Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for FOXJ3

Gene Name Gene ID Reads Annotation
FOXJ3 ENSDARG00000075774 197 forkhead box J3 [Source:ZFIN;Acc:ZDB-GENE-101005-1]










Genes with expression patterns similar to FOXJ3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. FOXJ3 ENSDARG00000075774 197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box J3 [Source:ZFIN;Acc:ZDB-GENE-101005-1]
2. tbx6 ENSDARG00000011785 132 1.666 - 0.790 0.876 - - - - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
3. C25H11orf74 C25H11orf74 161 1.584 - - 0.843 - - - - - 0.741
4. mir301c 84 1.541 - - - - - - 0.796 - 0.745 microRNA 301c
5. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 1.538 - - 0.742 - - - 0.796 - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
6. dctn1a ENSDARG00000019743 45 1.53 - 0.710 0.820 - - - - - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
7. arsk ENSDARG00000059714, ENSDARG00000115105 31 1.496 - - - 0.787 - 0.709 - - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
8. si:ch211-117n7.8 si:ch211-117n7.8 83 1.491 - 0.753 0.738 - - - - - -
9. CU638740.3 CU638740.3 164 1.488 - 0.776 - 0.712 - - - - -
10. mlh1 ENSDARG00000025948 130 1.467 - - 0.731 0.736 - - - - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
11. cldnk ENSDARG00000042357 103 1.445 - 0.741 - 0.704 - - - - - claudin k [Source:ZFIN;Acc:ZDB-GENE-040801-201]
12. pnpla8 ENSDARG00000078745 326 1.433 0.727 0.706 - - - - - - - patatin-like phospholipase domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070705-553]
13. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 1.419 - 0.707 0.712 - - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
14. prkchb ENSDARG00000043243 126 1.418 - 0.707 - - - 0.711 - - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
15. hoxa13b ENSDARG00000036254 404 1.416 - 0.707 - - - 0.709 - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
16. si:ch211-158c3.1 si:ch211-158c3.1 37 0.92 - - 0.920 - - - - - -
17. ttc12 ENSDARG00000056896 97 0.92 - - 0.920 - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
18. si:dkey-176f19.5 si:dkey-176f19.5 10 0.914 - - 0.914 - - - - - -
19. SETDB2 ENSDARG00000101462 249 0.909 - - - - - - 0.909 - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
20. pgm2l1 ENSDARG00000014704 140 0.906 - - - - - 0.906 - - - phosphoglucomutase 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-041008-205]
21. si:dkey-17e16.18 47 0.9 - - 0.900 - - - - - - si:dkey-17e16.18
22. TEKT4 ENSDARG00000028899 47 0.9 - - 0.900 - - - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
23. impa2 ENSDARG00000059411 210 0.899 - 0.899 - - - - - - - inositol(myo)-1(or 4)-monophosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-349]
24. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 0.898 - - 0.898 - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
25. ENSDARG00000089996 ENSDARG00000089996 17 0.898 - - 0.898 - - - - - -
26. si:ch211-188c16.1 ENSDARG00000077288 16 0.898 - - 0.898 - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
27. si:dkey-285e18.5 ENSDARG00000093665 5 0.898 - - 0.898 - - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
28. Metazoa_SRP_13 Metazoa_SRP_13 7 0.898 - - 0.898 - - - - - -
29. si:ch1073-312b22.1 si:ch1073-312b22.1 6 0.898 - - 0.898 - - - - - -
30. si:ch211-283e2.7 19 0.897 - - 0.897 - - - - - - si:ch211-283e2.7, transcript variant X2
31. aatka ENSDARG00000078222 218 0.897 - 0.897 - - - - - - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
32. tecrl2a ENSDARG00000089485 12 0.897 - - 0.897 - - - - - - trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138]
33. radil ENSDARG00000079779 14 0.896 - - 0.896 - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
34. ddx43 ENSDARG00000022614 48 0.896 - - 0.896 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
35. ppp1r3da ENSDARG00000077513 109 0.895 - - 0.895 - - - - - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
36. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 0.895 - - 0.895 - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
37. BX469922.1 BX469922.1 133 0.891 - - 0.891 - - - - - -
38. fut7 ENSDARG00000044775 25 0.89 - - 0.890 - - - - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
39. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.888 - - 0.888 - - - - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
40. cdc14aa ENSDARG00000013858 18 0.885 - - 0.885 - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
41. si:dkey-176f19.1 ENSDARG00000101463 27 0.885 - - 0.885 - - - - - - si:dkey-176f19.1 [Source:ZFIN;Acc:ZDB-GENE-110914-124]
42. NBL1 428 0.884 - - 0.884 - - - - - - neuroblastoma 1, DAN family BMP antagonist
43. wfikkn2b ENSDARG00000059139 45 0.884 - - 0.884 - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
44. CR352225.2 CR352225.2 1138 0.882 - - - - - - 0.882 - -
45. CABZ01005777.1 CABZ01005777.1 505 0.876 - 0.876 - - - - - - -
46. si:dkey-66n24.2 si:dkey-66n24.2 69 0.875 - - 0.875 - - - - - -
47. npffr2.1 npffr2.1 60 0.874 - - 0.874 - - - - - -
48. mycbpap ENSDARG00000069194 32 0.873 - - 0.873 - - - - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
49. CABZ01039859.1 ENSDARG00000076361 540 0.871 0.871 - - - - - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
50. mark4a ENSDARG00000023914, ENSDARG00000112220 445 0.87 - 0.870 - - - - - - - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
51. tefb ENSDARG00000098103 370 0.868 - 0.868 - - - - - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
52. dnah9l ENSDARG00000062630 268 0.868 - 0.868 - - - - - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
53. tmem205 ENSDARG00000100677 101 0.867 - 0.867 - - - - - - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
54. si:dkey-113d16.9 si:dkey-113d16.9 345 0.866 - - 0.866 - - - - - -
55. napepld ENSDARG00000009252 228 0.865 - - 0.865 - - - - - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
56. CABZ01049057.1 CABZ01049057.1 479 0.864 - - 0.864 - - - - - -
57. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 0.861 - - 0.861 - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
58. zmym2 ENSDARG00000027353 96 0.86 - 0.860 - - - - - - - zinc finger, MYM-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2408]
59. npas2 ENSDARG00000016536, ENSDARG00000116993 35 0.86 - - 0.860 - - - - - - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
60. RBMS1 RBMS1 258 0.859 - - - - 0.859 - - - -
61. pfkfb1 ENSDARG00000037140 182 0.857 - - 0.857 - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
62. cenpp ENSDARG00000044135 96 0.854 - - - - - - 0.854 - - centromere protein P [Source:ZFIN;Acc:ZDB-GENE-040801-74]
63. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 0.852 - - 0.852 - - - - - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
64. si:dkey-225f23.4 ENSDARG00000102520 86 0.851 - - 0.851 - - - - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
65. dscc1 ENSDARG00000019907 720 0.85 - 0.850 - - - - - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
66. ube2t ENSDARG00000063285 716 0.85 - 0.850 - - - - - - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
67. BX005069.4 BX005069.4 61 0.85 - 0.850 - - - - - - -
68. CU075695.3 CU075695.3 253 0.849 - - 0.849 - - - - - -
69. nceh1a ENSDARG00000020427 35 0.848 - - 0.848 - - - - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
70. AL840631.3 AL840631.3 82 0.846 - 0.846 - - - - - - -
71. TRAPPC10 ENSDARG00000098118 954 0.846 - 0.846 - - - - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
72. dennd1b ENSDARG00000101868 328 0.846 - 0.846 - - - - - - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
73. si:ch211-87m7.2 ENSDARG00000030129 223 0.845 - - - - - 0.845 - - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
74. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.844 - - 0.844 - - - - - - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
75. shq1 ENSDARG00000058522 123 0.844 - - - - - 0.844 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
76. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 0.843 - 0.843 - - - - - - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
77. dcp1a ENSDARG00000100136 714 0.841 - 0.841 - - - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
78. cicb ENSDARG00000055502 1356 0.84 - 0.840 - - - - - - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
79. si:dkeyp-69c1.9 ENSDARG00000091888 39 0.838 - - 0.838 - - - - - - si:dkeyp-69c1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1774]
80. srbd1 ENSDARG00000079827 154 0.836 - - - - - 0.836 - - - S1 RNA binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-081107-19]
81. ccnf ENSDARG00000105046 1790 0.836 - 0.836 - - - - - - - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
82. zgc:112083 ENSDARG00000037405 306 0.835 - 0.835 - - - - - - - zgc:112083 [Source:ZFIN;Acc:ZDB-GENE-050417-284]
83. MED8 ENSDARG00000114425 459 0.835 - 0.835 - - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
84. CCDC138 CCDC138 73 0.834 - 0.834 - - - - - - -
85. zgc:173556 82 0.832 - 0.832 - - - - - - - zgc:173556
86. si:ch211-207d6.2 ENSDARG00000031658 93 0.832 - 0.832 - - - - - - - si:ch211-207d6.2 [Source:ZFIN;Acc:ZDB-GENE-070912-185]
87. CU104716.1 ENSDARG00000109332 12 0.832 - 0.832 - - - - - - -
88. zic2b ENSDARG00000037178, ENSDARG00000112354 993 0.831 - 0.831 - - - - - - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
89. ATP5J2 68 0.83 - - 0.830 - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
90. atad1b ENSDARG00000056609 40 0.829 - - 0.829 - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
91. fbxo16 ENSDARG00000033949 35 0.829 - - 0.829 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
92. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 0.828 - 0.828 - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
93. zgc:110366 ENSDARG00000004167 314 0.828 - - - - - - 0.828 - - zgc:110366 [Source:ZFIN;Acc:ZDB-GENE-050417-302]
94. xirp2b ENSDARG00000091090 759 0.828 - - - - - - 0.828 - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
95. eri1 ENSDARG00000044692, ENSDARG00000110387, ENSDARG00000116810 667 0.827 - - - - - 0.827 - - - exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-050522-39]
96. CABZ01097761.1 ENSDARG00000116119 445 0.826 - 0.826 - - - - - - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
97. si:dkey-9i23.6 ENSDARG00000094678 58 0.826 - - 0.826 - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
98. mrps22_1 ENSDARG00000018073, ENSDARG00000115927 104 0.825 - 0.825 - - - - - - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
99. CCDC150 CCDC150 991 0.825 - 0.825 - - - - - - -
100. nrxn1b ENSDARG00000063635, ENSDARG00000111881 102 0.825 - 0.825 - - - - - - - neurexin 1b [Source:ZFIN;Acc:ZDB-GENE-070206-3]

There are 642 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA