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Results for GABPB1

Gene Name Gene ID Reads Annotation
GABPB1 ENSGALG00000023440 5676 GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]











Genes with expression patterns similar to GABPB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GABPB1 ENSGALG00000023440 5676 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
2. NUP85 ENSGALG00000007974 21249 1.648 - - - - - - 0.850 0.798 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
3. SPCS1 ENSGALG00000001655 7718 1.609 - - - - - - 0.767 0.842 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
4. NDUFA12 ENSGALG00000011325 19807 1.606 - - - - - - 0.770 0.836 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
5. DAD1 ENSGALG00000035626 32604 1.606 - - - - - - 0.785 0.821 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
6. POMP ENSGALG00000017090 5504 1.601 - - - - - - 0.792 0.809 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
7. ASH2L ENSGALG00000003233 4814 1.6 - - - - - - 0.756 0.844 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
8. FANCL ENSGALG00000030022 7423 1.584 - - - - - - 0.787 0.797 - - FA complementation group L [Source:NCBI gene;Acc:421202]
9. PTPMT1 ENSGALG00000008091 6160 1.583 - - - - - - 0.797 0.786 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
10. HARS ENSGALG00000035080 11602 1.576 - - - - - - 0.820 0.756 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
11. RIOK2 ENSGALG00000015288 6280 1.562 - - - - - - 0.796 0.766 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
12. CTSL2 CTSL2 7966 1.559 - - - - - - 0.823 0.736 - -
13. C11H16ORF80 C11H16ORF80 18673 1.556 - - - - - - 0.827 0.729 - -
14. TRAPPC6B ENSGALG00000010157 7567 1.552 - - - - - - 0.769 0.783 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
15. C4orf27 C4orf27 16724 1.546 - - - - - - 0.708 0.838 - -
16. TRRAP ENSGALG00000003596 6032 1.543 - - - - - - 0.760 0.783 - - transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
17. R3HDM1 ENSGALG00000012246 6580 1.541 - - - - - - 0.818 0.723 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
18. DNAJA4 ENSGALG00000036850 6847 1.538 - - - - - - 0.701 0.837 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
19. WBSCR22 6082 1.536 - - - - - - 0.778 0.758 - - Williams-Beuren syndrome chromosome region 22
20. CCNH ENSGALG00000015641 8051 1.527 - - - - - - 0.788 0.739 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
21. COQ3 ENSGALG00000015486 3508 1.526 - - - - - - 0.748 0.778 - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
22. RRP1B ENSGALG00000035696 12309 1.52 - - - - - - 0.746 0.774 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
23. EXOSC10 ENSGALG00000003086 3223 1.513 - - - - - - 0.725 0.788 - - exosome component 10 [Source:NCBI gene;Acc:419454]
24. YRDC ENSGALG00000029001 6529 1.513 - - - - - - 0.716 0.797 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
25. ADSL ENSGALG00000012034 10280 1.511 - - - - - - 0.778 0.733 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
26. SDF2L1 ENSGALG00000031982 6084 1.51 - - - - - - 0.737 0.773 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
27. MRPL2 ENSGALG00000008597 16500 1.508 - - - - - - 0.722 0.786 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
28. MSANTD4 ENSGALG00000017177 3306 1.508 - - - - - - - 0.777 - 0.731 Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
29. QTRTD1 QTRTD1 10765 1.507 - - - - - - 0.740 0.767 - -
30. RPA3 ENSGALG00000010700 6212 1.503 - - - - - - 0.705 0.798 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
31. ASAP1 ENSGALG00000037618 2887 1.499 - - - - - - 0.783 - - 0.716 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
32. GLI2 ENSGALG00000011630 3347 1.499 - - - - - - 0.702 0.797 - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
33. MTG2 ENSGALG00000005164 3031 1.498 - - - - - - 0.793 0.705 - - mitochondrial ribosome associated GTPase 2 [Source:HGNC Symbol;Acc:HGNC:16239]
34. BPNT1 ENSGALG00000009576 7445 1.494 - - - - - - 0.746 0.748 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
35. CCNC ENSGALG00000015471 6497 1.49 - - - - - - 0.763 0.727 - - cyclin C [Source:NCBI gene;Acc:421791]
36. ACRC ACRC 2547 1.488 - - - - - - 0.759 0.729 - -
37. CCNDBP1 ENSGALG00000004837 11520 1.485 - - - - - - 0.777 0.708 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
38. SPDL1 ENSGALG00000001942 4403 1.482 - - - - - - 0.748 0.734 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
39. AZIN1 ENSGALG00000029295 11085 1.481 - - - - - - 0.710 0.771 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
40. NFYB ENSGALG00000041193 6158 1.478 - - - - - - 0.704 0.774 - - nuclear transcription factor Y subunit beta [Source:NCBI gene;Acc:396205]
41. FADS1 ENSGALG00000007127 5231 1.477 - - - - - - 0.752 0.725 - - fatty acid desaturase 1
42. DSCR3 3583 1.473 - - - - - - 0.726 0.747 - - DSCR3 arrestin fold containing, transcript variant X1
43. PHF5A ENSGALG00000011953 2395 1.473 - - - - - - - 0.748 - 0.725 PHD finger protein 5A [Source:NCBI gene;Acc:417991]
44. DIS3 ENSGALG00000016930 3696 1.465 - - - - - - - 0.720 - 0.745 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
45. CRLF3 ENSGALG00000003284 6002 1.459 - - - - - - 0.741 0.718 - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
46. SNX4 ENSGALG00000012052 11634 1.458 - - - - - - 0.734 0.724 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
47. HOXA5 ENSGALG00000025929 6231 1.457 - - - - - - 0.751 0.706 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
48. EVL ENSGALG00000011209 5440 1.454 - - - - - - - 0.711 - 0.743 Enah/Vasp-like [Source:NCBI gene;Acc:423453]
49. WDR3 ENSGALG00000014791 5856 1.453 - - - - - - 0.713 0.740 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
50. MTA3 ENSGALG00000009925 1914 1.447 - - - - - - 0.728 0.719 - - metastasis associated 1 family member 3 [Source:HGNC Symbol;Acc:HGNC:23784]
51. DNAJB9 ENSGALG00000009492 4868 1.447 - - - - - - 0.704 0.743 - - DnaJ heat shock protein family (Hsp40) member B9 [Source:NCBI gene;Acc:417783]
52. USP15 ENSGALG00000030024 2761 1.439 - - - - - - - 0.729 - 0.710 ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
53. DHX30 ENSGALG00000039830 5187 1.419 - - - - - - 0.711 0.708 - - DExH-box helicase 30 [Source:NCBI gene;Acc:420376]
54. COBRA1 COBRA1 4600 1.413 - - - - - - 0.711 0.702 - -
55. INTS12 ENSGALG00000010575 2976 1.412 - - - - - - 0.703 0.709 - - integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
56. PUS1 ENSGALG00000002354 10153 0.924 - - - - - - - 0.924 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
57. CHRAC1 ENSGALG00000040823 5695 0.886 - - - - - - - 0.886 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
58. TMEM167A ENSGALG00000027332 13862 0.876 - - - - - - 0.876 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
59. EIF5B ENSGALG00000016764 30681 0.874 - - - - - - - 0.874 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
60. ZADH2 ENSGALG00000022882 11790 0.87 - - - - - - - 0.870 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
61. CENPW ENSGALG00000027454 7517 0.859 - - - - - - 0.859 - - - centromere protein W [Source:NCBI gene;Acc:421716]
62. CHTF8 ENSGALG00000000632 7230 0.857 - - - - - - 0.857 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
63. ZSWIM7 ENSGALG00000023686 6459 0.852 - - - - - - 0.852 - - - zinc finger SWIM-type containing 7 [Source:NCBI gene;Acc:417596]
64. TMX3 ENSGALG00000013757 6387 0.847 - - - - - - 0.847 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
65. UTP18 ENSGALG00000002985 7129 0.846 - - - - - - - 0.846 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
66. KIAA0020 KIAA0020 14353 0.838 - - - - - - 0.838 - - -
67. TIMM13 ENSGALG00000028937 32013 0.835 - - - - - - - 0.835 - - translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
68. FARSB ENSGALG00000005236 10738 0.833 - - - - - - 0.833 - - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
69. NDUFS5 ENSGALG00000003625 27698 0.833 - - - - - - - 0.833 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
70. HCCS ENSGALG00000005571 4939 0.832 - - - - - - - 0.832 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
71. C1H21ORF91 ENSGALG00000028290 5550 0.831 - - - - - - - 0.831 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
72. SMDT1 ENSGALG00000011897 9360 0.831 - - - - - - 0.831 - - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
73. METTL23 ENSGALG00000001790 7906 0.83 - - - - - - 0.830 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
74. TMEM165 ENSGALG00000027886 5468 0.83 - - - - - - - 0.830 - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
75. STRN3 ENSGALG00000040464 9045 0.829 - - - - - - - 0.829 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
76. CCDC90B ENSGALG00000037072 5088 0.829 - - - - - - - 0.829 - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
77. ASNS ENSGALG00000009748 11822 0.828 - - - - - - - 0.828 - - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
78. UBE2V1 ENSGALG00000008015 17947 0.827 - - - - - - 0.827 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
79. RBM27 ENSGALG00000007516 3909 0.826 - - - - - - 0.826 - - - RNA binding motif protein 27, transcript variant X3
80. PCBP4 ENSGALG00000027695 7937 0.826 - - - - - - - 0.826 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
81. DNAJC3 ENSGALG00000016894 9048 0.825 - - - - - - 0.825 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
82. NCBP2_1 ENSGALG00000006843 7170 0.824 - - - - - - - 0.824 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
83. UCHL3 ENSGALG00000016921 16208 0.824 - - - - - - 0.824 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
84. MRPL30 ENSGALG00000016760 16965 0.823 - - - - - - 0.823 - - - mitochondrial ribosomal protein L30
85. SUV39H2 ENSGALG00000013920 4360 0.823 - - - - - - - 0.823 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
86. RCOR3 ENSGALG00000009871 7022 0.821 - - - - - - 0.821 - - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
87. DCAF12 ENSGALG00000005800 6419 0.821 - - - - - - 0.821 - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
88. PREP ENSGALG00000015405 17050 0.821 - - - - - - 0.821 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
89. SRSF5 ENSGALG00000009421 8502 0.82 - - - - - - - 0.820 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
90. GCSH ENSGALG00000032679 29231 0.82 - - - - - - - 0.820 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
91. HELLS ENSGALG00000005451 7094 0.82 - - - - - - - 0.820 - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
92. NELL2 ENSGALG00000009601 4243 0.819 - - - - - - - 0.819 - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
93. TK2 ENSGALG00000034216 5394 0.818 - - - - - - 0.818 - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
94. METTL14 ENSGALG00000012000 5876 0.818 - - - - - - 0.818 - - - methyltransferase like 14 [Source:NCBI gene;Acc:422684]
95. HNRNPD ENSGALG00000011184 10686 0.817 - - - - - - 0.817 - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
96. CTNNBL1 ENSGALG00000006817 6765 0.816 - - - - - - - 0.816 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
97. LGALS1 ENSGALG00000012420 13993 0.815 - - - - - - 0.815 - - - galectin 1 [Source:NCBI gene;Acc:396491]
98. NDUFB3 ENSGALG00000008239 15511 0.815 - - - - - - 0.815 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
99. PSMD3 ENSGALG00000033162 25615 0.815 - - - - - - 0.815 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
100. CLSPN ENSGALG00000002346 2590 0.814 - - - - - - - 0.814 - - claspin [Source:NCBI gene;Acc:428223]

There are 765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA