Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FGD3

Gene Name Gene ID Reads Annotation
FGD3 ENSGALG00000005237 4410 FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]











Genes with expression patterns similar to FGD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FGD3 ENSGALG00000005237 4410 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
2. THOC2 ENSGALG00000008507 9501 1.801 - - - - - - 0.899 0.902 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
3. ATN1 ENSGALG00000014554 3270 1.674 - - - - - - 0.928 0.746 - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
4. MRPL19 ENSGALG00000016731 22670 1.624 - - - - - - 0.831 0.793 - - mitochondrial ribosomal protein L19, transcript variant X1
5. ZMYM2 ENSGALG00000017139 3747 1.559 - - - - - 0.741 0.818 - - - zinc finger MYM-type containing 2, transcript variant X10
6. LTBP3 LTBP3 13316 1.473 - - - - - - 0.749 0.724 - -
7. ITCH ENSGALG00000040474 2646 0.986 - - - - - - - 0.986 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
8. MAP4K5 ENSGALG00000012321 3036 0.986 - - - - - - - 0.986 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
9. FNTA ENSGALG00000015397 3741 0.983 - - - - - - - 0.983 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
10. DLGAP4 ENSGALG00000001046 6872 0.983 - - - - - - - 0.983 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
11. VPS26A ENSGALG00000004174 9198 0.983 - - - - - - - 0.983 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
12. UBE2Q2 3861 0.983 - - - - - - - 0.983 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
13. TAF12 ENSGALG00000000991 8709 0.982 - - - - - - - 0.982 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
14. TBCE ENSGALG00000013950 3076 0.982 - - - - - - - 0.982 - - tubulin folding cofactor E
15. ENSGALG00000001591 ENSGALG00000001591 784 0.981 - - - - - - - 0.981 - -
16. KPNA4 ENSGALG00000009549 3674 0.981 - - - - - - - 0.981 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
17. ENSGALG00000005615 ENSGALG00000005615 4354 0.981 - - - - - - - 0.981 - -
18. HVCN1 ENSGALG00000004562 2550 0.981 - - - - - - - 0.981 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
19. SEMA3F ENSGALG00000029621 2079 0.98 - - - - - - - 0.980 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
20. LIPA ENSGALG00000006378 4414 0.98 - - - - - - - 0.980 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
21. GNE ENSGALG00000015331 1577 0.98 - - - - - - - 0.980 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
22. GNB1L ENSGALG00000001925 1981 0.98 - - - - - - - 0.980 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
23. EMC1 ENSGALG00000003969 6876 0.98 - - - - - - - 0.980 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
24. WDR82 ENSGALG00000025904 4783 0.98 - - - - - - - 0.980 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
25. CHST2 ENSGALG00000034507 6172 0.98 - - - - - - - 0.980 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
26. CAPRIN2 1473 0.979 - - - - - - - 0.979 - - caprin family member 2, transcript variant X7
27. RABL5 RABL5 5264 0.979 - - - - - - - 0.979 - -
28. HIP1R ENSGALG00000031511 1981 0.979 - - - - - - - 0.979 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
29. CABLES1 ENSGALG00000014998 1636 0.978 - - - - - - - 0.978 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
30. SETD2 ENSGALG00000042051 2981 0.978 - - - - - - - 0.978 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
31. SLX4 ENSGALG00000031841 1208 0.978 - - - - - - - 0.978 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
32. FTSJ2 FTSJ2 2951 0.978 - - - - - - - 0.978 - -
33. AKR1B10L3 ENSGALG00000019284 5869 0.978 - - - - - - - 0.978 - - aldo-keto reductase family 1 member B10-like 3
34. WNK2 ENSGALG00000038850 4712 0.978 - - - - - - - 0.978 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
35. RASGEF1B 2014 0.978 - - - - - - - 0.978 - - RasGEF domain family member 1B, transcript variant X8
36. C2CD2 ENSGALG00000016148 2734 0.978 - - - - - - - 0.978 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
37. POLDIP2 ENSGALG00000003211 11664 0.977 - - - - - - - 0.977 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
38. MRPL10 ENSGALG00000014387 12386 0.977 - - - - - - - 0.977 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
39. VASH1 ENSGALG00000043036 1235 0.977 - - - - - - - 0.977 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
40. AARSD1 ENSGALG00000002880 3068 0.977 - - - - - - - 0.977 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
41. C5orf63 C5orf63 3718 0.977 - - - - - - - 0.977 - -
42. FGD5 ENSGALG00000008546 4031 0.976 - - - - - - - 0.976 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
43. NR3C2 ENSGALG00000010035 603 0.976 - - - - - - - 0.976 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
44. UTP23 ENSGALG00000032400 3601 0.976 - - - - - - - 0.976 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
45. FPGT ENSGALG00000026958 788 0.975 - - - - - - - 0.975 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
46. C1orf21 ENSGALG00000020922 4035 0.975 - - - - - - - 0.975 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
47. SLC26A8 ENSGALG00000040498 253 0.975 - - - - - - - 0.975 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
48. TLN2 2295 0.975 - - - - - - - 0.975 - - talin 2, transcript variant X5
49. UBE2J2 ENSGALG00000001848 6527 0.975 - - - - - - - 0.975 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
50. YTHDF3 ENSGALG00000039774 170 0.974 - - - - - - - 0.974 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
51. TOR1B TOR1B 197 0.974 - - - - - - - 0.974 - -
52. NCS1 ENSGALG00000012710 1104 0.974 - - - - - - - 0.974 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
53. CAPN9 158 0.974 - - - - - - - 0.974 - - calpain 9
54. LOC420160 ENSGALG00000004252 188 0.974 - - - - - - - 0.974 - - cathepsin L1-like, transcript variant X3
55. CXorf23 1582 0.973 - - - - - - - 0.973 - - chromosome X open reading frame 23, transcript variant X3
56. SRPK2 ENSGALG00000008154 7385 0.973 - - - - - - - 0.973 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
57. EXOSC1 ENSGALG00000039917 5259 0.973 - - - - - - - 0.973 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
58. ALDH4A1 ENSGALG00000042184 9432 0.973 - - - - - - 0.973 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
59. NKX-6.2 NKX-6.2 1370 0.973 - - - - - - - 0.973 - -
60. PLA2G7 ENSGALG00000016713 2100 0.972 - - - - - - - 0.972 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
61. TARS ENSGALG00000003288 12702 0.971 - - - - - - - 0.971 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
62. CTSA ENSGALG00000006876 5380 0.971 - - - - - - - 0.971 - - cathepsin A [Source:NCBI gene;Acc:428163]
63. PAM16 9684 0.97 - - - - - - - 0.970 - - presequence translocase associated motor 16 homolog, transcript variant X2
64. HMOX1 ENSGALG00000012550 1186 0.97 - - - - - - - 0.970 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
65. METTL6 ENSGALG00000040665 4467 0.969 - - - - - - - 0.969 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
66. CCDC58 ENSGALG00000014413 9022 0.969 - - - - - - 0.969 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
67. WDR45B ENSGALG00000001563 5870 0.969 - - - - - - - 0.969 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
68. MRPL28 ENSGALG00000007473 19134 0.967 - - - - - - - 0.967 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
69. SRP9 ENSGALG00000026009 12418 0.962 - - - - - - - 0.962 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
70. TCEA2 ENSGALG00000005976 9143 0.962 - - - - - - - 0.962 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
71. NCOA4 ENSGALG00000002066 10544 0.961 - - - - - - 0.961 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
72. CPEB2 ENSGALG00000014516 1187 0.957 - - - - - - - 0.957 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
73. MFGE8 ENSGALG00000006702 6976 0.957 - - - - - - 0.957 - - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
74. CDC73 ENSGALG00000002469 4586 0.955 - - - - - - - 0.955 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
75. POLR2C ENSGALG00000001168 10703 0.955 - - - - - - - 0.955 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
76. C10orf11 C10orf11 3087 0.954 - - - - - - - 0.954 - -
77. LUC7L3 ENSGALG00000007386 11944 0.952 - - - - - - - 0.952 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
78. TYW3 ENSGALG00000032549 4869 0.95 - - - - - - - 0.950 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
79. MBNL2 ENSGALG00000016890 3162 0.949 - - - - - - - 0.949 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
80. ENSGALG00000020092 ENSGALG00000020092 3067 0.949 - - - - - - - 0.949 - -
81. TNRC6A ENSGALG00000006068 9166 0.948 - - - - - - - 0.948 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
82. PHF20L1 ENSGALG00000033205 7598 0.946 - - - - - - - 0.946 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
83. PSMG3 ENSGALG00000004203 11240 0.946 - - - - - - 0.946 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
84. XPA ENSGALG00000028998 8621 0.945 - - - - - - 0.945 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
85. ARPC4 ENSGALG00000006691 33311 0.943 - - - - - - 0.943 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
86. RAB20 ENSGALG00000016844 3250 0.943 - - - - - - 0.943 - - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
87. PCDH1 ENSGALG00000002553 2938 0.936 - - - - - - - 0.936 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
88. SREBF2 ENSGALG00000041687 4519 0.935 - - - - - - 0.935 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
89. NDUFB8 ENSGALG00000005704 5781 0.933 - - - - - - 0.933 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
90. MOB1B ENSGALG00000011573 567 0.932 - - - - - - 0.932 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
91. ARHGAP29 ENSGALG00000005683 3622 0.932 - - - - - - 0.932 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
92. CAMKK2 ENSGALG00000040131 2795 0.932 - - - - - - 0.932 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
93. SHQ1 ENSGALG00000007798 1982 0.931 - - - - - - 0.931 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
94. METTL11A METTL11A 11876 0.93 - - - - - - 0.930 - - -
95. UTP3 ENSGALG00000011553 8814 0.93 - - - - - - 0.930 - - - UTP3, small subunit processome component homolog (S. cerevisiae)
96. EIF4G3 ENSGALG00000010084 5881 0.93 - - - - - - 0.930 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
97. DNAJC15 ENSGALG00000016965 9163 0.93 - - - - - - 0.930 - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
98. AKAP7 ENSGALG00000029794 3287 0.93 - - - - - - 0.930 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
99. POPDC3 ENSGALG00000027420 700 0.929 - - - - - - 0.929 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
100. MAP1LC3A ENSGALG00000038721 2230 0.929 - - - - - - 0.929 - - - microtubule associated protein 1 light chain 3 alpha

There are 194 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA