Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for FMR1

Gene Name Gene ID Reads Annotation
FMR1 ENSGALG00000009177 561 fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]











Genes with expression patterns similar to FMR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FMR1 ENSGALG00000009177 561 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
2. HMGXB3 ENSGALG00000005770 119 1.758 - - - - - - - 0.910 0.848 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
3. SKIL ENSGALG00000009356 335 1.736 - - - - - - - 0.898 0.838 - SKI like proto-oncogene [Source:NCBI gene;Acc:396087]
4. UBE3C ENSGALG00000006461 57 1.668 - - - - - - - 0.874 - 0.794 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
5. BTK ENSGALG00000004958 272 1.654 - - - - - - - 0.919 0.735 - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
6. GRPEL2 ENSGALG00000002673 105 1.613 - - - - - - - 0.838 - 0.775 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
7. ENSGALG00000018358 ENSGALG00000018358 101 1.594 - - - - - - 0.813 - - 0.781
8. TFG ENSGALG00000015299 849 1.57 - - - - - - - - 0.787 0.783 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
9. DTX2 ENSGALG00000001905 1475 1.568 - - - - - - - 0.774 - 0.794 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
10. TSPAN12 ENSGALG00000009029 2145 1.534 - - - - - - - - 0.750 0.784 tetraspanin 12 [Source:NCBI gene;Acc:417763]
11. AMDHD2 ENSGALG00000009234 1730 1.487 - - - - - - - - 0.786 0.701 Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
12. KIF1B ENSGALG00000002726 461 1.443 - - - - - - - 0.711 0.732 - kinesin family member 1B [Source:HGNC Symbol;Acc:HGNC:16636]
13. C3H20ORF94 C3H20ORF94 414 1.414 - - - - - - - - 0.702 0.712
14. CBX1 ENSGALG00000033926 2436 0.927 - - - - - - - - 0.927 - chromobox 1 [Source:NCBI gene;Acc:374237]
15. TK1 ENSGALG00000007191 277 0.925 - - - - - - - 0.925 - - thymidine kinase 1 [Source:NCBI gene;Acc:395719]
16. CASP7 ENSGALG00000008933 506 0.925 - - - - - - - - - 0.925 caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
17. NPPA ENSGALG00000004574 226 0.924 - - - - - - 0.924 - - - natriuretic peptide A [Source:NCBI gene;Acc:395765]
18. DNAJB14 ENSGALG00000014026 598 0.918 - - - - - - - - 0.918 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
19. SENP7 ENSGALG00000044642 48 0.916 - - - - - - - 0.916 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
20. SNRK ENSGALG00000039920 174 0.914 - - - - - - - - 0.914 - SNF related kinase [Source:NCBI gene;Acc:420675]
21. KIAA0232 ENSGALG00000015538 717 0.913 - - - - - - - - 0.913 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
22. FGF12 ENSGALG00000036971 2631 0.911 - - - - - - - - 0.911 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
23. SETX ENSGALG00000003661 701 0.903 - - - - - - - - 0.903 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
24. NIF3L1 ENSGALG00000008226 1500 0.902 - - - - - - - - 0.902 - NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
25. ENOX2 ENSGALG00000004079 4055 0.9 - - - - - - - - 0.900 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
26. RNF207 2949 0.894 - - - - - - - - 0.894 - ring finger protein 207, transcript variant X1
27. SFMBT2 ENSGALG00000009279 125 0.894 - - - - - - - - 0.894 - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
28. MKL1 3929 0.891 - - - - - - - 0.891 - - megakaryoblastic leukemia (translocation) 1, transcript variant X4
29. ATP11A ENSGALG00000041644 74 0.887 - - - - - - - 0.887 - - ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
30. RBM45 ENSGALG00000009202 6057 0.885 - - - - - - - - 0.885 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
31. NCOA2 ENSGALG00000036017 256 0.885 - - - - - - - - 0.885 - nuclear receptor coactivator 2, transcript variant X9
32. FAM161B ENSGALG00000010196 672 0.884 - - - - - - - - 0.884 - FAM161B, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:19854]
33. MFSD7 209 0.884 - - - - - - - 0.884 - - major facilitator superfamily domain containing 7, transcript variant X2
34. RBMS1 ENSGALG00000011132 569 0.882 - - - - - - - - 0.882 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
35. RIF1 ENSGALG00000012484 2248 0.881 - - - - - - - - 0.881 - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
36. IRF-4 IRF-4 19 0.877 - - - - - - - 0.877 - -
37. GSTCD ENSGALG00000010573 1409 0.876 - - - - - - - - 0.876 - glutathione S-transferase C-terminal domain containing [Source:HGNC Symbol;Acc:HGNC:25806]
38. ENSGALG00000018499 ENSGALG00000018499 100 0.875 - - - - - - - 0.875 - -
39. IFT27 ENSGALG00000042990 221 0.875 - - - - - - - - 0.875 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
40. KLF11 ENSGALG00000016440 65 0.874 - - - - - - - 0.874 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
41. gga-mir-6681 ENSGALG00000027840 546 0.874 - - - - - - - - - 0.874 gga-mir-6681 [Source:miRBase;Acc:MI0022502]
42. TAGAP ENSGALG00000013747 34 0.874 - - - - - - - 0.874 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
43. DHX58 ENSGALG00000023821 15 0.874 - - - - - - - 0.874 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
44. CPB1 ENSGALG00000006834 25 0.874 - - - - - - - 0.874 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
45. BPHL ENSGALG00000029659 501 0.873 - - - - - - - - 0.873 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
46. SRRD ENSGALG00000005614 234 0.873 - - - - - - - - 0.873 - SRR1 domain containing [Source:NCBI gene;Acc:416908]
47. CUL1 ENSGALG00000036941 317 0.872 - - - - - - - - 0.872 - cullin 1 [Source:HGNC Symbol;Acc:HGNC:2551]
48. OGDH ENSGALG00000014155 441 0.87 - - - - - - - - 0.870 - oxoglutarate dehydrogenase [Source:NCBI gene;Acc:426429]
49. ENSGALG00000021611 ENSGALG00000021611 1551 0.869 - - - - - - - - 0.869 -
50. ELN 765 0.869 - - - - - - - - 0.869 - elastin, transcript variant X24
51. gga-mir-454 ENSGALG00000033526 22 0.868 - - - - - - - 0.868 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
52. FILIP1L ENSGALG00000015271 644 0.868 - - - - - - - - 0.868 - filamin A interacting protein 1 like, transcript variant X8
53. UBXN2A ENSGALG00000016497 2444 0.868 - - - - - - - - 0.868 - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
54. ERO1LB ERO1LB 2910 0.867 - - - - - - - - 0.867 -
55. PPP2CA_1 ENSGALG00000006462 3170 0.865 - - - - - - - 0.865 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
56. G6PC2 ENSGALG00000010899 260 0.864 - - - - - - - - 0.864 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
57. ASL1 ENSGALG00000002558 78 0.863 - - - - - - - 0.863 - - argininosuccinate lyase 1 [Source:NCBI gene;Acc:396498]
58. NEIL1 ENSGALG00000001586 2292 0.863 - - - - - - - - 0.863 - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
59. GALNT14 ENSGALG00000009078 126 0.86 - - - - - - - - 0.860 - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
60. VPS51 ENSGALG00000004166 204 0.859 - - - - - - - - 0.859 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
61. FBXL2 ENSGALG00000030175 157 0.859 - - - - - - - - - 0.859 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]
62. ADAM9 ENSGALG00000003398 1299 0.858 - - - - - - - - 0.858 - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
63. DUSP22 ENSGALG00000027397 886 0.858 - - - - - - - - 0.858 - dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:HGNC:16077]
64. PIK3CB ENSGALG00000005505 338 0.858 - - - - - - - 0.858 - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta [Source:NCBI gene;Acc:424826]
65. MYO3A ENSGALG00000007647 643 0.857 - - - - - - - - 0.857 - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
66. CYP2J22 ENSGALG00000011394 76 0.857 - - - - - - - 0.857 - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
67. MT-ND4L MT-ND4L 12537 0.855 - - - - - - - - 0.855 -
68. ANO1 ENSGALG00000041808 5149 0.854 - - - - - - - - 0.854 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
69. AIDA ENSGALG00000009426 219 0.853 - - - - - - - - 0.853 - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
70. HDX ENSGALG00000007041 179 0.853 - - - - - - - - 0.853 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
71. ASH1L ENSGALG00000014638 803 0.852 - - - - - - - - 0.852 - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
72. CREG2 ENSGALG00000040947 1279 0.852 - - - - - - - - - 0.852 cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]
73. PVALB1 PVALB1 267 0.852 - - - - - - - 0.852 - -
74. PSTPIP2 ENSGALG00000040136 37 0.852 - - - - - - - 0.852 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
75. ENSGALG00000000882 ENSGALG00000000882 1208 0.851 - - - - - - - - - 0.851
76. PARM1 ENSGALG00000010268 13 0.85 - - - - - - - 0.850 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
77. SH3GL1 ENSGALG00000001121 159 0.849 - - - - - - - 0.849 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
78. VPS45 ENSGALG00000013899 154 0.849 - - - - - - - - 0.849 - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
79. PRDM4 ENSGALG00000012619 876 0.848 - - - - - - - - 0.848 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
80. HAGH ENSGALG00000005398 168 0.847 - - - - - - - 0.847 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
81. SLC35C1 ENSGALG00000008438 486 0.847 - - - - - - - 0.847 - - solute carrier family 35 member C1 [Source:NCBI gene;Acc:423203]
82. VIP ENSGALG00000013604 153 0.846 - - - - - - - 0.846 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
83. SFI1 104 0.844 - - - - - - - 0.844 - - SFI1 centrin binding protein, transcript variant X6
84. LACE1 LACE1 74 0.844 - - - - - - - - 0.844 -
85. HAND1 ENSGALG00000035104 2351 0.844 - - - - - - - - 0.844 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
86. VIPAS39 ENSGALG00000010459 2090 0.842 - - - - - - - - 0.842 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
87. ZDHHC20 ENSGALG00000017126 58 0.84 - - - - - - - 0.840 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
88. PCASP2 ENSGALG00000027961 42 0.839 - - - - - - - 0.839 - - paracaspase 2 [Source:NCBI gene;Acc:429451]
89. AGFG1 ENSGALG00000003052 4766 0.839 - - - - - - - - 0.839 - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
90. TGFB3 ENSGALG00000010346 3118 0.838 - - - - - - - - - 0.838 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
91. APP ENSGALG00000015770 9438 0.837 - - - - - - - - 0.837 - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
92. SLC6A2 ENSGALG00000003560 108 0.835 - - - - - - - 0.835 - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
93. AHSA2 1504 0.834 - - - - - - - - - 0.834 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
94. IARS ENSGALG00000004813 12936 0.834 - - - - - - - - 0.834 - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
95. FBXO22 ENSGALG00000039897 377 0.833 - - - - - - - 0.833 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
96. SLAMF8 ENSGALG00000027712 39 0.832 - - - - - - 0.832 - - - SLAM family member 8 [Source:NCBI gene;Acc:768588]
97. KIAA0408 ENSGALG00000030211 934 0.832 - - - - - - - - 0.832 - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
98. MGEA5 116 0.831 - - - - - - - 0.831 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X1
99. EP4 EP4 486 0.831 - - - - - - - 0.831 - -
100. ANKIB1 ENSGALG00000031917 109 0.831 - - - - - - - - 0.831 - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]

There are 439 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA