Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FDX1

Gene Name Gene ID Reads Annotation
FDX1 ENSGALG00000026507 2573 ferredoxin 1 [Source:NCBI gene;Acc:373947]











Genes with expression patterns similar to FDX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FDX1 ENSGALG00000026507 2573 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ferredoxin 1 [Source:NCBI gene;Acc:373947]
2. C28H19ORF10 C28H19ORF10 16529 1.582 - - - - - - - 0.848 0.734 -
3. GATA6 ENSGALG00000014976 3256 0.993 - - - - - - - 0.993 - - GATA binding protein 6 [Source:NCBI gene;Acc:396390]
4. TLE4 TLE4 7278 0.988 - - - - - - - 0.988 - -
5. FOXK2 ENSGALG00000001577 6346 0.968 - - - - - - - 0.968 - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
6. ACTR3 ENSGALG00000012159 16020 0.956 - - - - - - - 0.956 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
7. BASP1 ENSGALG00000012952 19549 0.953 - - - - - - - 0.953 - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
8. ASF1A ENSGALG00000014887 11319 0.952 - - - - - - - 0.952 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
9. TBCA ENSGALG00000004353 18510 0.943 - - - - - - - 0.943 - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
10. MAP9 ENSGALG00000020253 785 0.93 - - - - - - - 0.930 - - microtubule associated protein 9, transcript variant X7
11. CRADD ENSGALG00000011297 1653 0.929 - - - - - - - 0.929 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
12. C12orf45 C12orf45 2445 0.929 - - - - - - - 0.929 - -
13. PDE4B ENSGALG00000011094 1871 0.929 - - - - - - - 0.929 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
14. FAM69B ENSGALG00000002437 1253 0.929 - - - - - - - 0.929 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
15. ERICH1 ENSGALG00000031021 1495 0.929 - - - - - - - 0.929 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
16. ANKS1B ENSGALG00000011549 440 0.929 - - - - - - - 0.929 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
17. ADAMTSL1 1479 0.929 - - - - - - - 0.929 - - ADAMTS like 1, transcript variant X3
18. PIK3C2B ENSGALG00000037043 4522 0.929 - - - - - - - 0.929 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
19. ERAL1 ENSGALG00000003995 1114 0.929 - - - - - - - 0.929 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
20. XPOT ENSGALG00000009835 2953 0.928 - - - - - - - 0.928 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
21. GTF2H1 ENSGALG00000042340 1553 0.928 - - - - - - - 0.928 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
22. HEXA ENSGALG00000043828 4789 0.927 - - - - - - - 0.927 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
23. C20ORF7 C20ORF7 2383 0.927 - - - - - - - 0.927 - -
24. DUSP3 ENSGALG00000035369 1790 0.927 - - - - - - - 0.927 - - dual specificity phosphatase 3
25. PDIA3 ENSGALG00000008348 4982 0.927 - - - - - - - 0.927 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
26. NEK1 ENSGALG00000009683 4305 0.927 - - - - - - - 0.927 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
27. STXBP3 ENSGALG00000002001 1740 0.927 - - - - - - - 0.927 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
28. EFNB1 ENSGALG00000036539 2706 0.927 - - - - - - - 0.927 - - ephrin B1 [Source:NCBI gene;Acc:395896]
29. FPGS ENSGALG00000042460 1749 0.927 - - - - - - - 0.927 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
30. CHEK2 ENSGALG00000005695 1558 0.927 - - - - - - - 0.927 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
31. MED1 ENSGALG00000001708 9556 0.925 - - - - - - - 0.925 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
32. UQCC UQCC 5913 0.925 - - - - - - - 0.925 - -
33. ELP3 ENSGALG00000016624 4483 0.924 - - - - - - - 0.924 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
34. FABP3 ENSGALG00000037050 873 0.923 - - - - - - - 0.923 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
35. ATOX1 ENSGALG00000004176 16486 0.923 - - - - - - - 0.923 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
36. VPS39 ENSGALG00000008991 4018 0.922 - - - - - - - 0.922 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
37. ARPC5L ENSGALG00000001014 5642 0.922 - - - - - - - 0.922 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
38. ANKRD49 ENSGALG00000017210 3247 0.922 - - - - - - - 0.922 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
39. PDS5B ENSGALG00000017070 3998 0.922 - - - - - - - 0.922 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
40. FZD6 ENSGALG00000030626 3336 0.921 - - - - - - - 0.921 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
41. WDR92 ENSGALG00000008760 3934 0.921 - - - - - - - 0.921 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
42. IFT81 ENSGALG00000003854 2534 0.921 - - - - - - - 0.921 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
43. BCL2L1 ENSGALG00000006211 2490 0.92 - - - - - - - 0.920 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
44. DCTN6 ENSGALG00000010298 7507 0.918 - - - - - - - 0.918 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
45. SOX9 ENSGALG00000004386 14802 0.917 - - - - - - - 0.917 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
46. TBC1D1 ENSGALG00000039380 4423 0.914 - - - - - - - 0.914 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
47. PES1 ENSGALG00000007778 12248 0.913 - - - - - - - 0.913 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
48. EIF1AY ENSGALG00000016410 6431 0.913 - - - - - - - 0.913 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
49. CECR1 336 0.913 - - - - 0.913 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
50. C4orf46 ENSGALG00000009432 3255 0.912 - - - - - - - 0.912 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
51. CLIC3 ENSGALG00000038789 233 0.91 - - - - 0.910 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
52. SDHA ENSGALG00000013167 6509 0.91 - - - - - - - 0.910 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
53. PIGN ENSGALG00000012903 853 0.91 - - - - 0.910 - - - - - phosphatidylinositol glycan anchor biosynthesis class N [Source:HGNC Symbol;Acc:HGNC:8967]
54. ZEB1 ENSGALG00000007260 9277 0.91 - - - - - - - 0.910 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
55. EMC7 ENSGALG00000009637 4969 0.909 - - - - - - - 0.909 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
56. STON2 ENSGALG00000010579 76 0.909 - - - - 0.909 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
57. CABIN1 ENSGALG00000006363 4415 0.908 - - - - - - - 0.908 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
58. CCDC6 ENSGALG00000003165 93 0.906 - - - - 0.906 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
59. SPSB3 ENSGALG00000002285 1329 0.904 - - - - 0.904 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
60. PAQR8 ENSGALG00000016675 85 0.904 - - - - 0.904 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
61. SRSF4 1200 0.903 - - - - 0.903 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
62. FAM171B ENSGALG00000002646 837 0.903 - - - - 0.903 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
63. UBE2B ENSGALG00000032664 6069 0.902 - - - - - - - 0.902 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
64. ASTE1 ENSGALG00000036171 155 0.902 - - - - 0.902 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
65. AVL9 ENSGALG00000041568 1558 0.898 - - - - 0.898 - - - - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
66. TAB2 ENSGALG00000012356 3467 0.896 - - - - - - - 0.896 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
67. KCNC4 ENSGALG00000000400 129 0.896 - - - - 0.896 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
68. CSPP1 1756 0.895 - - - - 0.895 - - - - - centrosome and spindle pole associated protein 1
69. PPTC7 ENSGALG00000004550 154 0.893 - - - - 0.893 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
70. CMTM3 ENSGALG00000000424 393 0.893 - - - - 0.893 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
71. KIAA1407 KIAA1407 252 0.891 - - - - 0.891 - - - - -
72. SURF6 ENSGALG00000038413 11178 0.89 - - - - - - - 0.890 - - surfeit 6 [Source:NCBI gene;Acc:417160]
73. MOCS3 ENSGALG00000007986 308 0.888 - - - - 0.888 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
74. CMPK CMPK 9569 0.888 - - - - - - - 0.888 - -
75. CADM3 ENSGALG00000036925 1753 0.888 - - - - 0.888 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
76. CAMLG ENSGALG00000006411 662 0.886 - - - - 0.886 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
77. PDIA5 ENSGALG00000011689 6913 0.886 - - - - 0.886 - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
78. BBX ENSGALG00000015353 1281 0.884 - - - - 0.884 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
79. DUS2 856 0.884 - - - - 0.884 - - - - - dihydrouridine synthase 2, transcript variant X2
80. TAC1 ENSGALG00000009737 2211 0.884 - - - - 0.884 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
81. POLR2H ENSGALG00000008534 21521 0.884 - - - - - - - 0.884 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
82. SCAF4 ENSGALG00000033965 2027 0.882 - - - - 0.882 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
83. DEK ENSGALG00000012684 14179 0.882 - - - - - - - 0.882 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
84. LUC7L2 ENSGALG00000036238 11817 0.881 - - - - - - - 0.881 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
85. PPP2R5D ENSGALG00000040005 6804 0.881 - - - - - - - 0.881 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
86. DPP7 ENSGALG00000038145 4888 0.877 - - - - 0.877 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
87. RPA3 ENSGALG00000010700 6212 0.877 - - - - 0.877 - - - - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
88. POC1A ENSGALG00000034572 1572 0.875 - - - - - - - 0.875 - - POC1 centriolar protein A [Source:HGNC Symbol;Acc:HGNC:24488]
89. ARHGAP18 ENSGALG00000031843 2117 0.875 - - - - - - - 0.875 - - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
90. PCMTD2 ENSGALG00000005901 1833 0.874 - - - - - - - 0.874 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
91. DYNC1LI1 ENSGALG00000011491 11011 0.874 - - - - - - - 0.874 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
92. SUCLG1 ENSGALG00000015961 14323 0.873 - - - - - - - 0.873 - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
93. EHMT1 ENSGALG00000033678 5720 0.872 - - - - - - - 0.872 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
94. ENSGALG00000006865 ENSGALG00000006865 307 0.872 - - - - 0.872 - - - - -
95. GGA.10540 GGA.10540 3324 0.872 - - - - 0.872 - - - - -
96. GLT8D1 ENSGALG00000001642 4232 0.87 - - - - 0.870 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
97. GALNT16 ENSGALG00000009452 675 0.869 - - - - 0.869 - - - - - polypeptide N-acetylgalactosaminyltransferase 16 [Source:HGNC Symbol;Acc:HGNC:23233]
98. CCDC88A ENSGALG00000043587 2208 0.869 - - - - 0.869 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
99. ENSGALG00000022967 ENSGALG00000022967 240 0.869 - - - - 0.869 - - - - -
100. KCNB1 ENSGALG00000004758 620 0.868 - - - - 0.868 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]

There are 246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA