Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GABRA3

Gene Name Gene ID Reads Annotation
GABRA3 ENSGALG00000007269 985 gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]











Genes with expression patterns similar to GABRA3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GABRA3 ENSGALG00000007269 985 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
2. RTN1 ENSGALG00000012006 2438 2.367 - - - - 0.814 0.770 - - 0.783 - reticulon 1 [Source:NCBI gene;Acc:378791]
3. NSG1 ENSGALG00000015010 5829 1.652 - - - - - 0.812 - - 0.840 - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
4. ASTN1 ENSGALG00000004472 855 1.652 - - - - - 0.836 - - 0.816 - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
5. SMPD3 ENSGALG00000034950 4335 1.609 - - - - 0.852 0.757 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
6. NFASC ENSGALG00000031776 4264 1.605 - - - - - 0.757 - - 0.848 - neurofascin [Source:NCBI gene;Acc:419824]
7. MARCKSL1 ENSGALG00000032335 88728 1.546 - - - - - 0.749 - - 0.797 - MARCKS like 1 [Source:NCBI gene;Acc:770764]
8. ELOVL4 ENSGALG00000015876 853 1.534 - - - - - 0.737 - - 0.797 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
9. CFTR ENSGALG00000032986 424 1.533 - - - - 0.757 0.776 - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
10. SYT4 ENSGALG00000042626 384 1.525 - - - - - 0.706 - - 0.819 - synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
11. MAP2 ENSGALG00000002789 6597 1.501 - - - - - 0.757 - - 0.744 - microtubule associated protein 2, transcript variant X33
12. NEFL ENSGALG00000000314 4883 1.494 - - - - - 0.702 - - 0.792 - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
13. DPYSL4 ENSGALG00000010490 3431 1.485 - - - - - - - - 0.745 0.740 dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
14. BRSK2 ENSGALG00000006681 158 1.453 - - - - - 0.747 0.706 - - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
15. CRABP-I ENSGALG00000003193 67258 1.443 - - - 0.707 - 0.736 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
16. DACH1 ENSGALG00000037015 5648 1.423 - - - - 0.711 0.712 - - - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
17. MLLT11 ENSGALG00000044125 1470 0.868 - - - - - - - - - 0.868 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
18. LFNG ENSGALG00000038515 5178 0.857 - - - - - 0.857 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
19. GRM3 ENSGALG00000006576 474 0.851 - - - - - - - - 0.851 - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
20. LRP11 ENSGALG00000019987 3341 0.85 - - - - - - - - - 0.850 LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]
21. CXCR4 ENSGALG00000012357 1320 0.848 - - - - - 0.848 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
22. FABP7 ENSGALG00000038933 6780 0.844 - - - - - 0.844 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
23. INA ENSGALG00000028238 208 0.844 - - - - - - - - 0.844 - internexin neuronal intermediate filament protein alpha
24. MYT1 ENSGALG00000005932 2017 0.842 - - - - - - - - 0.842 - myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
25. GAP43 ENSGALG00000015089 505 0.835 - - - - - - - - 0.835 - growth associated protein 43 [Source:NCBI gene;Acc:427955]
26. HMGCS1 ENSGALG00000014862 2846 0.83 - - - - - - - - 0.830 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
27. ISL1 ENSGALG00000014884 7666 0.829 - - - - - - - - 0.829 - ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
28. HOXB-7 HOXB-7 2066 0.829 - - - - 0.829 - - - - -
29. ACAT2 ENSGALG00000011659 12825 0.827 - - - - - - - - 0.827 - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
30. DENND5B 4077 0.823 - - - - - 0.823 - - - - DENN domain containing 5B, transcript variant X1
31. CP49 CP49 113 0.823 - - - - - 0.823 - - - -
32. ZFHX3 ENSGALG00000000713 2340 0.82 - - - - - - - - - 0.820 zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
33. NDP ENSGALG00000016222 1067 0.819 - - - - 0.819 - - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
34. PKDCCB ENSGALG00000011166 74 0.817 - - - - - - - - - 0.817 protein kinase domain containing, cytoplasmic b
35. BTBD17 ENSGALG00000023359 87 0.817 - - - - - 0.817 - - - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
36. PDE4B ENSGALG00000011094 1871 0.816 - - - - - - - - 0.816 - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
37. NEFM ENSGALG00000000317 6992 0.816 - - - - - 0.816 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
38. GADD45 GADD45 8780 0.815 - - - - - - - - - 0.815
39. SRGAP3 ENSGALG00000008378 4331 0.814 - - - - - 0.814 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
40. EF1A EF1A 2378 0.814 - - - - - - - - 0.814 -
41. TUBB2B ENSGALG00000012821 41535 0.802 - - - - - - - - 0.802 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
42. STMN3 ENSGALG00000006130 151 0.8 - - - - - - - - 0.800 - stathmin 3 [Source:NCBI gene;Acc:419263]
43. GDI2 ENSGALG00000008169 67151 0.8 - - - - - - - - 0.800 - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
44. LIPG ENSGALG00000043734 2490 0.798 - - - - - 0.798 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
45. MMP17 3885 0.797 - - - - - - - - - 0.797 matrix metallopeptidase 17
46. RUSC2 ENSGALG00000002371 272 0.796 - - - - - - - - 0.796 - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
47. HOXD3 ENSGALG00000023420 2117 0.796 - - - - 0.796 - - - - - homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
48. SNAP25 ENSGALG00000009003 222 0.794 - - - - - - - - 0.794 - synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
49. CERCAM ENSGALG00000004986 5158 0.793 - - - - - 0.793 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
50. AP3B2 2331 0.793 - - - - - - - - - 0.793 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
51. CLEC18B ENSGALG00000027183 284 0.792 - - - - - 0.792 - - - - C-type lectin domain family 18 member B, transcript variant X2
52. C17orf75 ENSGALG00000003434 4262 0.792 - - - - - 0.792 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
53. ZIC3 ENSGALG00000031144 863 0.79 - - - - - 0.790 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
54. SIAT8C SIAT8C 178 0.789 - - - - - - - - 0.789 -
55. OPRL1 ENSGALG00000027965 53 0.789 - - - - - - - - 0.789 - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
56. HMP19 ENSGALG00000028602 1604 0.789 - - - - - - - - - 0.789 Gallus gallus HMP19 protein (HMP19), mRNA. [Source:RefSeq mRNA;Acc:NM_001326465]
57. NAT9 ENSGALG00000007723 2098 0.788 - - - - - - - - - 0.788 N-acetyltransferase 9 (putative), transcript variant X7
58. SLC5A7 ENSGALG00000016804 93 0.787 - - - - - - - - 0.787 - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
59. CACNG2 ENSGALG00000031977 196 0.786 - - - - - - - - 0.786 - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
60. CCDC6 ENSGALG00000003165 93 0.786 - - - - - 0.786 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
61. TPGS2 ENSGALG00000026547 1967 0.786 - - - - - - - - - 0.786 tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
62. GNG2 ENSGALG00000027629 9404 0.784 - - - - - - - - 0.784 - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
63. FAM134B 807 0.784 - - - - - - - - - 0.784 family with sequence similarity 134 member B, transcript variant X3
64. FASN ENSGALG00000040896 17372 0.784 - - - - - 0.784 - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
65. DRAXIN ENSGALG00000004631 3122 0.782 - - - - - 0.782 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
66. ENSGALG00000020376 ENSGALG00000020376 36 0.782 - - - - - 0.782 - - - -
67. ZIC1 ENSGALG00000040532 6543 0.781 - - - - - 0.781 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
68. FZD3 ENSGALG00000042308 3356 0.781 - - - - - 0.781 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
69. CMTM8 ENSGALG00000011484 2826 0.779 - - - - 0.779 - - - - - CKLF like MARVEL transmembrane domain containing 8 [Source:NCBI gene;Acc:420665]
70. GDE1 ENSGALG00000006916 1040 0.779 - - - - - - 0.779 - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
71. KIF1A ENSGALG00000006221 1989 0.778 - - - - - - - - - 0.778 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
72. ADCY8 ENSGALG00000030251 40 0.777 - - - - - 0.777 - - - - adenylate cyclase 8 [Source:HGNC Symbol;Acc:HGNC:239]
73. NGFR ENSGALG00000035950 13452 0.777 - - - - - - - - 0.777 - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
74. KIF21A ENSGALG00000007098 5919 0.776 - - - - 0.776 - - - - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
75. SCML4 ENSGALG00000015309 499 0.775 - - - - - - - - 0.775 - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
76. NME1 ENSGALG00000007305 152 0.775 - - - - - - 0.775 - - - NME/NM23 nucleoside diphosphate kinase 1 [Source:NCBI gene;Acc:422094]
77. UCH-L1 UCH-L1 12697 0.773 - - - - - - - - 0.773 -
78. LIMK1 ENSGALG00000001076 1931 0.772 - - - - - - - - - 0.772 LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
79. ANKRD13C ENSGALG00000031210 2152 0.772 - - - - - - - - - 0.772 ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
80. UNCX ENSGALG00000039292 165 0.771 - - - - - 0.771 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
81. GPN2 ENSGALG00000027909 5204 0.771 - - - - - - 0.771 - - - GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]
82. GHOX-7 GHOX-7 2555 0.77 - - - - - 0.770 - - - -
83. PRTG ENSGALG00000037336 34665 0.769 - - - - 0.769 - - - - - protogenin [Source:NCBI gene;Acc:415407]
84. DPYSL3 ENSGALG00000007582 7743 0.769 - - - - - - - - 0.769 - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
85. LRRC4C ENSGALG00000007948 9 0.769 - - - - - 0.769 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
86. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 0.768 - - - - - - 0.768 - - - notchless homolog 1, transcript variant X1
87. GNG10 ENSGALG00000015683 6905 0.765 - - - - - 0.765 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
88. ENSGALG00000024104 ENSGALG00000024104 1051 0.765 - - - - - - - - - 0.765
89. CREPT CREPT 17142 0.765 - - - - - - - - - 0.765
90. DCLK2 ENSGALG00000032386 2253 0.764 - - - - - 0.764 - - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
91. MAK ENSGALG00000012770 32 0.763 - - - - - 0.763 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
92. PLCH2 ENSGALG00000001207 7 0.763 - - - - - 0.763 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
93. PCDH8 ENSGALG00000036258 1945 0.762 - - - - - 0.762 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
94. MNR2 ENSGALG00000011349 3340 0.762 - - - - - - - - 0.762 - homeodomain protein
95. EMC7 ENSGALG00000009637 4969 0.761 - - - - - - - - - 0.761 ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
96. WNT4 ENSGALG00000041708 1277 0.76 - - - - - 0.760 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
97. HSPH1 ENSGALG00000017077 735 0.759 - - - - 0.759 - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
98. HOXA7 ENSGALG00000026989 6746 0.759 - - - - - - - - 0.759 - homeobox A7 [Source:NCBI gene;Acc:395290]
99. NKX-6.2 NKX-6.2 1370 0.758 - - - - - - - - 0.758 -
100. STMN2 ENSGALG00000039690 989 0.758 - - - - - - - - 0.758 - stathmin 2 [Source:NCBI gene;Acc:396095]

There are 210 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA