Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Foxd1

Gene Name Gene ID Reads Annotation
Foxd1 ENSMUSG00000078302 2176 forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]







Genes with expression patterns similar to Foxd1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Foxd1 ENSMUSG00000078302 2176 6 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]
2. Meox1 ENSMUSG00000001493 3105 3.248 0.892 - - 0.714 0.829 0.813 mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
3. Myh3 ENSMUSG00000020908 1729 3.18 - 0.799 - 0.729 0.794 0.858 myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
4. Dmrt2 ENSMUSG00000048138 949 3.17 0.729 0.832 0.778 - - 0.831 doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
5. Fibin ENSMUSG00000074971 907 3.076 0.768 0.737 - - 0.826 0.745 fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
6. C1qtnf3 ENSMUSG00000058914 1227 3.016 - 0.742 - 0.780 0.762 0.732 C1q and tumor necrosis factor related protein 3 [Source:MGI Symbol;Acc:MGI:1932136]
7. Foxc1 ENSMUSG00000050295 5789 2.35 - 0.800 - - 0.750 0.800 forkhead box C1 [Source:MGI Symbol;Acc:MGI:1347466]
8. Col2a1 ENSMUSG00000022483 6073 2.34 0.858 0.771 - 0.711 - - collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]
9. Myl1 ENSMUSG00000061816 2895 2.335 - 0.755 - 0.773 0.807 - myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
10. Ntn1 ENSMUSG00000020902 1175 2.332 0.757 0.787 - - 0.788 - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
11. Rbm24 ENSMUSG00000038132 634 2.311 0.769 0.804 - - 0.738 - RNA binding motif protein 24 [Source:MGI Symbol;Acc:MGI:3610364]
12. Nkd2 ENSMUSG00000021567 1510 2.241 - 0.753 - - 0.744 0.744 naked cuticle 2 [Source:MGI Symbol;Acc:MGI:1919543]
13. Pax9 ENSMUSG00000001497 255 2.23 0.748 0.777 - - - 0.705 paired box 9 [Source:MGI Symbol;Acc:MGI:97493]
14. Ttn ENSMUSG00000051747 3015 2.21 - - - 0.705 0.801 0.704 titin [Source:MGI Symbol;Acc:MGI:98864]
15. Cdh15 ENSMUSG00000031962 318 2.205 0.704 0.774 - - - 0.727 cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
16. Uncx ENSMUSG00000029546 4593 1.659 0.782 0.877 - - - - UNC homeobox [Source:MGI Symbol;Acc:MGI:108013]
17. Hoxc8 ENSMUSG00000001657 16443 1.587 - - 0.782 0.805 - - homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
18. Tcf15 ENSMUSG00000068079 1156 1.584 0.738 0.846 - - - - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
19. Synpo2l ENSMUSG00000039376 565 1.577 - 0.766 - - - 0.811 synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
20. Mylpf ENSMUSG00000030672 5024 1.567 - - - 0.772 0.795 - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
21. Cdkn1a ENSMUSG00000023067 2571 1.564 0.822 0.742 - - - - cyclin-dependent kinase inhibitor 1A (P21) [Source:MGI Symbol;Acc:MGI:104556]
22. Lpar1 ENSMUSG00000038668 2064 1.558 - 0.770 0.788 - - - lysophosphatidic acid receptor 1 [Source:MGI Symbol;Acc:MGI:108429]
23. Tcf4 ENSMUSG00000053477 16999 1.514 - - 0.799 0.715 - - transcription factor 4 [Source:MGI Symbol;Acc:MGI:98506]
24. Tnnt2 ENSMUSG00000026414 1982 1.504 - 0.756 - - 0.748 - troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
25. Cbr2 ENSMUSG00000025150 318 1.487 - 0.778 - 0.709 - - carbonyl reductase 2 [Source:MGI Symbol;Acc:MGI:107200]
26. Myl4 ENSMUSG00000061086 819 1.474 - - - 0.703 0.771 - myosin, light polypeptide 4 [Source:MGI Symbol;Acc:MGI:97267]
27. Neb ENSMUSG00000026950 948 1.461 - - 0.710 - 0.751 - nebulin [Source:MGI Symbol;Acc:MGI:97292]
28. Tnnt1 ENSMUSG00000064179 836 1.46 - 0.746 - 0.714 - - troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
29. Pax1 ENSMUSG00000037034 2297 0.842 - 0.842 - - - - paired box 1 [Source:MGI Symbol;Acc:MGI:97485]
30. Arpp21 ENSMUSG00000032503 375 0.816 0.816 - - - - - cyclic AMP-regulated phosphoprotein, 21 [Source:MGI Symbol;Acc:MGI:107562]
31. Myog ENSMUSG00000026459 855 0.805 0.805 - - - - - myogenin [Source:MGI Symbol;Acc:MGI:97276]
32. Myf5 ENSMUSG00000000435 593 0.8 0.800 - - - - - myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]
33. Ebf2 ENSMUSG00000022053 834 0.782 0.782 - - - - - early B cell factor 2 [Source:MGI Symbol;Acc:MGI:894332]
34. Six1 ENSMUSG00000051367 745 0.772 0.772 - - - - - sine oculis-related homeobox 1 [Source:MGI Symbol;Acc:MGI:102780]
35. Lrig3 ENSMUSG00000020105 2166 0.758 - - - 0.758 - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:MGI Symbol;Acc:MGI:2443955]
36. Fap ENSMUSG00000000392 275 0.752 0.752 - - - - - fibroblast activation protein [Source:MGI Symbol;Acc:MGI:109608]
37. Fat3 ENSMUSG00000074505 655 0.751 0.751 - - - - - FAT atypical cadherin 3 [Source:MGI Symbol;Acc:MGI:2444314]
38. Tppp3 ENSMUSG00000014846 3267 0.751 0.751 - - - - - tubulin polymerization-promoting protein family member 3 [Source:MGI Symbol;Acc:MGI:1915221]
39. Hfe2 ENSMUSG00000038403 372 0.747 - - - - - 0.747 hemochromatosis type 2 (juvenile) [Source:MGI Symbol;Acc:MGI:1916835]
40. Arg1 ENSMUSG00000019987 923 0.739 - - - - - 0.739 arginase, liver [Source:MGI Symbol;Acc:MGI:88070]
41. Spon1 ENSMUSG00000038156 1709 0.738 - 0.738 - - - - spondin 1, (f-spondin) extracellular matrix protein [Source:MGI Symbol;Acc:MGI:2385287]
42. Sox9 ENSMUSG00000000567 6545 0.728 - 0.728 - - - - SRY (sex determining region Y)-box 9 [Source:MGI Symbol;Acc:MGI:98371]
43. Srl ENSMUSG00000022519 577 0.727 - - - - 0.727 - sarcalumenin [Source:MGI Symbol;Acc:MGI:2146620]
44. Meox2 ENSMUSG00000036144 343 0.726 - - - - 0.726 - mesenchyme homeobox 2 [Source:MGI Symbol;Acc:MGI:103219]
45. Tnnc1 ENSMUSG00000091898 572 0.725 - - - - - 0.725 troponin C, cardiac/slow skeletal [Source:MGI Symbol;Acc:MGI:98779]
46. Grin3a ENSMUSG00000039579 433 0.724 - - - - 0.724 - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
47. Top1 ENSMUSG00000070544 27667 0.722 - - 0.722 - - - topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
48. Casq2 ENSMUSG00000027861 587 0.721 - 0.721 - - - - calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
49. Tnnc2 ENSMUSG00000017300 2196 0.721 0.721 - - - - - troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
50. Acta1 ENSMUSG00000031972 1386 0.717 - - - - 0.717 - actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
51. Sema6a ENSMUSG00000019647 5014 0.716 - - - - - 0.716 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:MGI Symbol;Acc:MGI:1203727]
52. Wnt16 ENSMUSG00000029671 196 0.716 - 0.716 - - - - wingless-type MMTV integration site family, member 16 [Source:MGI Symbol;Acc:MGI:2136018]
53. Mef2c ENSMUSG00000005583 2710 0.715 0.715 - - - - - myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458]
54. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 13087 0.715 - - 0.715 - - - serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
55. Ebf1 ENSMUSG00000057098 3112 0.715 0.715 - - - - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
56. AI646519 ENSMUSG00000087521 162 0.715 - - - - - 0.715 expressed sequence AI646519 [Source:MGI Symbol;Acc:MGI:2139024]
57. Actc1 ENSMUSG00000068614 13555 0.715 - - - - 0.715 - actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
58. Ryr1 ENSMUSG00000030592 284 0.709 - 0.709 - - - - ryanodine receptor 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:99659]
59. 2310002L09Rik ENSMUSG00000028396 135 0.709 - - - - 0.709 - RIKEN cDNA 2310002L09 gene [Source:MGI Symbol;Acc:MGI:1916780]
60. Hsph1 ENSMUSG00000029657 19023 0.708 - - 0.708 - - - heat shock 105kDa/110kDa protein 1 [Source:MGI Symbol;Acc:MGI:105053]
61. 1110059M19Rik 1110059M19Rik 242 0.708 - - - - 0.708 -
62. Car3 ENSMUSG00000027559 550 0.703 0.703 - - - - - carbonic anhydrase 3 [Source:MGI Symbol;Acc:MGI:88270]
63. Col9a1 ENSMUSG00000026147 4752 0.702 - 0.702 - - - - collagen, type IX, alpha 1 [Source:MGI Symbol;Acc:MGI:88465]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA