Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for FRMD3

Gene Name Gene ID Reads Annotation
FRMD3 ENSGALG00000012577 999 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]











Genes with expression patterns similar to FRMD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FRMD3 ENSGALG00000012577 999 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
2. TMEM128 ENSGALG00000014992 6567 1.873 - - 0.893 - - - - - - 0.980 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
3. CCT8 ENSGALG00000015821 12161 1.865 - - 0.886 - - - - - - 0.979 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
4. TXNDC12 ENSGALG00000010569 13822 1.78 - - 0.922 - - - - - - 0.858 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
5. RBM5 30998 1.757 - - 0.806 - - - - - - 0.951 RNA binding motif protein 5, transcript variant X1
6. NLGN1 ENSGALG00000040938 651 1.757 - - 0.891 - - - - - - 0.866 neuroligin 1 [Source:NCBI gene;Acc:424980]
7. B3GALTL B3GALTL 4128 1.742 - - 0.787 - - - - - - 0.955
8. ZNF395 ENSGALG00000034140 1868 1.733 - - 0.839 - - - - - - 0.894 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
9. RHOT1 ENSGALG00000003397 5149 1.733 - - 0.769 - - - - - - 0.964 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
10. ARL13B ENSGALG00000015412 2968 1.72 - - 0.788 - - - - - - 0.932 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
11. TBPL1 ENSGALG00000013981 3710 1.69 - - 0.815 - - - - - - 0.875 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
12. ALDH7A1 ENSGALG00000008229 5891 1.689 - - 0.804 - - - - - - 0.885 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
13. SYNCRIP ENSGALG00000015830 30555 1.686 - - 0.867 - - - - - - 0.819 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
14. KIAA1551 ENSGALG00000045168 3435 1.678 - - 0.745 - - - - - - 0.933 KIAA1551, transcript variant X1
15. ERI1 ENSGALG00000011448 3236 1.677 - - 0.846 - - - - - - 0.831 exoribonuclease 1 [Source:NCBI gene;Acc:422629]
16. WDR53 ENSGALG00000006395 4938 1.656 - - 0.736 - - - - - - 0.920 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
17. CABLES1 ENSGALG00000014998 1636 1.63 - - - - - 0.704 - - - 0.926 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
18. CTSO ENSGALG00000009373 4186 1.618 - - 0.741 - - - - - - 0.877 cathepsin O [Source:NCBI gene;Acc:422410]
19. SEC14L1 ENSGALG00000001684 2776 1.616 - - 0.721 - - - - - - 0.895 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
20. RPL22 ENSGALG00000000719 74238 1.579 - - 0.761 - - - - - - 0.818 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
21. ANKRD11 ENSGALG00000006222 12327 1.56 - - 0.713 - - - - - - 0.847 ankyrin repeat domain 11, transcript variant X2
22. SYNE2 ENSGALG00000011811 5542 1.559 - - 0.827 - - - - - - 0.732 spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
23. JMJD6 ENSGALG00000001802 5169 1.547 - - 0.845 - - - - - - 0.702 jumonji domain containing 6 [Source:NCBI gene;Acc:417355]
24. ROMO1 ENSGALG00000027416 9560 1.535 - - 0.752 - - - - - - 0.783 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
25. RPS24 ENSGALG00000004871 173117 1.499 - - 0.747 - - - - - - 0.752 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
26. VAMP4 ENSGALG00000031381 4289 1.494 - - 0.728 - - 0.766 - - - - vesicle associated membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:12645]
27. FUBP1 ENSGALG00000008939 2850 1.481 - - 0.714 - - - - - - 0.767 far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
28. PACSIN3 ENSGALG00000008231 5423 1.456 - - 0.713 - - - - - - 0.743 protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
29. IL10R2 IL10R2 72 0.991 - - - - - - - - - 0.991
30. FAM190B FAM190B 165 0.991 - - - - - - - - - 0.991
31. 5S_2 5S_2 58 0.99 - - - - - - - - - 0.990
32. AURKA ENSGALG00000007768 793 0.99 - - - - - - - - - 0.990 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
33. ITSN2 ENSGALG00000016504 651 0.99 - - - - - - - - - 0.990 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
34. CPNE2 ENSGALG00000001316 236 0.99 - - - - - - - - - 0.990 copine 2 [Source:NCBI gene;Acc:415646]
35. CNTRL ENSGALG00000001513 1773 0.99 - - - - - - - - - 0.990 centriolin [Source:NCBI gene;Acc:417121]
36. ZNF6 ZNF6 138 0.99 - - - - - - - - - 0.990
37. PM20D2 ENSGALG00000015779 1301 0.99 - - - - - - - - - 0.990 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
38. CXADR ENSGALG00000015701 96 0.989 - - - - - - - - - 0.989 coxsackie virus and adenovirus receptor, transcript variant X2
39. SOX6 ENSGALG00000006074 102 0.989 - - - - - - - - - 0.989 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
40. ARHGAP21 ENSGALG00000007721 3961 0.989 - - - - - - - - - 0.989 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
41. CRYM ENSGALG00000002484 3558 0.989 - - - - - - - - - 0.989 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
42. HAUS8 ENSGALG00000003727 351 0.989 - - - - - - - - - 0.989 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
43. APBA3 ENSGALG00000000740 1249 0.988 - - - - - - - - - 0.988 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
44. MSI1 ENSGALG00000007227 2279 0.988 - - - - - - - - - 0.988 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
45. INTS10 ENSGALG00000010130 6320 0.988 - - - - - - - - - 0.988 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
46. ITGA9 ENSGALG00000029378 415 0.988 - - - - - - - - - 0.988 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
47. BRD1 ENSGALG00000029379 6047 0.988 - - - - - - - - - 0.988 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
48. CDH1-A CDH1-A 343 0.987 - - - - - - - - - 0.987
49. WHSC1 1712 0.987 - - - - - - - - - 0.987 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
50. CASKIN1 604 0.987 - - - - - - - - - 0.987 CASK interacting protein 1, transcript variant X4
51. SSH1 ENSGALG00000004928 222 0.987 - - - - - - - - - 0.987 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
52. WDSUB1 ENSGALG00000012574 2038 0.987 - - - - - - - - - 0.987 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
53. FSTL4 ENSGALG00000031487 529 0.987 - - - - - - - - - 0.987 follistatin like 4 [Source:NCBI gene;Acc:395163]
54. PCLO 249 0.986 - - - - - - - - - 0.986 piccolo presynaptic cytomatrix protein
55. C10orf118 C10orf118 762 0.986 - - - - - - - - - 0.986
56. TP53BP1 ENSGALG00000042201 708 0.985 - - - - - - - - - 0.985 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
57. MPRIP ENSGALG00000004798 6700 0.984 - - - - - - - - - 0.984 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
58. FAM129A ENSGALG00000004812 269 0.984 - - - - - - - - - 0.984 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
59. SLC39A13 ENSGALG00000008122 2003 0.984 - - - - - - - - - 0.984 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
60. PREX2 ENSGALG00000042354 134 0.983 - - - - - - - - - 0.983 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
61. PTX3 ENSGALG00000028284 2984 0.983 - - - - - - - - - 0.983 pentraxin 3 [Source:NCBI gene;Acc:548626]
62. SGSH ENSGALG00000007027 1115 0.983 - - - - - - - - - 0.983 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
63. MYH1D ENSGALG00000027323 365 0.983 - - - - - - - - - 0.983 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
64. MTSS1 ENSGALG00000041969 1312 0.983 - - - - - - - - - 0.983 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
65. NARS ENSGALG00000040506 9506 0.983 - - - - - - - - - 0.983 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
66. TBC1D19 ENSGALG00000029673 1868 0.982 - - - - - - - - - 0.982 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
67. HYAL3 ENSGALG00000029000 712 0.982 - - - - - - - - - 0.982 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
68. FASTKD3 ENSGALG00000033521 1186 0.982 - - - - - - - - - 0.982 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
69. PROM1 ENSGALG00000014496 2494 0.982 - - - - - - - - - 0.982 prominin 1 [Source:NCBI gene;Acc:422825]
70. C14orf80 C14orf80 1921 0.981 - - - - - - - - - 0.981
71. RTN4R ENSGALG00000007732 1515 0.981 - - - - - - - - - 0.981 reticulon 4 receptor
72. ASAP2 ENSGALG00000016419 1393 0.98 - - - - - - - - - 0.980 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
73. DIAPH3 ENSGALG00000016937 1069 0.98 - - - - - - - - - 0.980 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
74. ZFR ENSGALG00000003235 8466 0.98 - - - - - - - - - 0.980 zinc finger RNA binding protein, transcript variant X3
75. SLC2A3 SLC2A3 527 0.979 - - - - - - - - - 0.979
76. MGA 1911 0.979 - - - - - - - - - 0.979 MGA, MAX dimerization protein, transcript variant X15
77. AGGF1 ENSGALG00000004311 3011 0.978 - - - - - - - - - 0.978 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
78. GRK4 ENSGALG00000015645 1065 0.978 - - - - - - - - - 0.978 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
79. SMC6 ENSGALG00000016467 3321 0.977 - - - - - - - - - 0.977 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
80. CCDC88A ENSGALG00000043587 2208 0.977 - - - - - - - - - 0.977 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
81. LRRN4 ENSGALG00000008815 481 0.977 - - - - - - - - - 0.977 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
82. PLA2G15 ENSGALG00000041787 762 0.976 - - - - - - - - - 0.976 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
83. ERI2 1087 0.976 - - - - - - - - - 0.976 ERI1 exoribonuclease family member 2, transcript variant X1
84. TANGO2 ENSGALG00000002056 1971 0.975 - - - - - - - - - 0.975 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
85. ZNF106 ENSGALG00000009081 1520 0.975 - - - - - - - - - 0.975 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
86. PPM1E ENSGALG00000005061 2606 0.975 - - - - - - - - - 0.975 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
87. PDPN ENSGALG00000030096 647 0.974 - - - - - - - - - 0.974 podoplanin, transcript variant X4
88. CPNE1 ENSGALG00000040856 610 0.974 - - - - - - - - - 0.974 copine 1 [Source:NCBI gene;Acc:419134]
89. FBXO21 ENSGALG00000008201 2608 0.974 - - - - - - - - - 0.974 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
90. MRPL50 ENSGALG00000015543 11649 0.973 - - - - - - - - - 0.973 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
91. HOTAIRM1 HOTAIRM1 4335 0.973 - - - - - - - - - 0.973
92. ACADL ENSGALG00000002891 8058 0.973 - - - - - - - - - 0.973 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
93. CCDC51 ENSGALG00000006465 1845 0.973 - - - - - - - - - 0.973 coiled-coil domain containing 51, transcript variant X1
94. ESRRG ENSGALG00000009645 2783 0.973 - - - - - - - - - 0.973 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
95. SSR2 ENSGALG00000000764 32190 0.973 - - - - - - - - - 0.973 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
96. GXYLT1 ENSGALG00000009532 5682 0.972 - - - - - - - - - 0.972 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
97. HABP4 ENSGALG00000012628 2894 0.971 - - - - - - - - - 0.971 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
98. HDAC2 ENSGALG00000014991 23458 0.97 - - - - - - - - - 0.970 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
99. FREM3 ENSGALG00000020561 1824 0.97 - - - - - - - - - 0.970 FRAS1 related extracellular matrix 3
100. SPDL1 ENSGALG00000001942 4403 0.97 - - - - - - - - - 0.970 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA