Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for FOXRED1

Gene Name Gene ID Reads Annotation
FOXRED1 ENSGALG00000046347 4176 FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]











Genes with expression patterns similar to FOXRED1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FOXRED1 ENSGALG00000046347 4176 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
2. ADAP2 ENSGALG00000003319 134 1.737 - - - - - 0.764 0.973 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
3. FA2H ENSGALG00000002775 396 1.553 - - - - - 0.851 0.702 - - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
4. PITPNM2 ENSGALG00000003645 17 1.547 - - - - - - - 0.772 - 0.775 phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
5. C10orf118 C10orf118 762 1.511 - - - - - 0.703 0.808 - - -
6. ARHGEF9 ENSGALG00000007608 243 1.508 - - - - - 0.772 0.736 - - - Cdc42 guanine nucleotide exchange factor 9 [Source:HGNC Symbol;Acc:HGNC:14561]
7. MAP3K19 ENSGALG00000028457 17 0.983 - - - - - - 0.983 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
8. CBLN1 ENSGALG00000042664 15 0.983 - - - - - - 0.983 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
9. PANX1 ENSGALG00000039751 70 0.983 - - - - - - 0.983 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
10. SLC16A14 ENSGALG00000002897 157 0.983 - - - - - - 0.983 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
11. MBL2 ENSGALG00000002507 17 0.983 - - - - - - 0.983 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
12. CHST9 ENSGALG00000019489 21 0.983 - - - - - - 0.983 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
13. FAM46C 13 0.983 - - - - - - 0.983 - - - family with sequence similarity 46 member C
14. HN1L HN1L 247 0.979 - - - - - - 0.979 - - -
15. SYT8 ENSGALG00000006602 369 0.978 - - - - - - 0.978 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
16. EFCAB7 ENSGALG00000010998 13 0.977 - - - - - - 0.977 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
17. KIAA1244 KIAA1244 62 0.976 - - - - - - 0.976 - - -
18. PTPN21 ENSGALG00000010616 129 0.975 - - - - - - 0.975 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
19. SCTR ENSGALG00000012106 49 0.972 - - - - - - 0.972 - - - secretin receptor [Source:NCBI gene;Acc:770943]
20. CAT-1 CAT-1 115 0.969 - - - - - - 0.969 - - -
21. MTOR ENSGALG00000003339 328 0.969 - - - - - - 0.969 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
22. RNF170 ENSGALG00000015386 296 0.966 - - - - - - 0.966 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
23. ARHGAP12 ENSGALG00000007254 479 0.966 - - - - - - 0.966 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
24. CXADR ENSGALG00000015701 96 0.963 - - - - - - 0.963 - - - coxsackie virus and adenovirus receptor, transcript variant X2
25. SLC2A9 ENSGALG00000014971 751 0.957 - - - - - - 0.957 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
26. LYRM1 ENSGALG00000002273 1523 0.957 - - - - - - 0.957 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
27. PLK4 ENSGALG00000010195 514 0.956 - - - - - - 0.956 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
28. AFG3L2 ENSGALG00000013853 1138 0.95 - - - - - - 0.950 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
29. TAP1 ENSGALG00000035075 54 0.947 - - - - - - 0.947 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
30. CCDC173 358 0.941 - - - - - - 0.941 - - - coiled-coil domain containing 173
31. NCOA5 ENSGALG00000007009 299 0.941 - - - - - - 0.941 - - - nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:HGNC:15909]
32. TFB1M ENSGALG00000013647 84 0.94 - - - - - - 0.940 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
33. WDR35 157 0.94 - - - - - - 0.940 - - - WD repeat domain 35, transcript variant X1
34. TP73 ENSGALG00000001006 335 0.939 - - - - - - 0.939 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
35. GRID1 ENSGALG00000037366 159 0.935 - - - - - - 0.935 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
36. LOC419074 ENSGALG00000017336 1885 0.934 - - - - - - 0.934 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
37. IQCH ENSGALG00000007909 128 0.933 - - - - - - 0.933 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
38. LOC112532477 ENSGALG00000027520 40 0.932 - - - - - - 0.932 - - - fibrinogen-like protein 1-like protein
39. RPE65 ENSGALG00000011259 51 0.932 - - - - - - 0.932 - - - RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
40. LOC769139 ENSGALG00000026754 753 0.931 - - - - - - 0.931 - - - feather keratin 1-like, transcript variant X2
41. ANO6 ENSGALG00000009638 470 0.929 - - - - - - 0.929 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
42. ASH1L ENSGALG00000014638 803 0.928 - - - - - - 0.928 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
43. VWDE ENSGALG00000042443 160 0.927 - - - - - - 0.927 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
44. AAGAB ENSGALG00000007887 142 0.926 - - - - - - 0.926 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
45. FAM69A ENSGALG00000005918 157 0.924 - - - - - - 0.924 - - - family with sequence similarity 69 member A, transcript variant X4
46. ZFYVE16 ENSGALG00000015576 287 0.92 - - - - - - 0.920 - - - zinc finger FYVE-type containing 16, transcript variant X3
47. KCNK2 ENSGALG00000009687 1552 0.916 - - - - - - 0.916 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
48. C8orf34 ENSGALG00000034561 286 0.915 - - - - - - 0.915 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
49. FANCA ENSGALG00000000516 250 0.913 - - - - - - 0.913 - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
50. LGI2 ENSGALG00000043283 433 0.912 - - - - - - 0.912 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
51. GGT7 ENSGALG00000001062 476 0.909 - - - - - - 0.909 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
52. PPP2R3A ENSGALG00000034512 1091 0.907 - - - - - - 0.907 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
53. USP42 ENSGALG00000003378 1392 0.904 - - - - - - 0.904 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
54. RAB22A ENSGALG00000007554 201 0.896 - - - - - - 0.896 - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
55. AADAT ENSGALG00000009655 1692 0.891 - - - - - - 0.891 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
56. KLF4 ENSGALG00000026928 184 0.891 - - - - - - 0.891 - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
57. WSCD1 ENSGALG00000005886 539 0.886 - - - - - - 0.886 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
58. ACBD7 ENSGALG00000019663 2328 0.885 - - - - - - 0.885 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
59. TNFRSF1A ENSGALG00000039461 1569 0.885 - - - - - - 0.885 - - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
60. TMEM65 ENSGALG00000037371 776 0.882 - - - - - - 0.882 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
61. C12H3ORF19 C12H3ORF19 1278 0.881 - - - - - - 0.881 - - -
62. RASA1 ENSGALG00000017706 224 0.881 - - - - - - 0.881 - - - RAS p21 protein activator 1
63. SMAD3 ENSGALG00000035701 161 0.879 - - - - - - 0.879 - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
64. CENPT ENSGALG00000028900 674 0.877 - - - - - - 0.877 - - - centromere protein T [Source:NCBI gene;Acc:415654]
65. ENKUR ENSGALG00000007680 637 0.875 - - - - - - 0.875 - - - enkurin, TRPC channel interacting protein [Source:HGNC Symbol;Acc:HGNC:28388]
66. SLCO3A1 ENSGALG00000006871 1125 0.873 - - - - - - 0.873 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]
67. SNX10 ENSGALG00000011046 333 0.871 - - - - - - 0.871 - - - sorting nexin 10 [Source:NCBI gene;Acc:420628]
68. PCDH11X ENSGALG00000006851 314 0.87 - - - - - - 0.870 - - - protocadherin 11 X-linked, transcript variant X1
69. ENSGALG00000020779 ENSGALG00000020779 19 0.869 - - - - - 0.869 - - - -
70. SMARCD3 ENSGALG00000043137 401 0.866 - - - - - - 0.866 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
71. TTC38 ENSGALG00000014551 1135 0.864 - - - - - - 0.864 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
72. KCNJ15 ENSGALG00000016055 66 0.861 - - - - - 0.861 - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
73. DUSP10 ENSGALG00000009450 1041 0.858 - - - - - - 0.858 - - - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
74. ZNF618 ENSGALG00000008886 1326 0.856 - - - - - - 0.856 - - - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
75. TMEM82 16 0.856 - - - - - 0.856 - - - - transmembrane protein 82, transcript variant X2
76. PRKCB ENSGALG00000037943 29 0.856 - - - - - 0.856 - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
77. PKIB ENSGALG00000027036 1663 0.856 - - - - - - 0.856 - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
78. ENSGALG00000004703 ENSGALG00000004703 112 0.855 - - - - - - 0.855 - - -
79. C21orf62 ENSGALG00000040059 5 0.853 - - - - - 0.853 - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
80. ENSGALG00000006504 ENSGALG00000006504 3 0.853 - - - - - 0.853 - - - -
81. STEAP1 ENSGALG00000009006 16 0.853 - - - - - 0.853 - - - - STEAP family member 1
82. ADAMTS12 55 0.853 - - - - - 0.853 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
83. FTO ENSGALG00000041036 11 0.853 - - - - - 0.853 - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
84. SMOX ENSGALG00000015977 18 0.853 - - - - - 0.853 - - - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
85. ENSGALG00000004619 ENSGALG00000004619 3 0.853 - - - - - 0.853 - - - -
86. NSUN7 ENSGALG00000014264 4 0.853 - - - - - 0.853 - - - - NOP2/Sun RNA methyltransferase family member 7 [Source:HGNC Symbol;Acc:HGNC:25857]
87. SLC35F5 ENSGALG00000012166 25 0.853 - - - - - 0.853 - - - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
88. ENSGALG00000007846 ENSGALG00000007846 2 0.853 - - - - - 0.853 - - - -
89. PLCZ1 ENSGALG00000013123 3 0.853 - - - - - 0.853 - - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
90. H2A-VII ENSGALG00000027113, ENSGALG00000027315, ENSGALG00000028372, ENSGALG00000029941, ENSGALG00000031571, ENSGALG00000032645, ENSGALG00000035715 823 0.852 - - - - - - 0.852 - - - histone cluster 1, H2A-IV-like 4 [Source:NCBI gene;Acc:427895]
91. CYR61 ENSGALG00000008661 43 0.849 - - - - - 0.849 - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
92. GANC ENSGALG00000009036 731 0.848 - - - - - - 0.848 - - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
93. ELAVL2 ENSGALG00000015799 585 0.848 - - - - - - 0.848 - - - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
94. PIBF1 ENSGALG00000016929 593 0.847 - - - - - - 0.847 - - - progesterone immunomodulatory binding factor 1 [Source:HGNC Symbol;Acc:HGNC:23352]
95. PTK2B ENSGALG00000016564 406 0.846 - - - - - 0.846 - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
96. GP1BB ENSGALG00000021529 348 0.846 - - - - - 0.846 - - - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
97. MYF5 ENSGALG00000028091 1965 0.844 - - - - - - 0.844 - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
98. TTC12 1384 0.843 - - - - - - 0.843 - - - tetratricopeptide repeat domain 12, transcript variant X4
99. ANAPC7 ENSGALG00000003826 5484 0.842 - - - - - - 0.842 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
100. FBXL4 ENSGALG00000015490 12 0.841 - - - - - 0.841 - - - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]

There are 259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA