Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FXR

Gene Name Gene ID Reads Annotation
FXR FXR 52











Genes with expression patterns similar to FXR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FXR FXR 52 6 - - - 1.000 1.000 1.000 1.000 1.000 - 1.000
2. AHR2 ENSGALG00000023742 21 1.639 - - - - - - - 0.724 - 0.915 Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
3. BFIV21 BFIV21 30 1.483 - - - - 0.705 - - - - 0.778
4. C2 ENSGALG00000035721 5 1 - - - 1.000 - - - - - - complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
5. GDNF ENSGALG00000003716 7 1 - - - 1.000 - - - - - - glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]
6. UMODL1 ENSGALG00000016157 1 1 - - - 1.000 - - - - - - uromodulin like 1 [Source:HGNC Symbol;Acc:HGNC:12560]
7. FLI1 ENSGALG00000001161 2 1 - - - 1.000 - - - - - - Fli-1 proto-oncogene, ETS transcription factor [Source:NCBI gene;Acc:419723]
8. TSHB ENSGALG00000002550 0 1 - - - 1.000 - - - - - - thyroid stimulating hormone beta [Source:NCBI gene;Acc:395937]
9. ZMAT3 ENSGALG00000040948 4 1 - - - 1.000 - - - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
10. VMO1 ENSGALG00000017172 1 1 - - - 1.000 - - - - - - vitelline membrane outer layer 1 homolog [Source:NCBI gene;Acc:418974]
11. TMEM52B ENSGALG00000034698 169 1 - - - 1.000 - - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
12. CDHR5 CDHR5 1 1 - - - 1.000 - - - - - -
13. LRRC72 9 1 - - - 1.000 - - - - - - leucine rich repeat containing 72, transcript variant X4
14. P2RY1 ENSGALG00000010357 11 1 - - - 1.000 - - - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
15. KLHL23 ENSGALG00000020737 13 1 - - - 1.000 - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
16. PRUNE2 ENSGALG00000015167 37 1 - - - 1.000 - - - - - - prune homolog 2, transcript variant X5
17. GRID2 ENSGALG00000010397 6 1 - - - 1.000 - - - - - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
18. PLD4 ENSGALG00000011646 0 1 - - - 1.000 - - - - - - phospholipase D family member 4 [Source:HGNC Symbol;Acc:HGNC:23792]
19. ENSGALG00000023927 ENSGALG00000023927 0 1 - - - 1.000 - - - - - -
20. HTR5A ENSGALG00000006362 1 1 - - - 1.000 - - - - - - 5-hydroxytryptamine receptor 5A [Source:HGNC Symbol;Acc:HGNC:5300]
21. THBD ENSGALG00000044442 6 1 - - - 1.000 - - - - - - thrombomodulin
22. LDB1 ENSGALG00000007641 2 1 - - - 1.000 - - - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
23. MADCAM1 ENSGALG00000028341 6 1 - - - 1.000 - - - - - - mucosal vascular addressin cell adhesion molecule 1
24. ENSGALG00000026782 ENSGALG00000026782 0 1 - - - 1.000 - - - - - -
25. COQ2 ENSGALG00000041294 25 1 - - - 1.000 - - - - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
26. ENSGALG00000027162 ENSGALG00000027162 8 1 - - - 1.000 - - - - - -
27. CNKSR3 ENSGALG00000027159 41 1 - - - 1.000 - - - - - - CNKSR family member 3, transcript variant X2
28. VWA3A 6 1 - - - 1.000 - - - - - - von Willebrand factor A domain containing 3A, transcript variant X4
29. VWC2L ENSGALG00000003472 13 1 - - - 1.000 - - - - - - von Willebrand factor C domain containing protein 2 like [Source:HGNC Symbol;Acc:HGNC:37203]
30. VTG2 ENSGALG00000001863 1 1 - - - 1.000 - - - - - - vitellogenin 2 [Source:NCBI gene;Acc:424533]
31. VLDL VLDL 13 1 - - - 1.000 - - - - - -
32. CCDC60 ENSGALG00000046262 0 1 - - - 1.000 - - - - - - coiled-coil domain containing 60 [Source:HGNC Symbol;Acc:HGNC:28610]
33. ENSGALG00000027201 ENSGALG00000027201 12 1 - - - - - - - - - 1.000
34. LICOS LICOS 13 1 - - - 1.000 - - - - - -
35. INHBB ENSGALG00000028770 2 1 - - - 1.000 - - - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
36. TEKT1 ENSGALG00000006064 18 1 - - - 1.000 - - - - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
37. PGBD5 ENSGALG00000011111 1 1 - - - 1.000 - - - - - - piggyBac transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:19405]
38. USH1G ENSGALG00000038769 4 1 - - - 1.000 - - - - - - USH1 protein network component sans [Source:HGNC Symbol;Acc:HGNC:16356]
39. ADMP ENSGALG00000037408 24 1 - - - 1.000 - - - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
40. SIL1 ENSGALG00000002457 147 0.946 - - - - - - 0.946 - - - SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
41. LY96 ENSGALG00000032701 18 0.915 - - - - - - - - - 0.915 lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
42. VSTM2A ENSGALG00000041764 2 0.915 - - - - - - - - - 0.915 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
43. IL8 ENSGALG00000026098 16 0.915 - - - - - - - - - 0.915 interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
44. ENSGALG00000026135 ENSGALG00000026135 16 0.915 - - - - - - - - - 0.915
45. ENSGALG00000014502 ENSGALG00000014502 2 0.915 - - - - - - - - - 0.915
46. HAAO ENSGALG00000009926 6 0.915 - - - - - - - - - 0.915 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
47. NMU ENSGALG00000020151 29 0.915 - - - - - - - - - 0.915 neuromedin U [Source:NCBI gene;Acc:422748]
48. SLC4A5 ENSGALG00000032146 3 0.915 - - - - - - - - - 0.915 solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
49. GTSF1 ENSGALG00000001109 15 0.915 - - - - - - - - - 0.915 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
50. RHOC ENSGALG00000001569 53 0.915 - - - - - - - - - 0.915 ras homolog family member C [Source:NCBI gene;Acc:395869]
51. KLHL35 ENSGALG00000017332 1 0.915 - - - - - - - - - 0.915 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
52. ENSGALG00000008598 ENSGALG00000008598 2 0.915 - - - - - - - - - 0.915
53. SLC2A1 ENSGALG00000004889 10 0.915 - - - - - - - - - 0.915 solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
54. CCDC178 6 0.915 - - - - - - - - - 0.915 coiled-coil domain containing 178, transcript variant X3
55. TLR7 ENSGALG00000016590 6 0.915 - - - - - - - - - 0.915 toll like receptor 7 [Source:NCBI gene;Acc:418638]
56. GPR83 ENSGALG00000017212 6 0.915 - - - - - - - - - 0.915 G protein-coupled receptor 83 [Source:NCBI gene;Acc:428093]
57. CD38 ENSGALG00000014508 3 0.915 - - - - - - - - - 0.915 CD38 molecule [Source:NCBI gene;Acc:422827]
58. ENSGALG00000026169 ENSGALG00000026169 30 0.915 - - - - - - - - - 0.915
59. ENSGALG00000019640 ENSGALG00000019640 2 0.915 - - - - - - - - - 0.915
60. ANKS3 ENSGALG00000000643 2 0.915 - - - - - - - - - 0.915 ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
61. FAM83B ENSGALG00000016299 17 0.912 - - - - - - - - - 0.912 family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
62. MMP23B ENSGALG00000001392 53 0.903 - - - - - - - - - 0.903 matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
63. SEMA4D ENSGALG00000010697 10 0.9 - - - - - - - - - 0.900 semaphorin 4D [Source:NCBI gene;Acc:396331]
64. ETNK1 ENSGALG00000013205 18 0.9 - - - - - - - - - 0.900 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
65. TTC9 ENSGALG00000017652 16 0.881 - - - - - - 0.881 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
66. PLXNB1 23 0.881 - - - - - - 0.881 - - - plexin B1, transcript variant X2
67. CYP2J19 ENSGALG00000011413 22 0.881 - - - - - - 0.881 - - - cytochrome P450, family 2, subfamily J, polypeptide 19
68. SNX18 ENSGALG00000014914 7 0.881 - - - - - - 0.881 - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
69. WFIKKN2 ENSGALG00000007367 9 0.881 - - - - - - 0.881 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]
70. HPGDS ENSGALG00000010402 343 0.881 - - - - - - 0.881 - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
71. CHADL ENSGALG00000011970 42 0.881 - - - - - - 0.881 - - - chondroadherin-like [Source:NCBI gene;Acc:417998]
72. ENSGALG00000000865 ENSGALG00000000865 46 0.881 - - - - - - 0.881 - - -
73. NKX2-5 ENSGALG00000002886 81 0.881 - - - - - - 0.881 - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
74. ZNF362 ENSGALG00000026558 11 0.881 - - - - - - 0.881 - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
75. DRD2 ENSGALG00000007794 399 0.881 - - - - - - 0.881 - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
76. CALB1 ENSGALG00000032282 16 0.866 - - - - - - 0.866 - - - calbindin 1 [Source:NCBI gene;Acc:396519]
77. ZBTB33 ENSGALG00000008611 15 0.846 - - - - - - - - - 0.846 zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
78. UCP3 ENSGALG00000017316 30 0.843 - - - - - - - - - 0.843 uncoupling protein 3 [Source:NCBI gene;Acc:373896]
79. CHOBF-1 CHOBF-1 41 0.841 - - - - - - 0.841 - - -
80. SMC1B ENSGALG00000014228 19 0.837 - - - - - - - - - 0.837 structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
81. SPP2 ENSGALG00000004129 34 0.835 - - - - - - - - - 0.835 secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
82. VWA1 ENSGALG00000001527 79 0.833 - - - - - - 0.833 - - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
83. GIPC3 ENSGALG00000028029 2 0.831 - - - - - - - - - 0.831 GIPC PDZ domain containing family member 3 [Source:HGNC Symbol;Acc:HGNC:18183]
84. LHX1 ENSGALG00000005409 1 0.831 - - - - - - - - - 0.831 LIM homeobox 1 [Source:NCBI gene;Acc:396381]
85. ENSGALG00000025736 ENSGALG00000025736 3 0.831 - - - - - - - - - 0.831
86. SNORD79 SNORD79 12 0.827 - - - - - - - - - 0.827
87. DLEC1 ENSGALG00000005826 23 0.827 - - - 0.827 - - - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
88. KIAA1841 ENSGALG00000007825 22 0.824 - - - - - - - - - 0.824 KIAA1841 [Source:NCBI gene;Acc:421196]
89. APTX ENSGALG00000001954 692 0.824 - - - - - - 0.824 - - - aprataxin [Source:NCBI gene;Acc:395173]
90. YES1 ENSGALG00000014860 31 0.82 - - - - - - 0.820 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
91. DMRT1 ENSGALG00000010160 425 0.816 - - - - - - - - - 0.816 doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
92. SIM1 ENSGALG00000015466 111 0.814 - - - - - - 0.814 - - - SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
93. OSBPL3 ENSGALG00000011007 23 0.813 - - - - - - 0.813 - - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
94. ENSGALG00000027602 ENSGALG00000027602 20 0.811 - - - - - - - - - 0.811
95. RNF17 ENSGALG00000045414 2 0.811 - - - - - - - - - 0.811 ring finger protein 17, transcript variant X2
96. PHOSPHO1 ENSGALG00000033683 22 0.807 - - - - - - - - - 0.807 phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
97. KIAA0319L ENSGALG00000002445 75 0.805 - - - - - - 0.805 - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
98. SCN5A ENSGALG00000006112 137 0.804 - - - - - - 0.804 - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
99. C9orf96 C9orf96 43 0.799 - - - - - 0.799 - - - -
100. ENSGALG00000028962 ENSGALG00000028962 7 0.797 - - - - - - - - - 0.797

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA