 17 0.819 - - - - - - - 0.819 - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
32. WDR16 WDR16 22 0.819 - - - - - - - 0.819 - -
33. IL13RA1 ENSGALG00000044480 24 0.819 - - - - - - - 0.819 - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
34. TRIM14 ENSGALG00000015315 22 0.819 - - - - - - - 0.819 - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
35. POFUT1 ENSGALG00000006594 367 0.819 - - - - - - 0.819 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
36. SNX25 ENSGALG00000010610 31 0.818 - - - - - - - 0.818 - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
37. FGA ENSGALG00000009266 291 0.818 - - - - - - - 0.818 - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
38. RPS6KA6 ENSGALG00000007097 94 0.818 - - - - - - - 0.818 - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
39. ARSA ENSGALG00000035824 299 0.818 - - - - - - - 0.818 - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
40. MCM9 ENSGALG00000014883 8 0.818 - - - - - - - 0.818 - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
41. STARD13 ENSGALG00000017065 18 0.818 - - - - - - - 0.818 - - StAR related lipid transfer domain containing 13, transcript variant X3
42. MEST ENSGALG00000008111 1 0.818 - - - - - - - 0.818 - - mesoderm specific transcript [Source:HGNC Symbol;Acc:HGNC:7028]
43. PARP12 ENSGALG00000046187 10 0.818 - - - - - - - 0.818 - - poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
44. TTLL2 ENSGALG00000011344 14 0.818 - - - - - - - 0.818 - - tubulin tyrosine ligase like 2, transcript variant X1
45. SMAP2 ENSGALG00000029244 498 0.818 - - - - - - - 0.818 - - small ArfGAP2 [Source:NCBI gene;Acc:419641]
46. AK8 ENSGALG00000040923 10 0.818 - - - - - - - 0.818 - - adenylate kinase 8, transcript variant X1
47. ALDH6A1 ENSGALG00000010211 29 0.818 - - - - - - - 0.818 - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
48. BOK ENSGALG00000005772 117 0.818 - - - - - - - 0.818 - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
49. SEC16A ENSGALG00000002364 19 0.818 - - - - - - - 0.818 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
50. AK7 ENSGALG00000011093 9 0.818 - - - - - - - 0.818 - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
51. PALM ENSGALG00000026055 8 0.818 - - - - - - - 0.818 - - paralemmin [Source:NCBI gene;Acc:101750199]
52. FBXO16 7 0.818 - - - - - - - 0.818 - - F-box protein 16, transcript variant X1
53. TFRC 31 0.818 - - - - - - - 0.818 - - transferrin receptor, transcript variant X1
54. PRPF39 184 0.817 - - - - - - 0.817 - - - pre-mRNA processing factor 39, transcript variant X7
55. VTI1B ENSGALG00000009526 133 0.816 - - - - - - 0.816 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
56. PEAK1 ENSGALG00000002759 39 0.816 - - - - - - - - - 0.816 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
57. TROJANZ ENSGALG00000027747 37 0.815 - - - - - - - 0.815 - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
58. PACSIN1 ENSGALG00000002802 6 0.815 - - - - - - - 0.815 - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
59. BMPR1A ENSGALG00000002003 20 0.814 - - - - - 0.814 - - - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
60. TP53I3 ENSGALG00000016502 178 0.814 - - - - - - 0.814 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
61. MUC5B MUC5B 62 0.813 - - - - - - 0.813 - - -
62. SLC35F3 ENSGALG00000011003 324 0.813 - - - - 0.813 - - - - - solute carrier family 35 member F3 [Source:HGNC Symbol;Acc:HGNC:23616]
63. ENSGALG00000023475 ENSGALG00000023475 19 0.813 - - - - - - 0.813 - - -
64. NAPRT1 NAPRT1 227 0.813 - - - - - - 0.813 - - -
65. NSUN5 ENSGALG00000000891 1356 0.813 - - - - - - 0.813 - - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
66. C18H17ORF67 ENSGALG00000024428 10 0.813 - - - - - - 0.813 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
67. ANO3 ENSGALG00000013311 16 0.813 - - - - - - 0.813 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
68. TEX2 ENSGALG00000003496 23 0.813 - - - - - - 0.813 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
69. ENSGALG00000001515 ENSGALG00000001515 833 0.811 - - - - - - 0.811 - - -
70. CCDC39 ENSGALG00000021855 23 0.811 - - - - - - - - - 0.811 coiled-coil domain containing 39
71. MLF1 ENSGALG00000009654 619 0.811 - - - - - - 0.811 - - - myeloid leukemia factor 1, transcript variant X3
72. KDELC2 ENSGALG00000017158 479 0.809 - - - - - - 0.809 - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
73. BBS12 142 0.806 - - - - - - 0.806 - - - Bardet-Biedl syndrome 12
74. MYO1E ENSGALG00000004150 40 0.806 - - - - - - - 0.806 - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
75. OTUD7A ENSGALG00000003802 72 0.805 - - - - - 0.805 - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
76. TPTE2 ENSGALG00000017031 29 0.805 - - - - - 0.805 - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
77. PRKCE ENSGALG00000010000 99 0.803 - - - - - - 0.803 - - - protein kinase C epsilon, transcript variant X1
78. FAM82B FAM82B 374 0.803 - - - - - - 0.803 - - -
79. ASB12 ENSGALG00000007594 185 0.803 - - - - - - - 0.803 - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
80. KIAA1919 KIAA1919 58 0.802 - - - - 0.802 - - - - -
81. ENSGALG00000012463 ENSGALG00000012463 242 0.799 - - - - - - 0.799 - - -
82. SVOPL ENSGALG00000012812 27 0.799 - - - - - - 0.799 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
83. MOCOS ENSGALG00000013149 25 0.798 - - - - - - 0.798 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
84. PFN2 313 0.796 - - - - 0.796 - - - - - profilin 2, transcript variant X2
85. DISP3 ENSGALG00000004662 146 0.796 - - - - 0.796 - - - - - dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
86. NKD1 ENSGALG00000003767 76 0.795 - - - - - - 0.795 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
87. KIAA0040 ENSGALG00000030543 53 0.795 - - - - 0.795 - - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
88. SIL1 ENSGALG00000002457 147 0.794 - - - - 0.794 - - - - - SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
89. GHR ENSGALG00000014855 131 0.793 - - - - - - - - - 0.793 growth hormone receptor [Source:NCBI gene;Acc:408184]
90. ENSGALG00000023180 ENSGALG00000023180 83 0.792 - - - - - - - 0.792 - -
91. TDP1 ENSGALG00000010669 57 0.792 - - - - - - - 0.792 - - tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:18884]
92. NCOA6 ENSGALG00000001182 83 0.791 - - - - - - 0.791 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
93. KCTD5 ENSGALG00000006423 192 0.791 - - - - - - 0.791 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
94. MEAF6 ENSGALG00000002013 2208 0.791 - - - - - - 0.791 - - - MYST/Esa1 associated factor 6 [Source:NCBI gene;Acc:419617]
95. TEKT4 ENSGALG00000005247 20 0.79 - - - - - - - 0.790 - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
96. E2F3 ENSGALG00000012680 21 0.79 - - - - - - - - - 0.790 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
97. ZFYVE26 ENSGALG00000028762 18 0.79 - - - - - - - 0.790 - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
98. GABBR2 ENSGALG00000013200 176 0.789 - - - - - - - 0.789 - - gamma-aminobutyric acid type B receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:4507]
99. SNORD2 SNORD2 51 0.789 - - - - - - 0.789 - - -
100. SNORA17 SNORA17 39 0.788 - - - - - - - 0.788 - -

There are 150 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA