Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FNDC1

Gene Name Gene ID Reads Annotation
FNDC1 ENSGALG00000011663 1040 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]











Genes with expression patterns similar to FNDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FNDC1 ENSGALG00000011663 1040 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
2. SPON2 ENSGALG00000038433 1240 2.376 - - - - - - 0.710 0.940 - 0.726 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
3. C9H2ORF82 ENSGALG00000040264 4201 1.696 - - - - - - - 0.894 - 0.802 chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
4. COL9A3 ENSGALG00000005628 2842 1.663 - - - - - - - 0.937 - 0.726 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
5. ACAN ENSGALG00000006725 184 1.641 - - - - - - - 0.854 - 0.787 aggrecan [Source:NCBI gene;Acc:395798]
6. SCARA3 ENSGALG00000026651 2559 1.614 - - - - - - - 0.811 - 0.803 scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
7. TAC1 ENSGALG00000009737 2211 1.599 - - - - - - 0.744 0.855 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
8. PCDH17 ENSGALG00000016941 1006 1.598 - - - - - - - 0.867 - 0.731 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
9. COL8A1 ENSGALG00000015253 2505 1.59 - - - - 0.726 - - 0.864 - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
10. SLC6A1 ENSGALG00000004921 118 1.56 - - - - - - - 0.783 - 0.777 solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
11. SAMD3 ENSGALG00000032409 459 0.992 - - - - - - - 0.992 - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
12. PIGM ENSGALG00000010768 41 0.985 - - - - - - - 0.985 - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
13. RASGRF2 ENSGALG00000015598 30 0.985 - - - - - - - 0.985 - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
14. OCA2 ENSGALG00000016740 421 0.973 - - - - - - - 0.973 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
15. RAB38 ENSGALG00000028018 1046 0.963 - - - - - - - 0.963 - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
16. GPR158 ENSGALG00000007667 111 0.948 - - - - - - - 0.948 - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
17. TIMP3 ENSGALG00000028627 8706 0.946 - - - - - - - 0.946 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
18. COL9A2 ENSGALG00000027526 4685 0.926 - - - - - - - 0.926 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
19. NCBP2 ENSGALG00000006843 938 0.923 - - - - - - - 0.923 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
20. GEMIN8 ENSGALG00000016574 18 0.917 - - - - - - - 0.917 - - gem nuclear organelle associated protein 8 [Source:HGNC Symbol;Acc:HGNC:26044]
21. SST ENSGALG00000007361 1383 0.901 - - - - - - - 0.901 - - somatostatin [Source:NCBI gene;Acc:396279]
22. LECT1 LECT1 12694 0.878 - - - - - - - 0.878 - -
23. OSF-2 OSF-2 10433 0.866 - - - - - - - 0.866 - -
24. DCLRE1B ENSGALG00000028626 48 0.863 - - - - - - - 0.863 - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
25. SERPINF1 ENSGALG00000003015 5123 0.859 - - - - - - - - - 0.859 serpin family F member 1 [Source:NCBI gene;Acc:417561]
26. CCDC3 ENSGALG00000030140 258 0.855 - - - - - - - - - 0.855 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
27. GNOT1 GNOT1 22 0.855 - - - - - - - 0.855 - -
28. POMC ENSGALG00000016600 99 0.854 - - - - - - - 0.854 - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
29. MYOG ENSGALG00000000172 460 0.83 - - - - - - - - - 0.830 myogenin [Source:NCBI gene;Acc:374004]
30. EDAR ENSGALG00000016809 81 0.829 - - - - - - - 0.829 - - ectodysplasin A receptor [Source:NCBI gene;Acc:428015]
31. SMC1B ENSGALG00000014228 19 0.813 - - - - - - - 0.813 - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
32. EPN3 ENSGALG00000023279 10 0.809 - - - - - - - 0.809 - - epsin 3 [Source:HGNC Symbol;Acc:HGNC:18235]
33. TNS3 ENSGALG00000039139 63 0.809 - - - - - - - 0.809 - - tensin 3 [Source:NCBI gene;Acc:420792]
34. SRMS ENSGALG00000005852 174 0.809 - - - - - - - 0.809 - - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
35. U2_1 U2_1 13 0.809 - - - - - - - 0.809 - -
36. gga-mir-6561 ENSGALG00000026650 135 0.809 - - - - - - - 0.809 - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
37. ITGA2 ENSGALG00000014903 31 0.809 - - - - - - - 0.809 - - integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]
38. ENSGALG00000007420 ENSGALG00000007420 7 0.809 - - - - - - - 0.809 - -
39. WDR27 ENSGALG00000037464 9 0.809 - - - - - - - 0.809 - - WD repeat domain 27
40. UCP3 ENSGALG00000017316 30 0.809 - - - - - - - 0.809 - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
41. SNAPC1 ENSGALG00000011868 65 0.808 - - - - - - - 0.808 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
42. MAVS ENSGALG00000040428 1 0.808 - - - - - - - 0.808 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
43. TOR1BL ENSGALG00000023709 1 0.808 - - - - - - - 0.808 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
44. ECT2 ENSGALG00000009157 31 0.808 - - - - - - - 0.808 - - epithelial cell transforming 2, transcript variant X7
45. SCN3A ENSGALG00000011040 62 0.808 - - - - - - - 0.808 - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
46. BTBD17 ENSGALG00000023359 87 0.808 - - - - - - - 0.808 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
47. CMTR1 ENSGALG00000010149 12 0.808 - - - - - - - 0.808 - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
48. FNIP1 ENSGALG00000017462 4 0.808 - - - - - - - 0.808 - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
49. SH3BP4 ENSGALG00000004140 4 0.808 - - - - - - - 0.808 - - SH3 domain binding protein 4 [Source:HGNC Symbol;Acc:HGNC:10826]
50. ABHD14A 174 0.808 - - - - - - - 0.808 - - abhydrolase domain containing 14A
51. VIL1 ENSGALG00000037286 5 0.808 - - - - - - - 0.808 - - villin 1 [Source:NCBI gene;Acc:396423]
52. CRIP2 ENSGALG00000026471 4 0.808 - - - - - - - 0.808 - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
53. C17orf105 C17orf105 11 0.808 - - - - - - - 0.808 - -
54. GIPC2 ENSGALG00000008902 6 0.808 - - - - - - - 0.808 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
55. PABPN1L ENSGALG00000006242 3 0.808 - - - - - - - 0.808 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
56. RNF215 ENSGALG00000040925 19 0.808 - - - - - - - 0.808 - - ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
57. OLFM4 ENSGALG00000016943 7 0.808 - - - - - - - 0.808 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
58. LPGAT1 ENSGALG00000009848 33 0.808 - - - - - - - 0.808 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
59. ENSGALG00000026501 ENSGALG00000026501 39 0.808 - - - - - - - 0.808 - -
60. SLC17A8 ENSGALG00000041122 57 0.808 - - - - - - - 0.808 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
61. GRK7 ENSGALG00000002800 0 0.808 - - - - - - - 0.808 - - G protein-coupled receptor kinase 7 [Source:HGNC Symbol;Acc:HGNC:17031]
62. VDHAP ENSGALG00000010417 9 0.808 - - - - - - - 0.808 - - vitamin D3 hydroxylase associated protein [Source:NCBI gene;Acc:395824]
63. SERPING1 ENSGALG00000007381 144 0.808 - - - - - - - 0.808 - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
64. HHIPL2 ENSGALG00000045729 9 0.808 - - - - - - - 0.808 - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
65. MID2 ENSGALG00000003860 3 0.808 - - - - - - - 0.808 - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
66. EFHC2 ENSGALG00000016221 8 0.808 - - - - - - - 0.808 - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
67. KREMEN1 ENSGALG00000005808 5 0.808 - - - - - - - 0.808 - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
68. SI ENSGALG00000009511 5 0.808 - - - - - - - 0.808 - - sucrase-isomaltase
69. GRID2 ENSGALG00000010397 6 0.808 - - - - - - - 0.808 - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
70. GAL9 GAL9 1 0.808 - - - - - - - 0.808 - -
71. LRRTM1 ENSGALG00000015967 85 0.808 - - - - - - - 0.808 - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
72. MLH1 ENSGALG00000039169 19 0.808 - - - - - - - 0.808 - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
73. ARHGAP39 ENSGALG00000001536 15 0.808 - - - - - - - 0.808 - - Rho GTPase activating protein 39, transcript variant X2
74. ENSGALG00000018875 ENSGALG00000018875 6 0.808 - - - - - - - 0.808 - -
75. UPK3A ENSGALG00000014227 7 0.808 - - - - - - - 0.808 - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
76. GPR183 ENSGALG00000016881 5 0.808 - - - - - - - 0.808 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
77. C11ORF61 C11ORF61 41 0.808 - - - - - - - 0.808 - -
78. SLC35A3 12 0.808 - - - - - - - 0.808 - - solute carrier family 35 member A3, transcript variant X7
79. F13B ENSGALG00000002369 1 0.808 - - - - - - - 0.808 - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
80. CELSR1 ENSGALG00000043355 19 0.808 - - - - - - - 0.808 - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
81. ENSGALG00000028428 ENSGALG00000028428 3 0.808 - - - - - - - 0.808 - -
82. PCDH12 ENSGALG00000002544 36 0.805 - - - - - - - 0.805 - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
83. SLC24A4 ENSGALG00000010793 238 0.8 - - - - - - - 0.800 - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
84. CDH4 ENSGALG00000005102 3446 0.797 - - - - - - - - - 0.797 cadherin 4 [Source:NCBI gene;Acc:419222]
85. FGF7 ENSGALG00000028158 189 0.797 - - - - - - - - - 0.797 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
86. TWIST1 ENSGALG00000041640 1176 0.784 - - - - - - - - - 0.784 twist family bHLH transcription factor 1 [Source:NCBI gene;Acc:395491]
87. COL23A1 ENSGALG00000006708 181 0.781 - - - - - - - - - 0.781 collagen type XXIII alpha 1 chain, transcript variant X1
88. LOC769486 ENSGALG00000029144 20 0.776 - - - - - - - 0.776 - - scale keratin-like, transcript variant X1
89. SERPINB14 SERPINB14 196 0.775 - - - - - - - - - 0.775
90. KIAA2022 43 0.771 - - - - - - - 0.771 - - KIAA2022, transcript variant X4
91. ENSGALG00000015321 ENSGALG00000015321 18 0.771 - - - - - - - 0.771 - -
92. MLC1 ENSGALG00000040038 206 0.771 - - - - - - - 0.771 - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
93. GAR1 ENSGALG00000020164 149 0.771 - - - - - - - 0.771 - - GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]
94. CELA2A ENSGALG00000004568 10 0.771 - - - - - - - 0.771 - - chymotrypsin like elastase family member 2A [Source:NCBI gene;Acc:419486]
95. SNORD103 SNORD103 25 0.771 - - - - - - - 0.771 - -
96. PTGDS ENSGALG00000030886 363 0.767 - - - - - - - 0.767 - - prostaglandin D2 synthase 21kDa (brain) [Source:NCBI gene;Acc:374110]
97. TBX22 ENSGALG00000004093 781 0.764 - - - - - - 0.764 - - - T-box 22 [Source:NCBI gene;Acc:373895]
98. MYOD1 ENSGALG00000006216 568 0.763 - - - - - - - - - 0.763 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
99. GPHB5 ENSGALG00000028839 45 0.76 - - - - - - 0.760 - - - glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
100. COL9A1 ENSGALG00000015970 3788 0.758 - - - - 0.758 - - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]

There are 67 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA