Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FCF1

Gene Name Gene ID Reads Annotation
FCF1 ENSGALG00000010275 24928 FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]











Genes with expression patterns similar to FCF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FCF1 ENSGALG00000010275 24928 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
2. CRNKL1 ENSGALG00000008429 7280 1.556 - - - - - - 0.794 0.762 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
3. NVL ENSGALG00000009322 5286 1.555 - - - - - - 0.788 0.767 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
4. RBM7 ENSGALG00000007017 8779 1.538 - - - - - - 0.782 0.756 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
5. KDM5B ENSGALG00000038948 50645 1.524 - - - - - 0.725 0.799 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
6. XRCC5 ENSGALG00000011492 6802 1.519 - - - - - - 0.755 0.764 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
7. TPD52 ENSGALG00000040167 9891 1.505 - - - - - - 0.721 0.784 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
8. TMEM192 ENSGALG00000009528 2428 1.502 - - - - - - 0.735 0.767 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
9. RCOR3 ENSGALG00000009871 7022 1.5 - - - - - - 0.737 0.763 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
10. EXO1 ENSGALG00000010748 7572 1.493 - - - - - - 0.741 0.752 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
11. C6ORF192 C6ORF192 4224 1.486 - - - - - - 0.719 0.767 - -
12. TMEM126A ENSGALG00000014066 6149 1.473 - - - - - - 0.708 0.765 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
13. KIAA0196 KIAA0196 4011 1.44 - - - - - - 0.701 0.739 - -
14. ABHD17A ENSGALG00000041163 5578 0.955 - - - - - - - 0.955 - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
15. BIRC6 ENSGALG00000010541 7999 0.91 - - - - - - 0.910 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
16. RABGGTB ENSGALG00000011388 11654 0.906 - - - - - - 0.906 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
17. PARP1 ENSGALG00000009228 39433 0.898 - - - - - - 0.898 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
18. ZNF593 ENSGALG00000000542 79105 0.896 - - - - - - 0.896 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
19. YWHAZ ENSGALG00000031387 84985 0.892 - - - - - - 0.892 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
20. NDUFA12 ENSGALG00000011325 19807 0.891 - - - - - - 0.891 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
21. SKAP2 ENSGALG00000030081 13746 0.89 - - - - - - 0.890 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
22. ESF1 ENSGALG00000034768 8610 0.889 - - - - - - 0.889 - - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
23. GOLGA7 ENSGALG00000003483 26525 0.887 - - - - - - 0.887 - - - golgin A7 [Source:NCBI gene;Acc:426787]
24. EIF4A2 ENSGALG00000008684 58507 0.883 - - - - - - 0.883 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
25. HSPA4 ENSGALG00000040882 20966 0.883 - - - - - - 0.883 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
26. HDDC2 ENSGALG00000014841 7674 0.881 - - - - - - 0.881 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
27. GLRX3 ENSGALG00000010464 22578 0.881 - - - - - - 0.881 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
28. LSM5 ENSGALG00000041625 22307 0.88 - - - - - - 0.880 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
29. ENSGALG00000017396 ENSGALG00000017396 9028 0.879 - - - - - - 0.879 - - -
30. BSG ENSGALG00000001328 37947 0.877 - - - - - - 0.877 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
31. MRPL20 ENSGALG00000001542 28764 0.877 - - - - - - 0.877 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
32. GLO1 ENSGALG00000010127 31662 0.874 - - - - - - 0.874 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
33. LLPH ENSGALG00000019358 20976 0.874 - - - - - - 0.874 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
34. RANBP1 ENSGALG00000002107 17715 0.872 - - - - - - 0.872 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
35. AIMP2 ENSGALG00000003400 12655 0.872 - - - - - - 0.872 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
36. TXNDC17 ENSGALG00000027950 45004 0.871 - - - - - - 0.871 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
37. RIOK2 ENSGALG00000015288 6280 0.871 - - - - - - 0.871 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
38. TMEM167A ENSGALG00000027332 13862 0.871 - - - - - - 0.871 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
39. SIVA1 ENSGALG00000011619 15130 0.869 - - - - - - 0.869 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
40. RSL1D1 ENSGALG00000033690 13638 0.868 - - - - - - 0.868 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
41. ATG3 ENSGALG00000015204 11277 0.868 - - - - - - 0.868 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
42. TPRKB ENSGALG00000013018 8687 0.867 - - - - - - 0.867 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
43. LTN1 ENSGALG00000015804 3784 0.866 - - - - - - 0.866 - - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
44. NASP ENSGALG00000010255 28423 0.865 - - - - - - 0.865 - - - nuclear autoantigenic sperm protein, transcript variant X3
45. MRPL2 ENSGALG00000008597 16500 0.864 - - - - - - 0.864 - - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
46. APIP ENSGALG00000031286 6838 0.863 - - - - - - 0.863 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
47. DGCR2 ENSGALG00000005891 8405 0.863 - - - - - - 0.863 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
48. LIMD2 ENSGALG00000000529 30617 0.863 - - - - - - 0.863 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
49. R3HDM1 ENSGALG00000012246 6580 0.863 - - - - - - 0.863 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
50. SMC4 ENSGALG00000009553 15715 0.862 - - - - - - 0.862 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
51. C1H12ORF23 C1H12ORF23 13234 0.861 - - - - - - 0.861 - - -
52. RPF2 ENSGALG00000037087 12788 0.86 - - - - - - 0.860 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
53. CLNS1A ENSGALG00000008574 25675 0.86 - - - - - - 0.860 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
54. KLHDC4 ENSGALG00000037315 9828 0.859 - - - - - - 0.859 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
55. C4H4ORF52 C4H4ORF52 8116 0.859 - - - - - - 0.859 - - -
56. NDUFV2 ENSGALG00000036625 29234 0.858 - - - - - - 0.858 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
57. TERF2 ENSGALG00000000657 7865 0.857 - - - - - - 0.857 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
58. NUP50 ENSGALG00000014222 11743 0.856 - - - - - - 0.856 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
59. EBNA1BP2 ENSGALG00000009045 17453 0.856 - - - - - - 0.856 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
60. EGLN1 ENSGALG00000041422 11032 0.855 - - - - - - 0.855 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
61. CMPK CMPK 9569 0.852 - - - - - - 0.852 - - -
62. GLRX5 ENSGALG00000011079 28943 0.852 - - - - - - - 0.852 - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
63. CASK ENSGALG00000042400 8485 0.852 - - - - - - 0.852 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
64. SNRNP40 ENSGALG00000000615 32298 0.852 - - - - - - 0.852 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
65. DERL1 ENSGALG00000033950 15074 0.851 - - - - - - 0.851 - - - derlin 1 [Source:NCBI gene;Acc:420350]
66. PREP ENSGALG00000015405 17050 0.851 - - - - - - 0.851 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
67. UTP11L UTP11L 11927 0.848 - - - - - - 0.848 - - -
68. PSMB2 ENSGALG00000026421 51885 0.847 - - - - - - 0.847 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
69. FNBP1L ENSGALG00000005850 9219 0.847 - - - - - - 0.847 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
70. MADH2 MADH2 13017 0.847 - - - - - - 0.847 - - -
71. WDR43 ENSGALG00000032529 12235 0.845 - - - - - - 0.845 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
72. CSE1L ENSGALG00000004707 20653 0.845 - - - - - - 0.845 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
73. KIAA0020 KIAA0020 14353 0.845 - - - - - - 0.845 - - -
74. DCAF7 ENSGALG00000000510 8681 0.845 - - - - - - 0.845 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
75. PTGFRN ENSGALG00000015464 14584 0.843 - - - - - - 0.843 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
76. IREB2 ENSGALG00000035462 10659 0.843 - - - - - - 0.843 - - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
77. TMEM30A ENSGALG00000015904 8533 0.842 - - - - - - 0.842 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
78. TMED7 ENSGALG00000028484 21008 0.841 - - - - - - 0.841 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
79. GPC4 ENSGALG00000006080 56498 0.841 - - - - - - 0.841 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
80. UBE2V1 ENSGALG00000008015 17947 0.841 - - - - - - 0.841 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
81. OSTC ENSGALG00000010526 19422 0.84 - - - - - - 0.840 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
82. PMPCA ENSGALG00000001950 6766 0.84 - - - - - - 0.840 - - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
83. CASP3 ENSGALG00000010638 11572 0.84 - - - - - - 0.840 - - - caspase 3 [Source:NCBI gene;Acc:395476]
84. TMEM184C ENSGALG00000010019 7856 0.839 - - - - - - 0.839 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
85. ANAPC1 ENSGALG00000008254 2519 0.839 - - - - - - 0.839 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
86. ERBB2IP ERBB2IP 5800 0.839 - - - - - - 0.839 - - -
87. MED17 ENSGALG00000017218 5821 0.839 - - - - - - 0.839 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
88. FARSB ENSGALG00000005236 10738 0.838 - - - - - - 0.838 - - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
89. C17H9ORF16 C17H9ORF16 7908 0.838 - - - - - - 0.838 - - -
90. CRLS1 ENSGALG00000009214 8652 0.836 - - - - - - 0.836 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
91. RBMX ENSGALG00000006457 34009 0.836 - - - - - - 0.836 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
92. TAF3 ENSGALG00000006731 15569 0.836 - - - - - - 0.836 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
93. FAM98A ENSGALG00000010428 9585 0.836 - - - - - - 0.836 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
94. RUVBL1 ENSGALG00000005931 9379 0.836 - - - - - - 0.836 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
95. RPS3A ENSGALG00000010077 292185 0.835 - - - - - - 0.835 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
96. TTC37 ENSGALG00000014670 5715 0.835 - - - - - - 0.835 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
97. CWC27 ENSGALG00000014747 8389 0.835 - - - - - - 0.835 - - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
98. ASUN ASUN 17129 0.834 - - - - - - 0.834 - - -
99. SCCPDH ENSGALG00000010641 8624 0.834 - - - - - - 0.834 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
100. STRN ENSGALG00000010580 7561 0.834 - - - - - - 0.834 - - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]

There are 834 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA