Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FREM3

Gene Name Gene ID Reads Annotation
FREM3 ENSGALG00000020561 1824 FRAS1 related extracellular matrix 3











Genes with expression patterns similar to FREM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FREM3 ENSGALG00000020561 1824 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FRAS1 related extracellular matrix 3
2. MYEOV2 MYEOV2 5155 2.485 - - - - - - 0.921 0.725 - 0.839
3. WHSC1 1712 1.904 - - - - - - 0.926 - - 0.978 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
4. TP53BP1 ENSGALG00000042201 708 1.899 - - - - - - 0.930 - - 0.969 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
5. ASAP2 ENSGALG00000016419 1393 1.888 - - - - - - 0.909 - - 0.979 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
6. OSBPL1A ENSGALG00000015086 2702 1.852 - - - - - - 0.904 - - 0.948 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
7. PWP1 ENSGALG00000012631 10536 1.775 - - - - - - 0.885 - - 0.890 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
8. CNTRL ENSGALG00000001513 1773 1.744 - - - - - - - - 0.765 0.979 centriolin [Source:NCBI gene;Acc:417121]
9. PTX3 ENSGALG00000028284 2984 1.736 - - - - - - - - 0.769 0.967 pentraxin 3 [Source:NCBI gene;Acc:548626]
10. CASP8AP2 ENSGALG00000015611 5657 1.733 - - - - - - 0.805 - - 0.928 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
11. HDHD1 HDHD1 2928 1.717 - - - - - - - - 0.804 0.913
12. LRRN4 ENSGALG00000008815 481 1.708 - - - - - - - - 0.729 0.979 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
13. ZDHHC13 ENSGALG00000004085 1802 1.689 - - - - - - 0.913 - 0.776 - zinc finger DHHC-type containing 13 [Source:NCBI gene;Acc:422980]
14. RHOT1 ENSGALG00000003397 5149 1.687 - - - - - - 0.738 - - 0.949 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
15. GPX8 ENSGALG00000026704 4497 1.68 - - - - - - 0.777 - - 0.903 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
16. QSER1 ENSGALG00000012030 4490 1.679 - - - - - - 0.859 - - 0.820 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
17. PGD ENSGALG00000002797 15115 1.654 - - - - - - 0.700 - - 0.954 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
18. MYO5A ENSGALG00000031987 2469 1.652 - - - - - - - - 0.827 0.825 myosin VA [Source:NCBI gene;Acc:396237]
19. RIN2 ENSGALG00000008457 2661 1.638 - - - - - - - 0.738 - 0.900 Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
20. ENSGALG00000026433 ENSGALG00000026433 14463 1.628 - - - - - - 0.718 - - 0.910
21. POLR3F ENSGALG00000008749 5645 1.627 - - - - - - 0.852 - 0.775 - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
22. TBPL1 ENSGALG00000013981 3710 1.626 - - - - - - 0.794 - - 0.832 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
23. RPL22 ENSGALG00000000719 74238 1.625 - - - - - - 0.840 - - 0.785 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
24. CALCOCO2 ENSGALG00000001525 3121 1.604 - - - - - - 0.882 - 0.722 - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
25. IFT81 ENSGALG00000003854 2534 1.568 - - - - - - 0.862 - 0.706 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
26. UFL1 ENSGALG00000015580 3845 1.568 - - - - - - 0.859 - 0.709 - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
27. ADIPOR2 ENSGALG00000035533 6523 1.563 - - - - - - 0.805 - - 0.758 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
28. HM13 ENSGALG00000006207 8354 1.555 - - - 0.765 - - - - - 0.790 histocompatibility minor 13 [Source:HGNC Symbol;Acc:HGNC:16435]
29. UPF2 ENSGALG00000033772 9548 1.55 - - - - - - - - 0.731 0.819 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
30. NAP1L1 ENSGALG00000010238 14506 1.532 - - - - - - - - 0.746 0.786 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
31. ENSGALG00000028938 ENSGALG00000028938 18616 1.528 - - - - - - - 0.725 - 0.803
32. LMBRD1 ENSGALG00000016174 3469 1.517 - - - - - - 0.816 0.701 - - LMBR1 domain containing 1 [Source:NCBI gene;Acc:421874]
33. VAPB ENSGALG00000007549 15511 1.509 - - - - - - 0.737 - - 0.772 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
34. BCL9 ENSGALG00000037655 4620 1.506 - - - - - - 0.728 - - 0.778 B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
35. MT-ND4L MT-ND4L 12537 1.451 - - - - - - 0.702 - 0.749 -
36. FSTL4 ENSGALG00000031487 529 0.985 - - - - - - - - - 0.985 follistatin like 4 [Source:NCBI gene;Acc:395163]
37. WDSUB1 ENSGALG00000012574 2038 0.985 - - - - - - - - - 0.985 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
38. C10orf118 C10orf118 762 0.984 - - - - - - - - - 0.984
39. BRD1 ENSGALG00000029379 6047 0.983 - - - - - - - - - 0.983 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
40. ASB3 ENSGALG00000008176 5422 0.983 - - - - - - - - - 0.983 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
41. DIAPH3 ENSGALG00000016937 1069 0.983 - - - - - - - - - 0.983 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
42. ITSN2 ENSGALG00000016504 651 0.982 - - - - - - - - - 0.982 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
43. SSH1 ENSGALG00000004928 222 0.981 - - - - - - - - - 0.981 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
44. FAM129A ENSGALG00000004812 269 0.98 - - - - - - - - - 0.980 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
45. AURKA ENSGALG00000007768 793 0.98 - - - - - - - - - 0.980 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
46. ARHGAP21 ENSGALG00000007721 3961 0.979 - - - - - - - - - 0.979 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
47. CPNE2 ENSGALG00000001316 236 0.979 - - - - - - - - - 0.979 copine 2 [Source:NCBI gene;Acc:415646]
48. MSI1 ENSGALG00000007227 2279 0.979 - - - - - - - - - 0.979 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
49. PCLO 249 0.979 - - - - - - - - - 0.979 piccolo presynaptic cytomatrix protein
50. APBA3 ENSGALG00000000740 1249 0.979 - - - - - - - - - 0.979 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
51. 5S_2 5S_2 58 0.979 - - - - - - - - - 0.979
52. MTSS1 ENSGALG00000041969 1312 0.978 - - - - - - - - - 0.978 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
53. IL10R2 IL10R2 72 0.978 - - - - - - - - - 0.978
54. ZNF6 ZNF6 138 0.978 - - - - - - - - - 0.978
55. SOX6 ENSGALG00000006074 102 0.978 - - - - - - - - - 0.978 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
56. CXADR ENSGALG00000015701 96 0.978 - - - - - - - - - 0.978 coxsackie virus and adenovirus receptor, transcript variant X2
57. HAUS8 ENSGALG00000003727 351 0.977 - - - - - - - - - 0.977 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
58. FAM190B FAM190B 165 0.977 - - - - - - - - - 0.977
59. RWDD2B ENSGALG00000015807 3601 0.976 - - - - - - - - - 0.976 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
60. FASTKD3 ENSGALG00000033521 1186 0.976 - - - - - - - - - 0.976 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
61. PM20D2 ENSGALG00000015779 1301 0.976 - - - - - - - - - 0.976 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
62. NARS ENSGALG00000040506 9506 0.975 - - - - - - - - - 0.975 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
63. CASKIN1 604 0.975 - - - - - - - - - 0.975 CASK interacting protein 1, transcript variant X4
64. MYH1D ENSGALG00000027323 365 0.975 - - - - - - - - - 0.975 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
65. AGGF1 ENSGALG00000004311 3011 0.975 - - - - - - - - - 0.975 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
66. IDS ENSGALG00000009154 1177 0.975 - - - - - - - - - 0.975 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
67. PROM1 ENSGALG00000014496 2494 0.973 - - - - - - - - - 0.973 prominin 1 [Source:NCBI gene;Acc:422825]
68. MGA 1911 0.973 - - - - - - - - - 0.973 MGA, MAX dimerization protein, transcript variant X15
69. HEXA ENSGALG00000043828 4789 0.973 - - - - - - - - - 0.973 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
70. ENSGALG00000005389 ENSGALG00000005389 553 0.972 - - - - - - - - - 0.972
71. ITGA9 ENSGALG00000029378 415 0.972 - - - - - - - - - 0.972 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
72. CRYM ENSGALG00000002484 3558 0.972 - - - - - - - - - 0.972 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
73. INTS10 ENSGALG00000010130 6320 0.972 - - - - - - - - - 0.972 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
74. CCT8 ENSGALG00000015821 12161 0.972 - - - - - - - - - 0.972 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
75. RTN4R ENSGALG00000007732 1515 0.971 - - - - - - - - - 0.971 reticulon 4 receptor
76. PLA2G15 ENSGALG00000041787 762 0.971 - - - - - - - - - 0.971 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
77. CDH1-A CDH1-A 343 0.971 - - - - - - - - - 0.971
78. FBLIM1 ENSGALG00000003636 1498 0.97 - - - - - - - - - 0.970 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
79. SLC2A3 SLC2A3 527 0.97 - - - - - - - - - 0.970
80. PDPN ENSGALG00000030096 647 0.97 - - - - - - - - - 0.970 podoplanin, transcript variant X4
81. FRMD3 ENSGALG00000012577 999 0.97 - - - - - - - - - 0.970 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
82. PREX2 ENSGALG00000042354 134 0.97 - - - - - - - - - 0.970 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
83. CCDC51 ENSGALG00000006465 1845 0.969 - - - - - - - - - 0.969 coiled-coil domain containing 51, transcript variant X1
84. MRPL50 ENSGALG00000015543 11649 0.969 - - - - - - - - - 0.969 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
85. FBXO38 ENSGALG00000038627 2658 0.968 - - - - - - - - - 0.968 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
86. ASB9 ENSGALG00000016563 2780 0.968 - - - - - - - - - 0.968 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
87. ARPC1B ENSGALG00000032588 2407 0.967 - - - - - - - - - 0.967 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
88. ZFR ENSGALG00000003235 8466 0.966 - - - - - - - - - 0.966 zinc finger RNA binding protein, transcript variant X3
89. CPNE1 ENSGALG00000040856 610 0.966 - - - - - - - - - 0.966 copine 1 [Source:NCBI gene;Acc:419134]
90. SLC39A13 ENSGALG00000008122 2003 0.965 - - - - - - - - - 0.965 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
91. SGSH ENSGALG00000007027 1115 0.965 - - - - - - - - - 0.965 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
92. CCDC88A ENSGALG00000043587 2208 0.965 - - - - - - - - - 0.965 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
93. HYAL3 ENSGALG00000029000 712 0.965 - - - - - - - - - 0.965 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
94. ANKRD17 ENSGALG00000011642 3192 0.964 - - - - - - - - - 0.964 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
95. C14orf80 C14orf80 1921 0.964 - - - - - - - - - 0.964
96. TBC1D19 ENSGALG00000029673 1868 0.964 - - - - - - - - - 0.964 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
97. SSR2 ENSGALG00000000764 32190 0.963 - - - - - - - - - 0.963 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
98. TMEM130 ENSGALG00000003569 949 0.963 - - - - - - - - - 0.963 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
99. GRTP1 ENSGALG00000016828 3145 0.963 - - - - - - - - - 0.963 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
100. HDAC2 ENSGALG00000014991 23458 0.963 - - - - - - - - - 0.963 histone deacetylase 2 [Source:NCBI gene;Acc:395635]

There are 859 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA