Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for GABRA3

Gene Name Gene ID Reads Annotation
GABRA3 ENSDARG00000090883 5 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]










Genes with expression patterns similar to GABRA3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. GABRA3 ENSDARG00000090883 5 7 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
2. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 2.771 - 1.000 1.000 - - 0.771 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
3. si:ch211-243a22.1 si:ch211-243a22.1 42 2 - 1.000 - - - 1.000 - - -
4. si:ch211-274k16.6 si:ch211-274k16.6 26 2 - - - - - 1.000 - - 1.000
5. si:dkeyp-104b3.21 ENSDARG00000103964 6 2 - - - - - 1.000 - - 1.000 si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
6. CU896645.1 CU896645.1 10 2 1.000 - - - - 1.000 - - -
7. galr1 galr1 9 2 - 1.000 - - - - - - 1.000
8. tceanc2 ENSDARG00000062919 32 2 1.000 - - - - 1.000 - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
9. zgc:165409_1 ENSDARG00000091385 65 2 1.000 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
10. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 2 1.000 - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
11. BX927122.3 BX927122.3 19 2 - 1.000 - - - 1.000 - - -
12. si:ch73-92e20.2 si:ch73-92e20.2 2 2 - 1.000 1.000 - - - - - -
13. gpr12 ENSDARG00000062934 7 2 1.000 - - - - 1.000 - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
14. LRFN4_1 LRFN4_1 5 2 - 1.000 1.000 - - - - - -
15. nid2b ENSDARG00000009471 4 2 - 1.000 - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
16. si:ch211-108c6.2 14 2 - 1.000 - - - 1.000 - - - si:ch211-108c6.2
17. PPAPDC3 PPAPDC3 14 2 - - - - - 1.000 - - 1.000
18. PCDH10 PCDH10 7 2 - 1.000 - - - 1.000 - - -
19. PHKA1 PHKA1 10 2 - - 1.000 - - 1.000 - - -
20. LRRK1_1 LRRK1_1 11 2 - 1.000 - - - 1.000 - - -
21. itih6 ENSDARG00000056037 3 2 - 1.000 1.000 - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
22. ncanb ENSDARG00000005783 22 1.976 1.000 - - 0.976 - - - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
23. aspscr1_1 ENSDARG00000105321 4 1.929 1.000 - 0.929 - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
24. cd74b ENSDARG00000036628 8 1.896 - - 0.907 0.989 - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
25. fam43b ENSDARG00000070222 92 1.877 0.877 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
26. ca10b ENSDARG00000009568 8 1.867 - 1.000 0.867 - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
27. si:dkey-13m3.2 ENSDARG00000103424 15 1.859 - - 1.000 - - - - - 0.859 si:dkey-13m3.2 [Source:ZFIN;Acc:ZDB-GENE-121214-42]
28. CU694372.1 ENSDARG00000097988 105 1.855 0.855 - - - - 1.000 - - -
29. fermt3a fermt3a 56 1.852 - 1.000 0.852 - - - - - -
30. si:ch211-57m13.9 ENSDARG00000095884 10 1.839 0.839 1.000 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
31. AL935272.2 AL935272.2 37 1.826 1.000 - - - - 0.826 - - -
32. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.819 0.819 - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
33. si:ch211-207l22.2 si:ch211-207l22.2 1 1.806 - - - - 0.806 1.000 - - -
34. si:ch211-93g21.1 ENSDARG00000093602 5 1.806 - - - - 0.806 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
35. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1.806 - - - - 0.806 1.000 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
36. CABZ01031627.2 CABZ01031627.2 1 1.806 - - - - 0.806 1.000 - - -
37. rpz3 ENSDARG00000069728 11 1.806 - - - - 0.806 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
38. pcdh15b ENSDARG00000008127 2 1.806 - - - - 0.806 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
39. TMEM150B TMEM150B 1 1.806 - - - - 0.806 - - - 1.000
40. mcm5_1 ENSDARG00000019507 10 1.805 - 1.000 - - - - - - 0.805 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
41. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.803 - 1.000 0.803 - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
42. gpc2 ENSDARG00000104217 10 1.791 - 1.000 0.791 - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
43. si:rp71-36a1.3 ENSDARG00000071662 2 1.78 - 1.000 0.780 - - - - - - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
44. polg ENSDARG00000060951 33 1.766 - - - - 0.766 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
45. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.754 - 1.000 - - - 0.754 - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
46. si:dkey-109j17.5 ENSDARG00000104891 2 1.744 - - - - - 1.000 - - 0.744 si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
47. cacng8b ENSDARG00000070626 176 1.744 0.950 0.794 - - - - - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
48. cep89 ENSDARG00000005092 4 1.744 - - - - - 1.000 - - 0.744 centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
49. si:dkey-71b5.6 ENSDARG00000098861 12 1.74 - 1.000 - 0.740 - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
50. nitr3a_1 ENSDARG00000110676 44 1.739 0.739 - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
51. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1.737 - - 0.737 - - 1.000 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
52. pdcl ENSDARG00000009480 12 1.734 1.000 0.734 - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
53. n6amt2 7 1.717 - 1.000 - 0.717 - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
54. SMARCA4 ENSDARG00000104339 48 1.717 - 1.000 - - - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
55. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1.714 - 0.774 - 0.940 - - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
56. C3H19orf66 C3H19orf66 20 1.712 - - - 0.712 - 1.000 - - -
57. GBGT1_1 GBGT1_1 19 1.712 - - 0.712 - - 1.000 - - -
58. CABZ01076817.1 CABZ01076817.1 4 1.697 - - 0.891 - 0.806 - - - -
59. si:ch211-79g12.1 ENSDARG00000116692 2 1.673 - - 0.867 - 0.806 - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
60. fat3a ENSDARG00000033840 902 1.672 0.792 0.880 - - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
61. FP017279.3 FP017279.3 31 1.665 0.887 - - 0.778 - - - - -
62. CU151895.1 CU151895.1 103 1.664 0.819 - - - - 0.845 - - -
63. xkr7 ENSDARG00000026333 18 1.656 0.781 0.875 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
64. sstr1a ENSDARG00000104922 22 1.65 - - - 0.772 - 0.878 - - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
65. nhlh2 ENSDARG00000025495 1860 1.634 0.805 0.829 - - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
66. pax7b ENSDARG00000070818 282 1.601 - 0.866 - - - 0.735 - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
67. si:ch73-127m5.1 ENSDARG00000060680 253 1.601 0.721 - - - - 0.880 - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
68. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.6 0.755 - - - - 0.845 - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
69. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.589 - - 0.822 - - - - - 0.767 shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
70. DDO_1 DDO_1 5 1.588 - - - - 0.806 - - - 0.782
71. dab1a ENSDARG00000059939 46 1.576 - 0.734 - 0.842 - - - - - Dab, reelin signal transducer, homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060528-1]
72. si:dkey-16p19.3 si:dkey-16p19.3 119 1.549 0.778 - - - - 0.771 - - -
73. BX324131.3 BX324131.3 278 1.532 - 0.760 - - - 0.772 - - -
74. si:ch73-234b20.4 112 1.531 0.809 - - - - 0.722 - - - si:ch73-234b20.4, transcript variant X1
75. sycp1 ENSDARG00000003904 8 1.524 - - 0.780 - - - - - 0.744 synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
76. grm2a ENSDARG00000004150 64 1.507 - - 0.736 - - 0.771 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
77. ANO8 ANO8 380 1.504 0.707 - - - - 0.797 - - -
78. THAP6 THAP6 57 1.476 0.768 - - - - 0.708 - - -
79. irx5b ENSDARG00000074070 459 1.446 0.720 0.726 - - - - - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
80. crygm2f ENSDARG00000078134, ENSDARG00000112285 2 1 - - - - - - - - 1.000 crystallin, gamma M2f [Source:ZFIN;Acc:ZDB-GENE-080220-17]
81. si:dkeyp-51f12.3 ENSDARG00000091904 1 1 - - - - - - - - 1.000 si:dkeyp-51f12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-547]
82. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
83. si:rp71-1k13.6 ENSDARG00000115843 0 1 - - - - - - - - 1.000 si:rp71-1k13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-52]
84. BX571823.1 BX571823.1 2 1 - - 1.000 - - - - - -
85. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - - - 1.000 - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
86. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
87. ZNF337_19 ZNF337_19 3 1 - - - - 1.000 - - - -
88. si:ch211-197k17.3 ENSDARG00000096214 2 1 1.000 - - - - - - - - si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
89. grapb ENSDARG00000022668 6 1 - - - - - 1.000 - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
90. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
91. serinc2l ENSDARG00000053425 5 1 - - 1.000 - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
92. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
93. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
94. CR788320.1 CR788320.1 1 1 - - - - - 1.000 - - -
95. C24H11orf65 C24H11orf65 1 1 - 1.000 - - - - - - -
96. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
97. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
98. olfcg9 ENSDARG00000105189 1 1 - - - - - 1.000 - - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
99. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
100. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]

There are 1358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA