Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Foxd3

Gene Name Gene ID Reads Annotation
Foxd3 ENSMUSG00000067261, ENSMUSG00000116152 168 forkhead box D3 [Source:MGI Symbol;Acc:MGI:1347473]







Genes with expression patterns similar to Foxd3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Foxd3 ENSMUSG00000067261, ENSMUSG00000116152 168 6 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box D3 [Source:MGI Symbol;Acc:MGI:1347473]
2. Grm2 ENSMUSG00000023192 147 0.858 - - 0.858 - - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
3. Scrt1 ENSMUSG00000048385 155 0.84 - - 0.840 - - - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
4. Gdap1 ENSMUSG00000025777 166 0.819 - - 0.819 - - - ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
5. Elavl3 ENSMUSG00000003410 2830 0.818 - - 0.818 - - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
6. Sncb ENSMUSG00000034891 53 0.804 - - 0.804 - - - synuclein, beta [Source:MGI Symbol;Acc:MGI:1889011]
7. Sox10 ENSMUSG00000033006 4908 0.799 0.799 - - - - - SRY (sex determining region Y)-box 10 [Source:MGI Symbol;Acc:MGI:98358]
8. Lhx5 ENSMUSG00000029595 102 0.794 - - 0.794 - - - LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
9. Eml5 ENSMUSG00000051166 180 0.792 - - 0.792 - - - echinoderm microtubule associated protein like 5 [Source:MGI Symbol;Acc:MGI:2442513]
10. Npr2 ENSMUSG00000028469 946 0.791 - - 0.791 - - - natriuretic peptide receptor 2 [Source:MGI Symbol;Acc:MGI:97372]
11. Phactr3 ENSMUSG00000027525 233 0.778 - - 0.778 - - - phosphatase and actin regulator 3 [Source:MGI Symbol;Acc:MGI:1921439]
12. Trp53i11 ENSMUSG00000068735 15944 0.777 - - 0.777 - - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
13. Insm1 ENSMUSG00000068154 480 0.776 - - 0.776 - - - insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
14. Id4 ENSMUSG00000021379 452 0.767 - - 0.767 - - - inhibitor of DNA binding 4 [Source:MGI Symbol;Acc:MGI:99414]
15. Fam171b ENSMUSG00000048388 2388 0.764 0.764 - - - - - family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]
16. Pex5l ENSMUSG00000027674 104 0.761 - - 0.761 - - - peroxisomal biogenesis factor 5-like [Source:MGI Symbol;Acc:MGI:1916672]
17. Foxb1 ENSMUSG00000059246 293 0.758 0.758 - - - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
18. Sox2ot ENSMUSG00000105265 475 0.757 - - 0.757 - - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
19. Celsr2 ENSMUSG00000068740 2010 0.754 - - 0.754 - - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
20. Fam210b ENSMUSG00000027495 1150 0.748 0.748 - - - - - family with sequence similarity 210, member B [Source:MGI Symbol;Acc:MGI:1914267]
21. Ap3b2 ENSMUSG00000062444 565 0.745 - - 0.745 - - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
22. Srgap3 ENSMUSG00000030257 2941 0.744 - - 0.744 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
23. RP24-312G4.2 RP24-312G4.2 350 0.743 - 0.743 - - - -
24. Sox21 ENSMUSG00000061517 464 0.742 0.742 - - - - - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
25. Neurod1 ENSMUSG00000034701 1390 0.74 - 0.740 - - - - neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
26. Hes6 ENSMUSG00000067071 1692 0.74 - - 0.740 - - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
27. Sox3 ENSMUSG00000045179 1137 0.74 0.740 - - - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
28. Rnf165 ENSMUSG00000025427 2394 0.738 - - 0.738 - - - ring finger protein 165 [Source:MGI Symbol;Acc:MGI:2444521]
29. Gprin1 ENSMUSG00000069227 1013 0.736 - - 0.736 - - - G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
30. Trim9 ENSMUSG00000021071 870 0.734 - - 0.734 - - - tripartite motif-containing 9 [Source:MGI Symbol;Acc:MGI:2137354]
31. Cotl1 ENSMUSG00000031827 4560 0.734 - - 0.734 - - - coactosin-like 1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1919292]
32. St18 ENSMUSG00000033740 408 0.734 - - 0.734 - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
33. Epha5 ENSMUSG00000029245 256 0.733 - - 0.733 - - - Eph receptor A5 [Source:MGI Symbol;Acc:MGI:99654]
34. Fgfbp3 ENSMUSG00000047632 2036 0.733 0.733 - - - - - fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
35. 9330159F19Rik ENSMUSG00000004360 464 0.733 - - 0.733 - - - RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
36. Ppp2r2c ENSMUSG00000029120 61 0.731 - - 0.731 - - - protein phosphatase 2, regulatory subunit B, gamma [Source:MGI Symbol;Acc:MGI:2442660]
37. Cxcr4 ENSMUSG00000045382 524 0.73 0.730 - - - - - chemokine (C-X-C motif) receptor 4 [Source:MGI Symbol;Acc:MGI:109563]
38. Bhlhe22 ENSMUSG00000025128 194 0.73 - 0.730 - - - - basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]
39. Nacad ENSMUSG00000041073 114 0.729 - - 0.729 - - - NAC alpha domain containing [Source:MGI Symbol;Acc:MGI:3603030]
40. 3110035E14Rik 204 0.726 - - 0.726 - - - RIKEN cDNA 3110035E14 gene
41. Trim67 ENSMUSG00000036913 70 0.725 - - 0.725 - - - tripartite motif-containing 67 [Source:MGI Symbol;Acc:MGI:3045323]
42. Soga3 ENSMUSG00000038916 3972 0.724 - - 0.724 - - - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
43. Gm16551 ENSMUSG00000066477 147 0.723 - - 0.723 - - - predicted gene 16551 [Source:MGI Symbol;Acc:MGI:4414971]
44. Scg3 ENSMUSG00000032181 445 0.721 - - 0.721 - - - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
45. Gpr98 Gpr98 1797 0.72 0.720 - - - - -
46. Sst ENSMUSG00000004366 517 0.719 0.719 - - - - - somatostatin [Source:MGI Symbol;Acc:MGI:98326]
47. Ppp1r14a ENSMUSG00000037166 745 0.717 - - 0.717 - - - protein phosphatase 1, regulatory inhibitor subunit 14A [Source:MGI Symbol;Acc:MGI:1931139]
48. Phf21b ENSMUSG00000016624 849 0.716 - - 0.716 - - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
49. Gm12224 ENSMUSG00000085888 7 0.716 - - 0.716 - - - predicted gene 12224 [Source:MGI Symbol;Acc:MGI:3651369]
50. A930011O12Rik A930011O12Rik 359 0.715 - - 0.715 - - -
51. Gm20501 ENSMUSG00000092536 57 0.711 - - 0.711 - - - predicted gene 20501 [Source:MGI Symbol;Acc:MGI:5141966]
52. Acsbg1 ENSMUSG00000032281 33 0.71 - - 0.710 - - - acyl-CoA synthetase bubblegum family member 1 [Source:MGI Symbol;Acc:MGI:2385656]
53. Nhlh1 ENSMUSG00000051251 2017 0.71 - - 0.710 - - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
54. Cplx1 ENSMUSG00000033615 94 0.708 - - 0.708 - - - complexin 1 [Source:MGI Symbol;Acc:MGI:104727]
55. Ncan ENSMUSG00000002341 521 0.708 - - 0.708 - - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
56. Nes ENSMUSG00000004891 8017 0.706 - - 0.706 - - - nestin [Source:MGI Symbol;Acc:MGI:101784]
57. Nfasc ENSMUSG00000026442 356 0.705 - - 0.705 - - - neurofascin [Source:MGI Symbol;Acc:MGI:104753]
58. Myo16 ENSMUSG00000039057 160 0.705 - - 0.705 - - - myosin XVI [Source:MGI Symbol;Acc:MGI:2685951]
59. Ednrb ENSMUSG00000022122 1909 0.704 0.704 - - - - - endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
60. Rhbdl3 ENSMUSG00000017692 783 0.701 - - 0.701 - - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
61. Bhlhe23 ENSMUSG00000045493 61 0.701 - - 0.701 - - - basic helix-loop-helix family, member e23 [Source:MGI Symbol;Acc:MGI:2153710]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA