Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for FDFT1

Gene Name Gene ID Reads Annotation
FDFT1 ENSDARG00000101062 6 farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]










Genes with expression patterns similar to FDFT1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. FDFT1 ENSDARG00000101062 6 3 - 1.000 - 1.000 - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
2. PKP3 PKP3 391 1.791 - 0.933 - 0.858 - - - - -
3. wdr65 wdr65 251 1.781 - 0.781 - - - 1.000 - - -
4. hbaa1 ENSDARG00000097011 58 1.754 - 0.890 - - - 0.864 - - - hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
5. nptnb ENSDARG00000043864 165 1.752 - 0.939 - - - 0.813 - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
6. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1.751 - 0.751 - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
7. si:dkey-253d23.9 ENSDARG00000074820 24 1.744 - 0.744 - - - 1.000 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
8. MYO9B ENSDARG00000078313 97 1.711 - 0.711 - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
9. zgc:175008 zgc:175008 55 1.707 - 0.984 - 0.723 - - - - -
10. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.692 - 0.984 - - - 0.708 - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
11. THAP6 THAP6 57 1.656 - 0.948 - - - 0.708 - - -
12. tmem229b ENSDARG00000060569 516 1.638 - 0.809 - - - 0.829 - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
13. usp49 ENSDARG00000000229 706 1.597 - 0.759 - - - 0.838 - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
14. zgc:113295 ENSDARG00000074768, ENSDARG00000103947 36 1.519 - 0.809 - 0.710 - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
15. csnk1g1 ENSDARG00000104342 57 1.464 - 0.742 - - - 0.722 - - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
16. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
17. CABZ01087111.1 CABZ01087111.1 42 1 - - - - - 1.000 - - -
18. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
19. mctp1b ENSDARG00000060871 20 1 - - - - - 1.000 - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
20. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
21. si:ch211-108c6.2 14 1 - - - - - 1.000 - - - si:ch211-108c6.2
22. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
23. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
24. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
25. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
26. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
27. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
28. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
29. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
30. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
31. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
32. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
33. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
34. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
35. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
36. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
37. CU638740.4 CU638740.4 1 1 - - - - - 1.000 - - -
38. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
39. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
40. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
41. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
42. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - - 1.000 - - -
43. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
44. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
45. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
46. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
47. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
48. htr1aa ENSDARG00000093745 0 1 - - - - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-071203-1]
49. si:ch211-71k24.5 si:ch211-71k24.5 9 1 - - - - - 1.000 - - -
50. polg ENSDARG00000060951 33 1 - - - - - 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
51. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
52. si:ch1073-219n12.1 71 1 - - - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
53. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - 1.000 - - -
54. asip asip 2 1 - - - - - 1.000 - - -
55. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
56. CR356223.4 CR356223.4 42 1 - - - - - 1.000 - - -
57. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
58. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
59. zgc:136678 zgc:136678 2 1 - - - - - 1.000 - - -
60. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
61. BX927122.3 BX927122.3 19 1 - - - - - 1.000 - - -
62. CU570981.1 CU570981.1 9 1 - - - 1.000 - - - - -
63. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
64. nr4a2a ENSDARG00000017007 140 1 - - - - - 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
65. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
66. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
67. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
68. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
69. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
70. TMEM136 TMEM136 13 1 - - - - - 1.000 - - -
71. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1 - - - - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
72. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
73. GPR22_1 GPR22_1 28 1 - - - 1.000 - - - - -
74. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
75. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
76. CABZ01023423.1 CABZ01023423.1 8 1 - - - - - 1.000 - - -
77. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
78. PCDH10 PCDH10 7 1 - - - - - 1.000 - - -
79. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
80. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
81. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
82. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
83. CCSER1 ENSDARG00000075919 16 1 - - - - - 1.000 - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
84. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
85. zgc:92161 ENSDARG00000101749 27 1 - - - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
86. hs6st3b ENSDARG00000069500 5 1 - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
87. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - 1.000 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
88. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - 1.000 - - - - - - -
89. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
90. CU633848.1 CU633848.1 4 1 - - - - - 1.000 - - -
91. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 1 - - - - - 1.000 - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
92. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
93. CABZ01053617.1 CABZ01053617.1 5 1 - - - - - 1.000 - - -
94. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
95. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - - - 1.000 - - -
96. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - 1.000 - - - si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
97. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
98. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
99. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
100. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]

There are 877 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA