Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FEN1

Gene Name Gene ID Reads Annotation
FEN1 ENSGALG00000033781 16551 flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]











Genes with expression patterns similar to FEN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FEN1 ENSGALG00000033781 16551 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
2. CPSF2 ENSGALG00000010783 5236 1.683 - - - - - - 0.860 0.823 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
3. PNRC2 ENSGALG00000004122 19228 1.598 - - - - - - 0.836 0.762 - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
4. TOP3B ENSGALG00000030051 5953 1.587 - - - - - - 0.775 0.812 - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
5. UFD1L 12964 1.551 - - - - - - 0.830 0.721 - - ubiquitin fusion degradation 1 like (yeast)
6. XPO1 ENSGALG00000029476 9526 1.529 - - - - - - 0.825 0.704 - - exportin 1 [Source:NCBI gene;Acc:421192]
7. MESDC1 1013 1.524 - - - - - - 0.730 0.794 - - mesoderm development candidate 1
8. MAD2L1 ENSGALG00000011967 16125 0.921 - - - - - - 0.921 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
9. YME1L1 ENSGALG00000007492 8652 0.914 - - - - - - 0.914 - - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
10. MARK3 ENSGALG00000011505 14846 0.91 - - - - - - 0.910 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
11. LONP1 ENSGALG00000040492 7133 0.901 - - - - - - 0.901 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
12. CDC73 ENSGALG00000002469 4586 0.892 - - - - - - 0.892 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
13. PPM1D ENSGALG00000035610 6530 0.89 - - - - - - 0.890 - - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
14. HAUS1 ENSGALG00000040397 6195 0.889 - - - - - - 0.889 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
15. EIF3I ENSGALG00000003337 28832 0.887 - - - - - - 0.887 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
16. GBAS 18453 0.887 - - - - - - 0.887 - - - glioblastoma amplified sequence
17. CANX ENSGALG00000032148 11297 0.884 - - - - - - 0.884 - - - calnexin [Source:NCBI gene;Acc:416288]
18. HNRNPLL ENSGALG00000008504 14719 0.883 - - - - - - 0.883 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
19. ORC4 ENSGALG00000012448 8405 0.882 - - - - - - 0.882 - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
20. LYAR ENSGALG00000015000 10756 0.881 - - - - - - 0.881 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
21. UBR4 ENSGALG00000030563 5225 0.88 - - - - - - 0.880 - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
22. IK ENSGALG00000037172 12100 0.879 - - - - - - 0.879 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
23. HDAC8 ENSGALG00000004825 12066 0.876 - - - - - - - 0.876 - - histone deacetylase 8, transcript variant X2
24. PSMA2 ENSGALG00000039387 23620 0.876 - - - - - - 0.876 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
25. PDS5A ENSGALG00000014286 13077 0.875 - - - - - - 0.875 - - - PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
26. RCAN3 ENSGALG00000004282 7778 0.871 - - - - - - 0.871 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
27. COPS2 ENSGALG00000000404 8980 0.868 - - - - - - 0.868 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
28. SRSF6 ENSGALG00000000990 12424 0.861 - - - - - - 0.861 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
29. DTYMK ENSGALG00000006305 11736 0.86 - - - - - - 0.860 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
30. ZC3H6 ENSGALG00000008269 10353 0.859 - - - - - - 0.859 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
31. SEC22B ENSGALG00000039704 16080 0.858 - - - - - - 0.858 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
32. BMI1 ENSGALG00000041267 6618 0.857 - - - - - - 0.857 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
33. CMSS1 ENSGALG00000015267 2954 0.855 - - - - - - 0.855 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
34. PARL ENSGALG00000002315 15943 0.854 - - - - - - 0.854 - - - presenilin associated rhomboid like
35. VPS29 ENSGALG00000004529 22509 0.853 - - - - - - 0.853 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
36. MTHFD1 ENSGALG00000011797 11001 0.853 - - - - - - 0.853 - - - methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
37. ENSGALG00000014375 ENSGALG00000014375 4741 0.853 - - - - - - 0.853 - - -
38. ANKMY2 ENSGALG00000010804 3061 0.853 - - - - - - 0.853 - - - ankyrin repeat and MYND domain containing 2 [Source:NCBI gene;Acc:420593]
39. CSTF3 ENSGALG00000011685 4711 0.852 - - - - - - 0.852 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
40. CCNK ENSGALG00000011138 6416 0.851 - - - - - - 0.851 - - - cyclin K [Source:NCBI gene;Acc:423446]
41. GGCT ENSGALG00000030552 3446 0.85 - - - - - - 0.850 - - - gamma-glutamylcyclotransferase
42. SRP72 ENSGALG00000011403 13666 0.85 - - - - - - 0.850 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
43. PSAP ENSGALG00000004769 14759 0.848 - - - - - - 0.848 - - - prosaposin [Source:NCBI gene;Acc:395602]
44. URM1 ENSGALG00000004971 17880 0.847 - - - - - - 0.847 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
45. HSF2 ENSGALG00000038420 5259 0.847 - - - - - - 0.847 - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
46. HELLS ENSGALG00000005451 7094 0.847 - - - - - - 0.847 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
47. TMEM39B ENSGALG00000003287 4125 0.846 - - - - - - 0.846 - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
48. CDR2L ENSGALG00000026295 4142 0.845 - - - - - - 0.845 - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
49. HSD17B4 ENSGALG00000002187 9581 0.845 - - - - - - - 0.845 - - hydroxysteroid 17-beta dehydrogenase 4 [Source:NCBI gene;Acc:395785]
50. DYNC1H1 ENSGALG00000011330 16400 0.842 - - - - - - 0.842 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
51. UPF3B ENSGALG00000008618 12350 0.841 - - - - - - 0.841 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
52. CCDC101 CCDC101 9111 0.839 - - - - - - 0.839 - - -
53. HTATSF1 ENSGALG00000006410 3526 0.839 - - - - - - 0.839 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
54. SYNGR2 ENSGALG00000027902 6953 0.838 - - - - - - 0.838 - - - Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
55. DIEXF ENSGALG00000009887 4782 0.838 - - - - - - 0.838 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
56. NECAP1 ENSGALG00000037656 5181 0.837 - - - - - - 0.837 - - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
57. ZFR ENSGALG00000003235 8466 0.837 - - - - - - 0.837 - - - zinc finger RNA binding protein, transcript variant X3
58. RNF185 ENSGALG00000006960 5428 0.836 - - - - - - 0.836 - - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
59. MPRIP ENSGALG00000004798 6700 0.836 - - - - - - 0.836 - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
60. IFT74 ENSGALG00000001801 1932 0.836 - - - - - - 0.836 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
61. NDRG3 ENSGALG00000001492 5919 0.836 - - - - - - 0.836 - - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
62. ZCCHC2 ENSGALG00000012889 3163 0.835 - - - - - - 0.835 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
63. CACYBP ENSGALG00000004554 7320 0.835 - - - - - - 0.835 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
64. OAT ENSGALG00000031158 10249 0.835 - - - - - - 0.835 - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
65. MTDH ENSGALG00000034050 9525 0.834 - - - - - - 0.834 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
66. ABHD17A ENSGALG00000041163 5578 0.834 - - - - - - 0.834 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
67. AIP ENSGALG00000040247 4166 0.834 - - - - - - 0.834 - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
68. UCH-L1 UCH-L1 12697 0.833 - - - - - - 0.833 - - -
69. NEK4 ENSGALG00000041428 4473 0.832 - - - - - - 0.832 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
70. LSM10 ENSGALG00000002127 2519 0.832 - - - - - - 0.832 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
71. PEX16 ENSGALG00000008421 3684 0.832 - - - - - - 0.832 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
72. SYS1 ENSGALG00000003929 4487 0.832 - - - - - - 0.832 - - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
73. RPLP0 ENSGALG00000023294 519985 0.831 - - - - - - 0.831 - - - ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
74. PARN ENSGALG00000003091 6363 0.83 - - - - - - 0.830 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
75. IPO9 ENSGALG00000000397 9263 0.83 - - - - - - 0.830 - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
76. PMPCB ENSGALG00000008280 6357 0.829 - - - - - - 0.829 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
77. MED16 ENSGALG00000001978 2387 0.829 - - - - - - 0.829 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
78. MTCH2 ENSGALG00000036196 15097 0.828 - - - - - - - 0.828 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
79. ZYX ENSGALG00000014688 8686 0.828 - - - - - - 0.828 - - - zyxin [Source:NCBI gene;Acc:418300]
80. LPAR1 ENSGALG00000015729 3874 0.828 - - - - - - 0.828 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
81. CRMP1B CRMP1B 18633 0.827 - - - - - - - 0.827 - -
82. WIPI1 ENSGALG00000004215 3359 0.827 - - - - - - 0.827 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
83. SQLE ENSGALG00000036915 4172 0.827 - - - - - - 0.827 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
84. DAB2 ENSGALG00000003803 6143 0.825 - - - - - - 0.825 - - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
85. CDC42SE2 ENSGALG00000027258 4725 0.824 - - - - - - 0.824 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
86. DPYSL3 ENSGALG00000007582 7743 0.824 - - - - - - 0.824 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
87. DNPEP ENSGALG00000011318 10623 0.824 - - - - - - 0.824 - - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
88. PWWP2A ENSGALG00000038202 3686 0.824 - - - - - - 0.824 - - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
89. RBM19 ENSGALG00000008289 10702 0.824 - - - - - - 0.824 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
90. TSPAN6 ENSGALG00000006808 20063 0.824 - - - - - - 0.824 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
91. E2F7 ENSGALG00000031340 3430 0.823 - - - - - - 0.823 - - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
92. PROS1 ENSGALG00000015409 3685 0.823 - - - - - - 0.823 - - - protein S [Source:HGNC Symbol;Acc:HGNC:9456]
93. SLC30A4 ENSGALG00000005703 5696 0.822 - - - - - - 0.822 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
94. FN3KRP ENSGALG00000028979 4160 0.822 - - - - - - 0.822 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
95. CHOCT-1 CHOCT-1 3422 0.822 - - - - - - 0.822 - - -
96. CYB5R3 ENSGALG00000014122 7664 0.821 - - - - - - 0.821 - - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
97. RIT1 ENSGALG00000014647 7174 0.821 - - - - - - 0.821 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
98. MFAP3 ENSGALG00000004040 6951 0.821 - - - - - - - 0.821 - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
99. COPS8 ENSGALG00000033385 10166 0.82 - - - - - - 0.820 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
100. SNRNP48 ENSGALG00000013005 1468 0.819 - - - - - - 0.819 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]

There are 368 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA