Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for G3BP1

Gene Name Gene ID Reads Annotation
G3BP1 ENSGALG00000004160 36795 G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]











Genes with expression patterns similar to G3BP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. G3BP1 ENSGALG00000004160 36795 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
2. GSPT1 15580 2.459 - - - - 0.893 - 0.723 0.843 - - G1 to S phase transition 1, transcript variant X1
3. EIF3B ENSGALG00000040999 49971 2.286 - 0.703 - - 0.799 - 0.784 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
4. ELOVL5 ENSGALG00000016314 18163 1.799 - - - - 0.912 - 0.887 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
5. DR1 ENSGALG00000005858 8016 1.773 - - - - - - 0.837 0.936 - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
6. LZIC ENSGALG00000002616 9052 1.76 - - - - 0.857 - - 0.903 - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
7. DPP9 ENSGALG00000004200 4515 1.724 - - - - - - 0.790 0.934 - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
8. GABARAPL2 ENSGALG00000003208 9195 1.661 - - - - 0.851 - - 0.810 - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
9. COMMD2 ENSGALG00000028001 18981 1.658 - - - - 0.878 - - 0.780 - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
10. CHMP5 ENSGALG00000013160 13347 1.655 - - - - 0.886 - 0.769 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
11. SRP19 ENSGALG00000000218 14207 1.655 - - - - 0.892 - 0.763 - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
12. DNAJC9 ENSGALG00000002701 19249 1.654 - - - - 0.851 - 0.803 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
13. WDR70 ENSGALG00000003708 5835 1.636 - - - - - - 0.708 0.928 - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
14. TMEM128 ENSGALG00000014992 6567 1.632 - - 0.703 - - - - 0.929 - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
15. Mar-05 Mar-05 6330 1.629 - - - - 0.884 - 0.745 - - -
16. SREK1 ENSGALG00000014775 13961 1.624 - - - - 0.854 - 0.770 - - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
17. ZC3H6 ENSGALG00000008269 10353 1.622 - - - - 0.886 - 0.736 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
18. PRCC ENSGALG00000040696 9346 1.621 - - - - 0.871 - 0.750 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
19. RAD23B ENSGALG00000015540 10828 1.618 - - - - 0.875 - 0.743 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
20. ZADH2 ENSGALG00000022882 11790 1.596 - - - - 0.764 - 0.832 - - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
21. NEK6 ENSGALG00000001118 20333 1.58 - - - - 0.872 - 0.708 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
22. RPL22 ENSGALG00000000719 74238 1.578 - - - - 0.870 - 0.708 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
23. NXN 20202 1.576 - - - - - - 0.773 0.803 - - nucleoredoxin, transcript variant X1
24. RNF4 ENSGALG00000015668 15780 1.574 - - 0.710 - 0.864 - - - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
25. EIF4E ENSGALG00000042112 27720 1.558 - - - - - - 0.724 0.834 - - eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
26. ENO1 ENSGALG00000002377 251226 1.506 - 0.748 - - 0.758 - - - - - enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
27. RPA2 39663 1.497 - - - - - 0.749 0.748 - - - replication protein A2
28. NIPSNAP3L ENSGALG00000027334 7514 1.466 - - 0.717 - - - 0.749 - - - nipsnap homolog 3-like
29. YWHAZ ENSGALG00000031387 84985 1.444 - - - - 0.701 - 0.743 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
30. SUMO2 ENSGALG00000007971 46283 1.425 - - - - 0.714 0.711 - - - - small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:770125]
31. LDHB ENSGALG00000035836 169726 1.415 - 0.707 - - - - - 0.708 - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
32. TRAPPC8 ENSGALG00000015157 4308 0.937 - - - - - - - 0.937 - - trafficking protein particle complex 8, transcript variant X5
33. PDAP1 ENSGALG00000036552 28881 0.937 - - - - - - - 0.937 - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
34. RWDD1 ENSGALG00000014953 9986 0.936 - - - - - - - 0.936 - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
35. CCDC101 CCDC101 9111 0.934 - - - - - - - 0.934 - -
36. SLC25A33 ENSGALG00000002519 4173 0.934 - - - - - - - 0.934 - - solute carrier family 25 member 33 [Source:HGNC Symbol;Acc:HGNC:29681]
37. CHMP7 ENSGALG00000000409 8967 0.933 - - - - - - - 0.933 - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
38. GSTK1 ENSGALG00000014708 4687 0.933 - - - - - - - 0.933 - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
39. CMIP ENSGALG00000038494 5016 0.933 - - - - - - - 0.933 - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
40. SEC23A_1 ENSGALG00000010150 14745 0.933 - - - - - - - 0.933 - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
41. SNRNP25 ENSGALG00000026559 2097 0.932 - - - - - - - 0.932 - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
42. ORAI2 ENSGALG00000001837 2528 0.932 - - - - - - - 0.932 - - ORAI calcium release-activated calcium modulator 2 [Source:NCBI gene;Acc:417509]
43. CSRNP1 ENSGALG00000027905 3141 0.932 - - - - - - - 0.932 - - cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
44. CHST10 ENSGALG00000016769 2472 0.931 - - - - - - - 0.931 - - carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:395206]
45. APCDD1 ENSGALG00000000894 1482 0.931 - - - - - - - 0.931 - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
46. PMM2 ENSGALG00000007326 8260 0.931 - - - - - - - 0.931 - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
47. ECHDC1 ENSGALG00000014828 958 0.93 - - - - - - - 0.930 - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
48. TCF15 ENSGALG00000026276 3646 0.93 - - - - - - - 0.930 - - transcription factor 15 [Source:NCBI gene;Acc:395788]
49. ENSGALG00000026592 ENSGALG00000026592 4331 0.93 - - - - - - - 0.930 - -
50. HIAT1 HIAT1 447 0.93 - - - - - - - 0.930 - -
51. NDUFA7 ENSGALG00000000629 14046 0.929 - - - - - - - 0.929 - - NADH:ubiquinone oxidoreductase subunit A7
52. MTFR1L ENSGALG00000000998 3457 0.929 - - - - - - - 0.929 - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
53. NCKAP1 ENSGALG00000002750 22749 0.928 - - - - - - - 0.928 - - NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
54. DCN ENSGALG00000011274 4166 0.928 - - - - - - - 0.928 - - decorin [Source:NCBI gene;Acc:417892]
55. KPNA2 ENSGALG00000003584 76058 0.925 - - - - 0.925 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
56. USPL1 ENSGALG00000017079 6263 0.922 - - - - - - - 0.922 - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
57. SCP2 ENSGALG00000010652 19563 0.92 - - - - - - - 0.920 - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
58. SELT SELT 25524 0.916 - - - - 0.916 - - - - -
59. MELK ENSGALG00000016438 9237 0.908 - - - - - - 0.908 - - - maternal embryonic leucine zipper kinase [Source:NCBI gene;Acc:428391]
60. CASP8AP2 ENSGALG00000015611 5657 0.906 - - - - - - - 0.906 - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
61. PLS3 ENSGALG00000005930 12625 0.902 - - - - - - - 0.902 - - plastin 3 [Source:NCBI gene;Acc:422222]
62. KIF23 ENSGALG00000008095 9919 0.899 - - - - - - - 0.899 - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
63. ANAPC16 ENSGALG00000004410 18001 0.896 - - - - - - 0.896 - - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
64. ACAT2 ENSGALG00000011659 12825 0.895 - - - - 0.895 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
65. PDIA6 ENSGALG00000016447 51308 0.895 - - - - - - 0.895 - - - protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
66. DENR ENSGALG00000003795 30805 0.894 - - - - 0.894 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
67. SLC16A1 ENSGALG00000001717 18566 0.894 - - - - 0.894 - - - - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
68. UBE2D3 ENSGALG00000012311 39831 0.892 - - - - 0.892 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
69. PSMD3 ENSGALG00000033162 25615 0.89 - - - - 0.890 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
70. SRGAP1 ENSGALG00000009825 6753 0.889 - - - - 0.889 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
71. BLMH ENSGALG00000004259 36907 0.888 - - - - - - 0.888 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
72. UPF3B ENSGALG00000008618 12350 0.887 - - - - 0.887 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
73. LIN28B ENSGALG00000026761 13314 0.886 - - - - - - 0.886 - - - lin-28 homolog B [Source:NCBI gene;Acc:421786]
74. PSMG3 ENSGALG00000004203 11240 0.886 - - - - 0.886 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
75. CCDC132 CCDC132 2632 0.886 - - - - 0.886 - - - - -
76. EIF3L ENSGALG00000012296 42627 0.884 - - - - - - 0.884 - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
77. LGMN ENSGALG00000010811 7401 0.881 - - - - 0.881 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
78. SLMO2 SLMO2 9207 0.881 - - - - 0.881 - - - - -
79. DLD ENSGALG00000007931 11011 0.881 - - - - 0.881 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
80. SPEN ENSGALG00000036932 9688 0.881 - - - - 0.881 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
81. PSME3 ENSGALG00000002937 41148 0.881 - - - - 0.881 - - - - - proteasome activator subunit 3 [Source:NCBI gene;Acc:420017]
82. MYBL2 ENSGALG00000003503 15875 0.881 - - - - 0.881 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
83. MINOS1 ENSGALG00000004039 37740 0.88 - - - - 0.880 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
84. TBL1X ENSGALG00000040006 28597 0.88 - - - - 0.880 - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
85. PBRM1 ENSGALG00000037455 6450 0.88 - - - - 0.880 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
86. DDX19B ENSGALG00000039967 49600 0.88 - - - - - - - 0.880 - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
87. FKBP12 FKBP12 64317 0.88 - - - - - - 0.880 - - -
88. SIKE1 ENSGALG00000002147 20836 0.878 - - - - - - 0.878 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
89. NUP88 ENSGALG00000032280 9847 0.878 - - - - 0.878 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
90. PURH PURH 28410 0.878 - - - - - - - 0.878 - -
91. PTP4A2 ENSGALG00000003265 24826 0.876 - - - - - - 0.876 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
92. TSPAN6 ENSGALG00000006808 20063 0.876 - - - - - - 0.876 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
93. HSF2 ENSGALG00000038420 5259 0.875 - - - - 0.875 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
94. CDCA7 ENSGALG00000040833 7484 0.874 - - - - 0.874 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
95. PPP3CA ENSGALG00000039498 9568 0.874 - - - - - - 0.874 - - - protein phosphatase 3 catalytic subunit alpha [Source:HGNC Symbol;Acc:HGNC:9314]
96. WDR92 ENSGALG00000008760 3934 0.873 - - - - 0.873 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
97. MRPL16 ENSGALG00000029419 8033 0.873 - - - - 0.873 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
98. GATC ENSGALG00000007195 8610 0.873 - - - - 0.873 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
99. ZDHHC6 ENSGALG00000008870 16575 0.873 - - - - 0.873 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
100. NUDCD2 ENSGALG00000001726 6303 0.872 - - - - - - - 0.872 - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]

There are 449 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA