Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FDFT1

Gene Name Gene ID Reads Annotation
FDFT1 ENSGALG00000016665 3053 farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]











Genes with expression patterns similar to FDFT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FDFT1 ENSGALG00000016665 3053 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
2. RFFL ENSGALG00000002225 928 1.889 - - - - - - 0.961 - 0.928 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
3. RAD17 ENSGALG00000015571 1374 1.847 - - - - - - 0.909 - 0.938 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
4. GNMT ENSGALG00000043290 3288 1.772 - - - - - - 0.882 - 0.890 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
5. SLC25A48 ENSGALG00000006341 2606 1.719 - - - - - - 0.929 - 0.790 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
6. LONP2 ENSGALG00000003942 3380 1.717 - - - - - - 0.866 - 0.851 - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
7. BTBD7 4136 1.7 - - - - - - 0.966 0.734 - - BTB domain containing 7, transcript variant X2
8. TMEM38B ENSGALG00000027472 2465 1.614 - - - - - - 0.853 - 0.761 - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
9. PDP1 ENSGALG00000034876 2965 1.612 - - - - - - 0.847 - 0.765 - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]
10. CREB5 ENSGALG00000038265 92 1.608 - - - - - - - - 0.898 0.710 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
11. RUFY1 ENSGALG00000029706 4473 1.587 - - - - - - 0.827 - 0.760 - RUN and FYVE domain containing 1 [Source:NCBI gene;Acc:426519]
12. NNT ENSGALG00000014869 8496 1.58 - - - - - - 0.879 - 0.701 - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
13. GHITM ENSGALG00000021262 7159 1.554 - - - - - - 0.828 - 0.726 - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
14. YIPF4 ENSGALG00000010547 4337 1.544 - - - - - - 0.760 - 0.784 - Yip1 domain family member 4 [Source:NCBI gene;Acc:421464]
15. EXOSC8 ENSGALG00000017048 2939 1.538 - - - - - - 0.704 - 0.834 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
16. CLK3 ENSGALG00000001362 2171 0.984 - - - - - - 0.984 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
17. FAM120B ENSGALG00000011180 101 0.98 - - - - - - - - 0.980 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
18. FXYD6 ENSGALG00000025937 4073 0.978 - - - - - - 0.978 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
19. ALMS1 ENSGALG00000044620 570 0.977 - - - - - - - - 0.977 - ALMS1, centrosome and basal body associated protein, transcript variant X1
20. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.976 - - - - - - 0.976 - - - pseudouridylate synthase-like 1, transcript variant X8
21. C7orf63 C7orf63 147 0.975 - - - - - - 0.975 - - -
22. DTX2 ENSGALG00000001905 1475 0.974 - - - - - - 0.974 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
23. LPXN 133 0.973 - - - - - - 0.973 - - - leupaxin, transcript variant X4
24. ASTN2 ENSGALG00000007038 1748 0.973 - - - - - - 0.973 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
25. ARHGEF3 ENSGALG00000005481 683 0.972 - - - - - - 0.972 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
26. PCLO 249 0.972 - - - - - - - - 0.972 - piccolo presynaptic cytomatrix protein
27. TP53BP1 ENSGALG00000042201 708 0.972 - - - - - - 0.972 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
28. ANGPTL2 ENSGALG00000000927 2580 0.971 - - - - - - 0.971 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
29. PTDSS2 ENSGALG00000004300 682 0.971 - - - - - - 0.971 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
30. SRA1 ENSGALG00000040453 266 0.971 - - - - - - 0.971 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
31. KLF11 ENSGALG00000016440 65 0.97 - - - - - - 0.970 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
32. PIGF ENSGALG00000020057 201 0.97 - - - - - - 0.970 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
33. SLC28A3 ENSGALG00000012593 131 0.969 - - - - - - 0.969 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
34. C7orf55 C7orf55 7083 0.969 - - - - - - 0.969 - - -
35. BCAR3 358 0.969 - - - - - - 0.969 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
36. YWHAQ ENSGALG00000016433 3450 0.968 - - - - - - 0.968 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
37. TNFRSF11B ENSGALG00000043167 911 0.967 - - - - - - 0.967 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
38. C11H19ORF12 C11H19ORF12 5149 0.967 - - - - - - 0.967 - - -
39. ESCO1 ENSGALG00000014936 739 0.966 - - - - - - 0.966 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
40. BBS4 ENSGALG00000001798 667 0.966 - - - - - - 0.966 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
41. CARS2 ENSGALG00000016847 3814 0.966 - - - - - - - - 0.966 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
42. PRDM15 ENSGALG00000019178 2729 0.966 - - - - - - - - 0.966 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
43. MYH15 ENSGALG00000015358 6304 0.964 - - - - - - 0.964 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
44. LHCGR ENSGALG00000009095 174 0.963 - - - - - - - - 0.963 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
45. PIGL ENSGALG00000004492 669 0.962 - - - - - - 0.962 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
46. LRR1 ENSGALG00000012230 1062 0.962 - - - - - - 0.962 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
47. IWS1 ENSGALG00000001803 2305 0.962 - - - - - - 0.962 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
48. TTI1 ENSGALG00000006791 1218 0.961 - - - - - - 0.961 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
49. TUFT1 ENSGALG00000032955 1317 0.961 - - - - - - 0.961 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
50. KLHL15 ENSGALG00000016345 1638 0.961 - - - - - - - - 0.961 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
51. ODZ2 ODZ2 1380 0.96 - - - - - - - - 0.960 -
52. KIAA1217 ENSGALG00000007766 144 0.959 - - - - - - - - 0.959 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
53. WHSC1 1712 0.959 - - - - - - 0.959 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
54. PRDM10 632 0.958 - - - - - - 0.958 - - - PR domain 10, transcript variant X10
55. NRXN1 ENSGALG00000009107 277 0.957 - - - - - - - - 0.957 - neurexin 1 [Source:NCBI gene;Acc:395398]
56. MRM1 ENSGALG00000039523 2009 0.957 - - - - - - 0.957 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
57. CLASP1 ENSGALG00000011645 1378 0.956 - - - - - - 0.956 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
58. THOC3 ENSGALG00000024172 7617 0.955 - - - - - - 0.955 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
59. ACTR10 ENSGALG00000012041 2752 0.954 - - - - - - 0.954 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
60. ZNF830 ENSGALG00000013156 3896 0.954 - - - - - - 0.954 - - - zinc finger protein 830
61. HYAL1 ENSGALG00000000785 1778 0.953 - - - - - - 0.953 - - - hyaluronoglucosaminidase 1, transcript variant X3
62. ENSGALG00000026919 ENSGALG00000026919 301 0.953 - - - - - - - - 0.953 -
63. ABCC8 ENSGALG00000006172 41 0.952 - - - - - - - - 0.952 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
64. FASTKD3 ENSGALG00000033521 1186 0.951 - - - - - - - - 0.951 - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
65. CUX2 ENSGALG00000004598 231 0.951 - - - - - - - - 0.951 - cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
66. C9orf85 ENSGALG00000026001 4110 0.951 - - - - - - 0.951 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
67. SMAP2 ENSGALG00000029244 498 0.95 - - - - - - - - 0.950 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
68. EML1 1941 0.95 - - - - - - 0.950 - - - echinoderm microtubule associated protein like 1, transcript variant X11
69. LMX1A ENSGALG00000003424 335 0.949 - - - - - - 0.949 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
70. AP1S3 ENSGALG00000005171 2981 0.948 - - - - - - 0.948 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
71. AP1AR ENSGALG00000028807 2398 0.947 - - - - - - 0.947 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
72. PYCR1 ENSGALG00000007300 7987 0.946 - - - - - - 0.946 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
73. OSBPL1A ENSGALG00000015086 2702 0.945 - - - - - - 0.945 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
74. NRCAM ENSGALG00000009514 490 0.945 - - - - - - 0.945 - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
75. DTX3L ENSGALG00000012075 399 0.945 - - - - - - - - 0.945 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
76. NTL ENSGALG00000005156 278 0.945 - - - - - - - - 0.945 - neurotrypsin-like, transcript variant X7
77. GADD45 GADD45 8780 0.944 - - - - - - 0.944 - - -
78. LMO4 ENSGALG00000006252 3686 0.943 - - - - - - 0.943 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
79. C12orf66 ENSGALG00000027682 2110 0.943 - - - - - - 0.943 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
80. SUMF1 ENSGALG00000008286 941 0.942 - - - - - - 0.942 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
81. MDN1 ENSGALG00000015733 2352 0.941 - - - - - - - - 0.941 - midasin AAA ATPase 1, transcript variant X1
82. FAM86A FAM86A 1860 0.941 - - - - - - 0.941 - - -
83. AACS ENSGALG00000002899 960 0.941 - - - - - - - - 0.941 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
84. DDX42 ENSGALG00000000581 8780 0.941 - - - - - - 0.941 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
85. MSANTD4 ENSGALG00000017177 3306 0.941 - - - - - - - - 0.941 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
86. EFNB1 ENSGALG00000036539 2706 0.94 - - - - - - 0.940 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
87. FLRT3 ENSGALG00000008716 593 0.94 - - - - - - - - 0.940 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
88. SPATA5L1 ENSGALG00000005682 240 0.94 - - - - - - - - 0.940 - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
89. FREM3 ENSGALG00000020561 1824 0.939 - - - - - - 0.939 - - - FRAS1 related extracellular matrix 3
90. CEP112 ENSGALG00000034989 123 0.939 - - - - - - - - 0.939 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
91. CAPN1 ENSGALG00000041685 4011 0.939 - - - - - - 0.939 - - - calpain 1 [Source:NCBI gene;Acc:693249]
92. TAF1B ENSGALG00000016437 2318 0.939 - - - - - - 0.939 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
93. OSBPL8 ENSGALG00000010246 4565 0.938 - - - - - - 0.938 - - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
94. MITF ENSGALG00000039583 865 0.938 - - - - - - 0.938 - - - melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
95. COL17A1 ENSGALG00000029617 167 0.938 - - - - - - 0.938 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
96. TOM1L2 ENSGALG00000004902 89 0.937 - - - - - - - - 0.937 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
97. PDXDC1 ENSGALG00000034829 406 0.936 - - - - - - - - 0.936 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
98. NUDCD1 ENSGALG00000040879 2965 0.936 - - - - - - 0.936 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
99. NAPEPLD ENSGALG00000008285 1295 0.936 - - - - - - 0.936 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
100. TMEM74 ENSGALG00000041553 398 0.936 - - - - - - - - 0.936 - transmembrane protein 74 [Source:HGNC Symbol;Acc:HGNC:26409]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA