Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Fam188b

Gene Name Gene ID Reads Annotation
Fam188b 233 family with sequence similarity 188, member B, transcript variant X5







Genes with expression patterns similar to Fam188b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Fam188b 233 6 1.000 1.000 1.000 1.000 1.000 1.000 family with sequence similarity 188, member B, transcript variant X5
2. Pcdh10 ENSMUSG00000049100 172 0.919 - - 0.919 - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
3. Zfp551 ENSMUSG00000034071 101 0.905 - - 0.905 - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
4. 1700007K13Rik ENSMUSG00000026831 52 0.899 - - 0.899 - - - RIKEN cDNA 1700007K13 gene [Source:MGI Symbol;Acc:MGI:1916577]
5. Aatk ENSMUSG00000025375 43 0.894 - - 0.894 - - - apoptosis-associated tyrosine kinase [Source:MGI Symbol;Acc:MGI:1197518]
6. Gm6211 ENSMUSG00000091577 43 0.893 - - 0.893 - - - predicted gene 6211 [Source:MGI Symbol;Acc:MGI:3646534]
7. Stxbp3a Stxbp3a 493 0.886 - - 0.886 - - -
8. Nipal1 ENSMUSG00000067219 50 0.883 - - 0.883 - - - NIPA-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1917951]
9. Gm5921 ENSMUSG00000074034 52 0.879 - - 0.879 - - - predicted gene 5921 [Source:MGI Symbol;Acc:MGI:3648968]
10. Gm26704 ENSMUSG00000097875, ENSMUSG00000116724 9 0.879 - - 0.879 - - - predicted gene, 26704 [Source:MGI Symbol;Acc:MGI:5477198]
11. Snx11 ENSMUSG00000020876 41 0.878 - - 0.878 - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
12. Gm11630 ENSMUSG00000086917 9 0.878 - - 0.878 - - - predicted gene 11630 [Source:MGI Symbol;Acc:MGI:3650475]
13. Abcg3 ENSMUSG00000029299 9 0.877 - - 0.877 - - - ATP binding cassette subfamily G member 3 [Source:MGI Symbol;Acc:MGI:1351624]
14. Gm25933 ENSMUSG00000095876 6 0.876 - - 0.876 - - - predicted gene, 25933 [Source:MGI Symbol;Acc:MGI:5455710]
15. Gm22806 ENSMUSG00000064672 11 0.876 - - 0.876 - - - predicted gene, 22806 [Source:MGI Symbol;Acc:MGI:5452583]
16. Gm10715 ENSMUSG00000096201 18 0.876 - - 0.876 - - - predicted gene 10715 [Source:MGI Symbol;Acc:MGI:3642376]
17. Gm25348 ENSMUSG00000089586 11 0.875 - - 0.875 - - - predicted gene, 25348 [Source:MGI Symbol;Acc:MGI:5455125]
18. 5330439K02Rik ENSMUSG00000097827 13 0.872 - - 0.872 - - - RIKEN cDNA 5330439K02 gene [Source:MGI Symbol;Acc:MGI:1925532]
19. Gm13961 ENSMUSG00000084094 26 0.871 - - 0.871 - - - predicted gene 13961 [Source:MGI Symbol;Acc:MGI:3650627]
20. Ccnb2-ps ENSMUSG00000083718 83 0.871 - - 0.871 - - - cyclin B2, pseudogene [Source:MGI Symbol;Acc:MGI:3779896]
21. Znf41-ps ENSMUSG00000084350 36 0.87 - - 0.870 - - - ZNF41, pseudogene [Source:MGI Symbol;Acc:MGI:1917255]
22. Tbx1 ENSMUSG00000009097 77 0.869 - - 0.869 - - - T-box 1 [Source:MGI Symbol;Acc:MGI:98493]
23. Mir1983 ENSMUSG00000088148 63 0.868 - - 0.868 - - - microRNA 1983 [Source:MGI Symbol;Acc:MGI:3837223]
24. Zfp58 ENSMUSG00000071291 34 0.868 - - 0.868 - - - zinc finger protein 58 [Source:MGI Symbol;Acc:MGI:99205]
25. Ccdc11 Ccdc11 17 0.867 - - 0.867 - - -
26. Tlr7 ENSMUSG00000044583 11 0.867 - - 0.867 - - - toll-like receptor 7 [Source:MGI Symbol;Acc:MGI:2176882]
27. Rasgrf2 ENSMUSG00000021708 16 0.866 - - 0.866 - - - RAS protein-specific guanine nucleotide-releasing factor 2 [Source:MGI Symbol;Acc:MGI:109137]
28. Hoxa6 ENSMUSG00000043219 83 0.865 - - 0.865 - - - homeobox A6 [Source:MGI Symbol;Acc:MGI:96178]
29. B130006D01Rik ENSMUSG00000075596 183 0.865 - - 0.865 - - - RIKEN cDNA B130006D01 gene [Source:MGI Symbol;Acc:MGI:2444371]
30. Plcl1 ENSMUSG00000038349 34 0.864 - - 0.864 - - - phospholipase C-like 1 [Source:MGI Symbol;Acc:MGI:3036262]
31. Gm16283 ENSMUSG00000087020 28 0.863 - - 0.863 - - - predicted gene 16283 [Source:MGI Symbol;Acc:MGI:3826591]
32. Arfgap2 ENSMUSG00000027255 8 0.862 - - 0.862 - - - ADP-ribosylation factor GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:1924288]
33. Gm12942 332 0.862 - - 0.862 - - - predicted gene 12942
34. Vps13c ENSMUSG00000035284 230 0.859 - - 0.859 - - - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
35. Kcnd2 ENSMUSG00000060882 118 0.859 - - 0.859 - - - potassium voltage-gated channel, Shal-related family, member 2 [Source:MGI Symbol;Acc:MGI:102663]
36. Gm25291 ENSMUSG00000084744 16 0.858 - - 0.858 - - - predicted gene, 25291 [Source:MGI Symbol;Acc:MGI:5455068]
37. Aim1l 28 0.858 - - 0.858 - - - absent in melanoma 1-like, transcript variant X4
38. Gm26734 ENSMUSG00000097460 45 0.855 - - 0.855 - - - predicted gene, 26734 [Source:MGI Symbol;Acc:MGI:5477228]
39. Fstl4 ENSMUSG00000036264 74 0.853 - - 0.853 - - - follistatin-like 4 [Source:MGI Symbol;Acc:MGI:2443199]
40. Evi2a ENSMUSG00000078771 27 0.851 - - 0.851 - - - ecotropic viral integration site 2a [Source:MGI Symbol;Acc:MGI:95458]
41. Mal ENSMUSG00000027375 39 0.851 - - 0.851 - - - myelin and lymphocyte protein, T cell differentiation protein [Source:MGI Symbol;Acc:MGI:892970]
42. Gm3150 ENSMUSG00000096173 83 0.849 - - 0.849 - - - predicted gene 3150 [Source:MGI Symbol;Acc:MGI:3781329]
43. Gm20696 ENSMUSG00000030068 92 0.846 - - 0.846 - - - predicted gene 20696 [Source:MGI Symbol;Acc:MGI:5313143]
44. Adrm1 ENSMUSG00000039041 219 0.845 - - 0.845 - - - adhesion regulating molecule 1 [Source:MGI Symbol;Acc:MGI:1929289]
45. Ampd3 ENSMUSG00000005686 113 0.845 - - 0.845 - - - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
46. Gjb6 ENSMUSG00000040055 80 0.844 - - 0.844 - - - gap junction protein, beta 6 [Source:MGI Symbol;Acc:MGI:107588]
47. Fam35a 250 0.843 - - 0.843 - - - family with sequence similarity 35, member A, transcript variant X8
48. Taco1 ENSMUSG00000001983 63 0.843 - - 0.843 - - - translational activator of mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:1917457]
49. Gm20716 ENSMUSG00000093752 3044 0.842 - - 0.842 - - - predicted gene 20716 [Source:MGI Symbol;Acc:MGI:5313163]
50. Gm14138 ENSMUSG00000081572 36 0.842 - - 0.842 - - - predicted gene 14138 [Source:MGI Symbol;Acc:MGI:3649496]
51. BB218582 ENSMUSG00000085218 128 0.841 - - 0.841 - - - expressed sequence BB218582 [Source:MGI Symbol;Acc:MGI:2139448]
52. Apobec3 ENSMUSG00000009585 138 0.84 - - 0.840 - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 [Source:MGI Symbol;Acc:MGI:1933111]
53. Pars2 ENSMUSG00000043572 130 0.84 - - 0.840 - - - prolyl-tRNA synthetase (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:2386296]
54. Zfp54 ENSMUSG00000023882 41 0.839 - - 0.839 - - - zinc finger protein 54 [Source:MGI Symbol;Acc:MGI:99201]
55. Pde1a ENSMUSG00000059173 184 0.838 - - 0.838 - - - phosphodiesterase 1A, calmodulin-dependent [Source:MGI Symbol;Acc:MGI:1201792]
56. 2810433D01Rik ENSMUSG00000086283 23 0.836 - - 0.836 - - - RIKEN cDNA 2810433D01 gene [Source:MGI Symbol;Acc:MGI:1924382]
57. Prr16 ENSMUSG00000073565 31 0.836 - - 0.836 - - - proline rich 16 [Source:MGI Symbol;Acc:MGI:1918623]
58. Ptar1 ENSMUSG00000074925 115 0.834 - - 0.834 - - - protein prenyltransferase alpha subunit repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921875]
59. Hid1 ENSMUSG00000034586 131 0.833 - - 0.833 - - - HID1 domain containing [Source:MGI Symbol;Acc:MGI:2445087]
60. 4930426D05Rik ENSMUSG00000043168 40 0.832 - - 0.832 - - - RIKEN cDNA 4930426D05 gene [Source:MGI Symbol;Acc:MGI:1921894]
61. Lhfpl1 ENSMUSG00000041700 92 0.83 - - 0.830 - - - lipoma HMGIC fusion partner-like 1 [Source:MGI Symbol;Acc:MGI:1891214]
62. 2700081L22Rik 2700081L22Rik 44 0.829 - - 0.829 - - -
63. Tle6 ENSMUSG00000034758 116 0.827 - - 0.827 - - - transducin-like enhancer of split 6 [Source:MGI Symbol;Acc:MGI:2149593]
64. Clcnka ENSMUSG00000033770 16 0.823 - - 0.823 - - - chloride channel, voltage-sensitive Ka [Source:MGI Symbol;Acc:MGI:1329026]
65. Oprm1 ENSMUSG00000000766 292 0.819 - - 0.819 - - - opioid receptor, mu 1 [Source:MGI Symbol;Acc:MGI:97441]
66. 1700029J07Rik ENSMUSG00000071103 140 0.818 - - 0.818 - - - RIKEN cDNA 1700029J07 gene [Source:MGI Symbol;Acc:MGI:1916729]
67. Wdr54 ENSMUSG00000030032 113 0.816 - - 0.816 - - - WD repeat domain 54 [Source:MGI Symbol;Acc:MGI:1922909]
68. Gm4462 ENSMUSG00000090319 36 0.816 - - 0.816 - - - predicted gene 4462 [Source:MGI Symbol;Acc:MGI:3782646]
69. Fau ENSMUSG00000038274 25 0.813 - - 0.813 - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547]
70. Clock ENSMUSG00000029238 219 0.813 - - 0.813 - - - circadian locomotor output cycles kaput [Source:MGI Symbol;Acc:MGI:99698]
71. 1110032F04Rik ENSMUSG00000046999 184 0.811 - - 0.811 - - - RIKEN cDNA 1110032F04 gene [Source:MGI Symbol;Acc:MGI:1915975]
72. Gm5914 ENSMUSG00000098120 75 0.81 - - 0.810 - - - predicted gene 5914 [Source:MGI Symbol;Acc:MGI:3779534]
73. Rapgef5 ENSMUSG00000041992 56 0.808 - - 0.808 - - - Rap guanine nucleotide exchange factor (GEF) 5 [Source:MGI Symbol;Acc:MGI:2444365]
74. Crym ENSMUSG00000030905 71 0.807 - - 0.807 - - - crystallin, mu [Source:MGI Symbol;Acc:MGI:102675]
75. Fbxo46 ENSMUSG00000050428 225 0.807 - - 0.807 - - - F-box protein 46 [Source:MGI Symbol;Acc:MGI:2444918]
76. Snhg6 ENSMUSG00000098234 549 0.806 - - 0.806 - - - small nucleolar RNA host gene 6 [Source:MGI Symbol;Acc:MGI:1921074]
77. Gm5121 ENSMUSG00000066626 235 0.799 - - 0.799 - - - predicted gene 5121 [Source:MGI Symbol;Acc:MGI:3647258]
78. Vwa5a ENSMUSG00000023186 304 0.798 - - 0.798 - - - von Willebrand factor A domain containing 5A [Source:MGI Symbol;Acc:MGI:1915026]
79. Snora68 ENSMUSG00000077563 99 0.794 - - 0.794 - - - small nucleolar RNA, H/ACA box 68 [Source:MGI Symbol;Acc:MGI:2148181]
80. Gm13139 312 0.794 - - 0.794 - - - predicted gene 13139
81. RP24-289J12.1 RP24-289J12.1 254 0.794 - - 0.794 - - -
82. 1700030K09Rik ENSMUSG00000052794 252 0.794 - - 0.794 - - - RIKEN cDNA 1700030K09 gene [Source:MGI Symbol;Acc:MGI:1919504]
83. Cyp2j6 ENSMUSG00000052914 325 0.792 - - 0.792 - - - cytochrome P450, family 2, subfamily j, polypeptide 6 [Source:MGI Symbol;Acc:MGI:1270148]
84. A730017L22Rik ENSMUSG00000085566 146 0.792 - - 0.792 - - - RIKEN cDNA A730017L22 gene [Source:MGI Symbol;Acc:MGI:3584452]
85. 2210015D19Rik 2210015D19Rik 1089 0.792 - - 0.792 - - -
86. Rnf135 ENSMUSG00000020707 98 0.791 - - 0.791 - - - ring finger protein 135 [Source:MGI Symbol;Acc:MGI:1919206]
87. Ctf2 ENSMUSG00000060034 240 0.786 - - 0.786 - - - cardiotrophin 2 [Source:MGI Symbol;Acc:MGI:2684607]
88. 2310002L09Rik ENSMUSG00000028396 135 0.786 - - 0.786 - - - RIKEN cDNA 2310002L09 gene [Source:MGI Symbol;Acc:MGI:1916780]
89. Gpt ENSMUSG00000022546 145 0.785 - - 0.785 - - - glutamic pyruvic transaminase, soluble [Source:MGI Symbol;Acc:MGI:95802]
90. Pex12 ENSMUSG00000018733 304 0.783 - - 0.783 - - - peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
91. Naif1 ENSMUSG00000039164 151 0.783 - - 0.783 - - - nuclear apoptosis inducing factor 1 [Source:MGI Symbol;Acc:MGI:1918504]
92. Gin1 ENSMUSG00000026333 428 0.782 - - 0.782 - - - gypsy retrotransposon integrase 1 [Source:MGI Symbol;Acc:MGI:2182036]
93. Fgf8 ENSMUSG00000025219 27 0.78 - - 0.780 - - - fibroblast growth factor 8 [Source:MGI Symbol;Acc:MGI:99604]
94. Faxc ENSMUSG00000028246 115 0.779 - - 0.779 - - - failed axon connections homolog [Source:MGI Symbol;Acc:MGI:1923382]
95. Zfc3h1 ENSMUSG00000034163 1104 0.778 - - 0.778 - - - zinc finger, C3H1-type containing [Source:MGI Symbol;Acc:MGI:2446143]
96. Gm5258 ENSMUSG00000091806 123 0.778 - - 0.778 - - - predicted gene 5258 [Source:MGI Symbol;Acc:MGI:3647794]
97. Slco3a1 ENSMUSG00000025790 755 0.775 - - 0.775 - - - solute carrier organic anion transporter family, member 3a1 [Source:MGI Symbol;Acc:MGI:1351867]
98. Tesk2 ENSMUSG00000033985 210 0.774 - - 0.774 - - - testis-specific kinase 2 [Source:MGI Symbol;Acc:MGI:2385204]
99. Dnase2a ENSMUSG00000003812 117 0.772 - - 0.772 - - - deoxyribonuclease II alpha [Source:MGI Symbol;Acc:MGI:1329019]
100. Ndrg3 ENSMUSG00000027634 1152 0.771 - - 0.771 - - - N-myc downstream regulated gene 3 [Source:MGI Symbol;Acc:MGI:1352499]

There are 46 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA