Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Farsa

Gene Name Gene ID Reads Annotation
Farsa ENSMUSG00000003808 3225 phenylalanyl-tRNA synthetase, alpha subunit [Source:MGI Symbol;Acc:MGI:1913840]







Genes with expression patterns similar to Farsa

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Farsa ENSMUSG00000003808 3225 6 1.000 1.000 1.000 1.000 1.000 1.000 phenylalanyl-tRNA synthetase, alpha subunit [Source:MGI Symbol;Acc:MGI:1913840]
2. Immp1l ENSMUSG00000042670 2132 0.961 0.961 - - - - - IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913791]
3. Actn1 ENSMUSG00000015143 10506 0.957 0.957 - - - - - actinin, alpha 1 [Source:MGI Symbol;Acc:MGI:2137706]
4. Bcl7a ENSMUSG00000029438 7947 0.945 0.945 - - - - - B cell CLL/lymphoma 7A [Source:MGI Symbol;Acc:MGI:1924295]
5. Fam168a ENSMUSG00000029461 5610 0.928 0.928 - - - - - family with sequence similarity 168, member A [Source:MGI Symbol;Acc:MGI:2442372]
6. Rps6ka6 ENSMUSG00000025665, ENSMUSG00000116203 6507 0.923 0.923 - - - - - ribosomal protein S6 kinase polypeptide 6 [Source:MGI Symbol;Acc:MGI:1914321]
7. Hbp1 ENSMUSG00000002996 4468 0.92 0.920 - - - - - high mobility group box transcription factor 1 [Source:MGI Symbol;Acc:MGI:894659]
8. Gpi1 ENSMUSG00000036427 9343 0.919 0.919 - - - - - glucose phosphate isomerase 1 [Source:MGI Symbol;Acc:MGI:95797]
9. Mar-05 Mar-05 5896 0.915 0.915 - - - - -
10. Kdm4b ENSMUSG00000024201 1440 0.914 0.914 - - - - - lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
11. Arhgef6 ENSMUSG00000031133 320 0.914 0.914 - - - - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:1920591]
12. Hdac9 ENSMUSG00000004698 287 0.913 0.913 - - - - - histone deacetylase 9 [Source:MGI Symbol;Acc:MGI:1931221]
13. Nlrx1 ENSMUSG00000032109 363 0.913 0.913 - - - - - NLR family member X1 [Source:MGI Symbol;Acc:MGI:2429611]
14. Ebf4 ENSMUSG00000053552 463 0.912 0.912 - - - - - early B cell factor 4 [Source:MGI Symbol;Acc:MGI:2385972]
15. Lmna ENSMUSG00000028063 622 0.912 0.912 - - - - - lamin A [Source:MGI Symbol;Acc:MGI:96794]
16. Yod1 ENSMUSG00000046404 793 0.912 0.912 - - - - - YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
17. Tmem8 ENSMUSG00000024180 228 0.912 0.912 - - - - - transmembrane protein 8 (five membrane-spanning domains) [Source:MGI Symbol;Acc:MGI:1926283]
18. Adam15 ENSMUSG00000028041 630 0.912 0.912 - - - - - a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]
19. Fsd1 ENSMUSG00000011589 902 0.912 0.912 - - - - - fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
20. Lnx2 ENSMUSG00000016520 439 0.912 0.912 - - - - - ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
21. Gm12521 Gm12521 210 0.912 0.912 - - - - -
22. Nit2 ENSMUSG00000022751 895 0.911 0.911 - - - - - nitrilase family, member 2 [Source:MGI Symbol;Acc:MGI:1261838]
23. Dqx1 ENSMUSG00000009145 545 0.911 0.911 - - - - - DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
24. Gm13680 ENSMUSG00000081400 447 0.911 0.911 - - - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
25. Stk3 ENSMUSG00000022329 1332 0.911 0.911 - - - - - serine/threonine kinase 3 [Source:MGI Symbol;Acc:MGI:1928487]
26. 2010003O02Rik 2010003O02Rik 2896 0.911 0.911 - - - - -
27. Rprm ENSMUSG00000075334 1010 0.911 0.911 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate [Source:MGI Symbol;Acc:MGI:1915124]
28. Cwc27 ENSMUSG00000021715 899 0.911 0.911 - - - - - CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
29. Clp1 ENSMUSG00000027079 3327 0.911 0.911 - - - - - CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
30. Ccdc166 ENSMUSG00000098176 524 0.911 0.911 - - - - - coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]
31. Mettl15 ENSMUSG00000057234 379 0.911 0.911 - - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
32. Mbtps2 ENSMUSG00000046873 1811 0.911 0.911 - - - - - membrane-bound transcription factor peptidase, site 2 [Source:MGI Symbol;Acc:MGI:2444506]
33. Ucp2 ENSMUSG00000033685 2664 0.91 0.910 - - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
34. Med8 ENSMUSG00000006392 1655 0.91 0.910 - - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
35. 5830418K08Rik 5830418K08Rik 1814 0.91 0.910 - - - - -
36. Gm10177 ENSMUSG00000090136 864 0.91 0.910 - - - - - predicted gene 10177 [Source:MGI Symbol;Acc:MGI:3704330]
37. Sppl2a ENSMUSG00000027366 1802 0.909 0.909 - - - - - signal peptide peptidase like 2A [Source:MGI Symbol;Acc:MGI:1913802]
38. Fam160b1 ENSMUSG00000033478 2187 0.909 0.909 - - - - - family with sequence similarity 160, member B1 [Source:MGI Symbol;Acc:MGI:2147545]
39. Ly75 ENSMUSG00000026980 766 0.909 0.909 - - - - - lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
40. Lrrc42 ENSMUSG00000028617 1235 0.909 0.909 - - - - - leucine rich repeat containing 42 [Source:MGI Symbol;Acc:MGI:1925059]
41. 2310061I04Rik ENSMUSG00000050705 1463 0.908 0.908 - - - - - RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
42. Zfp574 ENSMUSG00000045252 1410 0.907 0.907 - - - - - zinc finger protein 574 [Source:MGI Symbol;Acc:MGI:2442951]
43. Dpep1 ENSMUSG00000019278 422 0.907 0.907 - - - - - dipeptidase 1 (renal) [Source:MGI Symbol;Acc:MGI:94917]
44. Sh3gl3 ENSMUSG00000030638 2388 0.907 0.907 - - - - - SH3-domain GRB2-like 3 [Source:MGI Symbol;Acc:MGI:700011]
45. Epb4.1l4a Epb4.1l4a 1817 0.907 0.907 - - - - -
46. Pno1 ENSMUSG00000020116 5621 0.907 0.907 - - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
47. Sestd1 ENSMUSG00000042272 2490 0.907 0.907 - - - - - SEC14 and spectrin domains 1 [Source:MGI Symbol;Acc:MGI:1916262]
48. Nek9 ENSMUSG00000034290 2314 0.907 0.907 - - - - - NIMA (never in mitosis gene a)-related expressed kinase 9 [Source:MGI Symbol;Acc:MGI:2387995]
49. Zzef1 ENSMUSG00000055670 953 0.907 0.907 - - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
50. Cenpl ENSMUSG00000026708 1567 0.907 0.907 - - - - - centromere protein L [Source:MGI Symbol;Acc:MGI:1917704]
51. Lrrc1 ENSMUSG00000032352 1281 0.907 0.907 - - - - - leucine rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442313]
52. Nhlrc2 ENSMUSG00000025078 1180 0.907 0.907 - - - - - NHL repeat containing 2 [Source:MGI Symbol;Acc:MGI:1914116]
53. Cnot11 ENSMUSG00000003135 1391 0.906 0.906 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:MGI Symbol;Acc:MGI:106580]
54. Haus8 ENSMUSG00000035439 1485 0.906 0.906 - - - - - 4HAUS augmin-like complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1923728]
55. Cep68 ENSMUSG00000044066 1055 0.906 0.906 - - - - - centrosomal protein 68 [Source:MGI Symbol;Acc:MGI:2667663]
56. H1f0 ENSMUSG00000096210 6629 0.906 0.906 - - - - - H1 histone family, member 0 [Source:MGI Symbol;Acc:MGI:95893]
57. 1110001J03Rik 2404 0.905 0.905 - - - - - RIKEN cDNA 1110001J03 gene
58. Crmp1 ENSMUSG00000029121 3165 0.905 0.905 - - - - - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
59. Ccdc174 ENSMUSG00000034083 1439 0.905 0.905 - - - - - coiled-coil domain containing 174 [Source:MGI Symbol;Acc:MGI:2444652]
60. Bub1 ENSMUSG00000027379 1882 0.904 0.904 - - - - - BUB1, mitotic checkpoint serine/threonine kinase [Source:MGI Symbol;Acc:MGI:1100510]
61. Kansl1 ENSMUSG00000018412 2084 0.904 0.904 - - - - - KAT8 regulatory NSL complex subunit 1 [Source:MGI Symbol;Acc:MGI:1923969]
62. Sgol1 1886 0.903 0.903 - - - - - shugoshin-like 1 (S. pombe), transcript variant X2
63. Ctsl ENSMUSG00000021477 3529 0.903 0.903 - - - - - cathepsin L [Source:MGI Symbol;Acc:MGI:88564]
64. Stau1 ENSMUSG00000039536 3392 0.903 0.903 - - - - - staufen double-stranded RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1338864]
65. Chuk ENSMUSG00000025199 1732 0.902 0.902 - - - - - conserved helix-loop-helix ubiquitous kinase [Source:MGI Symbol;Acc:MGI:99484]
66. Gm6483 ENSMUSG00000087153 1875 0.901 0.901 - - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
67. Ets1 ENSMUSG00000032035 1513 0.901 0.901 - - - - - E26 avian leukemia oncogene 1, 5' domain [Source:MGI Symbol;Acc:MGI:95455]
68. Spast ENSMUSG00000024068 2727 0.9 0.900 - - - - - spastin [Source:MGI Symbol;Acc:MGI:1858896]
69. Txndc17 ENSMUSG00000020803 3761 0.9 0.900 - - - - - thioredoxin domain containing 17 [Source:MGI Symbol;Acc:MGI:1289248]
70. Tgoln1 ENSMUSG00000056429 3152 0.9 0.900 - - - - - trans-golgi network protein [Source:MGI Symbol;Acc:MGI:105080]
71. Gm12940 ENSMUSG00000085334 1603 0.9 0.900 - - - - - predicted gene 12940 [Source:MGI Symbol;Acc:MGI:3702626]
72. Zkscan8 ENSMUSG00000063894 1669 0.899 0.899 - - - - - zinc finger with KRAB and SCAN domains 8 [Source:MGI Symbol;Acc:MGI:1913815]
73. AI846148 3356 0.899 0.899 - - - - - expressed sequence AI846148, transcript variant X2
74. Zkscan1 ENSMUSG00000029729 2845 0.898 0.898 - - - - - zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
75. Cd151 ENSMUSG00000025510 2760 0.898 0.898 - - - - - CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]
76. AW549877 ENSMUSG00000041935 2924 0.898 0.898 - - - - - expressed sequence AW549877 [Source:MGI Symbol;Acc:MGI:2146232]
77. Stag2 ENSMUSG00000025862 3862 0.898 0.898 - - - - - stromal antigen 2 [Source:MGI Symbol;Acc:MGI:1098583]
78. Lin7c ENSMUSG00000027162 3559 0.898 0.898 - - - - - lin-7 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1330839]
79. Rhot1 ENSMUSG00000017686 4099 0.897 0.897 - - - - - ras homolog family member T1 [Source:MGI Symbol;Acc:MGI:1926078]
80. Ppfibp1 ENSMUSG00000016487 1415 0.896 0.896 - - - - - PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:MGI Symbol;Acc:MGI:1914783]
81. Mbnl2 ENSMUSG00000022139 3296 0.896 0.896 - - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
82. Hipk1 ENSMUSG00000008730 2363 0.896 0.896 - - - - - homeodomain interacting protein kinase 1 [Source:MGI Symbol;Acc:MGI:1314873]
83. Cenpm ENSMUSG00000068101 2118 0.896 0.896 - - - - - centromere protein M [Source:MGI Symbol;Acc:MGI:1913820]
84. Kalrn ENSMUSG00000061751 1798 0.895 0.895 - - - - - kalirin, RhoGEF kinase [Source:MGI Symbol;Acc:MGI:2685385]
85. Poldip2 ENSMUSG00000001100 3214 0.894 0.894 - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915061]
86. Hsph1 ENSMUSG00000029657 19023 0.893 0.893 - - - - - heat shock 105kDa/110kDa protein 1 [Source:MGI Symbol;Acc:MGI:105053]
87. Nfyb ENSMUSG00000020248 4562 0.892 0.892 - - - - - nuclear transcription factor-Y beta [Source:MGI Symbol;Acc:MGI:97317]
88. Ccdc23 Ccdc23 2476 0.89 0.890 - - - - -
89. Sos2 ENSMUSG00000034801 3613 0.889 0.889 - - - - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:MGI Symbol;Acc:MGI:98355]
90. Gatad1 ENSMUSG00000007415 3350 0.889 0.889 - - - - - GATA zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1914460]
91. Isoc1 ENSMUSG00000024601 3341 0.889 0.889 - - - - - isochorismatase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913557]
92. Cdca3 ENSMUSG00000023505 4570 0.887 0.887 - - - - - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
93. Rab1b ENSMUSG00000024870 4174 0.887 0.887 - - - - - RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]
94. Bod1l ENSMUSG00000061755 2689 0.886 0.886 - - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
95. Safb2 ENSMUSG00000042625 4475 0.886 0.886 - - - - - scaffold attachment factor B2 [Source:MGI Symbol;Acc:MGI:2146808]
96. Rsl24d1 ENSMUSG00000032215 6534 0.885 0.885 - - - - - ribosomal L24 domain containing 1 [Source:MGI Symbol;Acc:MGI:2681840]
97. Gm16089 ENSMUSG00000081228 1617 0.884 0.884 - - - - - predicted gene 16089 [Source:MGI Symbol;Acc:MGI:3801884]
98. Mrpl28 ENSMUSG00000024181 1602 0.884 0.884 - - - - - mitochondrial ribosomal protein L28 [Source:MGI Symbol;Acc:MGI:1915861]
99. Gm10718 ENSMUSG00000095186 877 0.884 0.884 - - - - - predicted gene 10718 [Source:MGI Symbol;Acc:MGI:3642028]
100. Upf1 ENSMUSG00000058301 1982 0.883 0.883 - - - - - UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]

There are 80 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA