Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FXR1

Gene Name Gene ID Reads Annotation
FXR1 ENSGALG00000008864 10250 FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]











Genes with expression patterns similar to FXR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FXR1 ENSGALG00000008864 10250 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
2. CHMP6 ENSGALG00000026428 18026 1.735 - - - - - - 0.805 0.930 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
3. NDUFB3 ENSGALG00000008239 15511 1.73 - - - - - - 0.780 0.950 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
4. PGAM5 ENSGALG00000002137 7700 1.714 - - - - - - 0.805 0.909 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
5. MRPL20 ENSGALG00000001542 28764 1.662 - - - - - - 0.781 0.881 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
6. RUVBL1 ENSGALG00000005931 9379 1.636 - - - - - - 0.783 0.853 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
7. PPCS ENSGALG00000004882 5759 1.631 - - - - - - 0.742 0.889 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
8. PAN3 ENSGALG00000017092 5387 1.621 - - - - - - 0.775 0.846 - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
9. SNAI2 ENSGALG00000030902 8201 1.619 - - - - - - 0.710 0.909 - - snail family transcriptional repressor 2
10. SLC35E3 ENSGALG00000009940 8560 1.615 - - - - - - 0.755 0.860 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
11. CENPH ENSGALG00000014788 10601 1.611 - - - - - - 0.705 0.906 - - centromere protein H [Source:NCBI gene;Acc:395316]
12. ERGIC2 ENSGALG00000007183 12870 1.609 - - - - - - 0.718 0.891 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
13. DLD ENSGALG00000007931 11011 1.602 - - - - - - 0.764 0.838 - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
14. LIMD1 ENSGALG00000035623 7282 1.599 - - - - - - 0.781 0.818 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
15. CNOT8 ENSGALG00000003950 8271 1.594 - - - - - - 0.740 0.854 - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
16. ATG4C ENSGALG00000010985 6102 1.592 - - - - - - 0.704 0.888 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
17. SPG21 ENSGALG00000007262 8050 1.559 - - - - - - 0.716 0.843 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
18. PFDN1 ENSGALG00000000946 18822 1.558 - - - - - - 0.706 0.852 - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
19. SART3 ENSGALG00000039472 4948 1.457 - - - - - - 0.736 0.721 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
20. NFYB ENSGALG00000041193 6158 1.426 - - 0.708 - - - 0.718 - - - nuclear transcription factor Y subunit beta [Source:NCBI gene;Acc:396205]
21. CKAP2 ENSGALG00000017025 25020 0.945 - - - - - - - 0.945 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
22. MRPL18 ENSGALG00000011625 7855 0.94 - - - - - - - 0.940 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
23. CHMP3 ENSGALG00000015805 11581 0.935 - - - - - - - 0.935 - - charged multivesicular body protein 3
24. MAPK9 ENSGALG00000039099 5467 0.933 - - - - - - - 0.933 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
25. BID ENSGALG00000013039 12427 0.933 - - - - - - - 0.933 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
26. ZNF326 ENSGALG00000006113 15141 0.93 - - - - - - - 0.930 - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
27. UBE2D1 ENSGALG00000021213 5876 0.93 - - - - - - - 0.930 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
28. MRPS23 ENSGALG00000005559 10360 0.925 - - - - - - - 0.925 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
29. ENSGALG00000003150 ENSGALG00000003150 10001 0.925 - - - - - - - 0.925 - -
30. TSC22D2 ENSGALG00000027591 6594 0.921 - - - - - - - 0.921 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
31. AHCTF1 ENSGALG00000010630 4809 0.921 - - - - - - - 0.921 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
32. TXNDC5 ENSGALG00000012784 4678 0.919 - - - - - - - 0.919 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
33. NAE1 ENSGALG00000038957 13777 0.919 - - - - - - - 0.919 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
34. FGFR1OP ENSGALG00000011423 2418 0.916 - - - - - - - 0.916 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
35. LATS2 4776 0.914 - - - - - - - 0.914 - - large tumor suppressor kinase 2
36. SNAP29 ENSGALG00000040128 3581 0.914 - - - - - - - 0.914 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
37. KDM4A ENSGALG00000010074 7219 0.912 - - - - - - - 0.912 - - lysine demethylase 4A
38. NET1 ENSGALG00000008437 9850 0.91 - - - - - - - 0.910 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
39. NDUFAF1 ENSGALG00000008587 14779 0.91 - - - - - - - 0.910 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
40. RDM1 ENSGALG00000000243 3388 0.909 - - - - - - - 0.909 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
41. EFTUD2 ENSGALG00000000988 17913 0.909 - - - - - - - 0.909 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
42. CEP170 ENSGALG00000010733 4177 0.908 - - - - - - - 0.908 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
43. MED24 ENSGALG00000013506 5403 0.908 - - - - - - - 0.908 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
44. ECHS1 ENSGALG00000024271 9364 0.908 - - - - - - - 0.908 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
45. GTF2A2 ENSGALG00000003793 5957 0.906 - - - - - - - 0.906 - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
46. RNF214 ENSGALG00000036993 3729 0.904 - - - - - - - 0.904 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
47. CAMSAP2 ENSGALG00000002145 6109 0.9 - - - - - - - 0.900 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
48. LIG3 ENSGALG00000002288 7198 0.9 - - - - - - - 0.900 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
49. VGLL4 ENSGALG00000004937 3762 0.899 - - - - - - - 0.899 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
50. MAST2 ENSGALG00000010313 2975 0.898 - - - - - - - 0.898 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
51. PEO1 PEO1 6747 0.897 - - - - - - - 0.897 - -
52. FBXO33 ENSGALG00000010192 2917 0.897 - - - - - - - 0.897 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
53. NDUFS6 ENSGALG00000013191 15874 0.897 - - - - - - - 0.897 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
54. HPCAL1 ENSGALG00000016443 6633 0.897 - - - - - - - 0.897 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
55. VCAN ENSGALG00000015624 11489 0.895 - - - - - - - 0.895 - - versican [Source:NCBI gene;Acc:395565]
56. SRP72 ENSGALG00000011403 13666 0.895 - - - - - - - 0.895 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
57. ARFRP1 ENSGALG00000006101 3743 0.894 - - - - - - - 0.894 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
58. BAG3 ENSGALG00000009433 6152 0.893 - - - - - - - 0.893 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
59. SMDT1 ENSGALG00000011897 9360 0.892 - - - - - - - 0.892 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
60. CDC42BPA ENSGALG00000009158 3926 0.892 - - - - - - - 0.892 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
61. MTERFD1 MTERFD1 3640 0.891 - - - - - - - 0.891 - -
62. NCAM1 ENSGALG00000007839 19929 0.89 - - - - - - - 0.890 - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
63. BRCC3 ENSGALG00000005383 4844 0.89 - - - - - - - 0.890 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
64. ARHGEF4 ENSGALG00000002193 558 0.889 - - - - - - - 0.889 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
65. SCO1 ENSGALG00000030475 7304 0.889 - - - - - - - 0.889 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
66. TCEA1 ENSGALG00000015274 2706 0.889 - - - - - - - 0.889 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
67. TUBAL3 ENSGALG00000008444 2979 0.888 - - - - - - - 0.888 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
68. CTSC ENSGALG00000017239 7651 0.888 - - - - - - - 0.888 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
69. TMEM59 ENSGALG00000010746 4669 0.887 - - - - - - - 0.887 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
70. SMIM12 ENSGALG00000030261 5860 0.887 - - - - - - - 0.887 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
71. PIGK ENSGALG00000009015 7942 0.885 - - - - - - - 0.885 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
72. Mar-05 Mar-05 6330 0.885 - - - - - - - 0.885 - -
73. KHDRBS1 ENSGALG00000003272 4249 0.885 - - - - - - - 0.885 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
74. DPYD ENSGALG00000005509 4115 0.884 - - - - - - - 0.884 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
75. ACSL1 ENSGALG00000010628 2560 0.884 - - - - - - - 0.884 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
76. EDEM1 ENSGALG00000008320 3117 0.884 - - - - - - - 0.884 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
77. ZC3H3 ENSGALG00000043265 1638 0.883 - - - - - - - 0.883 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
78. XPO6 ENSGALG00000035360 7042 0.883 - - - - - - - 0.883 - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
79. CCDC61 ENSGALG00000006714 8066 0.881 - - - - - - - 0.881 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
80. GLG1 ENSGALG00000039818 6221 0.881 - - - - - - - 0.881 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
81. PYCR1 ENSGALG00000007300 7987 0.88 - - - - - - - 0.880 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
82. SLC25A1 ENSGALG00000041760 4744 0.879 - - - - - - - 0.879 - - solute carrier family 25 member 1, transcript variant X2
83. GOLGB1 ENSGALG00000041494 2376 0.878 - - - - - - - 0.878 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
84. TRIM24 ENSGALG00000012823 2725 0.878 - - - - - - - 0.878 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
85. DUSP14 ENSGALG00000027641 3662 0.878 - - - - - - - 0.878 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
86. UCK2 ENSGALG00000003510 2512 0.877 - - - - - - - 0.877 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
87. CARS2 ENSGALG00000016847 3814 0.876 - - - - - - - 0.876 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
88. SMC6 ENSGALG00000016467 3321 0.876 - - - - - - - 0.876 - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
89. NIFK ENSGALG00000011650 14990 0.875 - - - - - - - 0.875 - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
90. gga-mir-1772 ENSGALG00000025300 2892 0.874 - - - - - - - 0.874 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
91. ETF1 ENSGALG00000002262 14560 0.874 - - - - - - - 0.874 - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
92. BCLAF1 ENSGALG00000013935 7596 0.873 - - - - - - - 0.873 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
93. NR2F2 ENSGALG00000007000 4911 0.873 - - - - - - - 0.873 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
94. STX18 ENSGALG00000015012 1489 0.873 - - - - - - - 0.873 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
95. UBAC2 ENSGALG00000016880 1343 0.872 - - - - - - - 0.872 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
96. KLHDC4 ENSGALG00000037315 9828 0.872 - - - - - - 0.872 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
97. CCNH ENSGALG00000015641 8051 0.871 - - - - - - 0.871 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
98. REV3L ENSGALG00000015033 1917 0.871 - - - - - - - 0.871 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
99. TPP2 ENSGALG00000016865 7509 0.869 - - - - - - - 0.869 - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
100. DNAJA1 ENSGALG00000023066 3820 0.869 - - - - - - - 0.869 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]

There are 611 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA