Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FBN3

Gene Name Gene ID Reads Annotation
FBN3 ENSGALG00000037625 23313 fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]











Genes with expression patterns similar to FBN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FBN3 ENSGALG00000037625 23313 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
2. MBNL2 ENSGALG00000016890 3162 1.479 - - 0.768 - - - - 0.711 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
3. ARF4 ENSGALG00000005622 50567 1.443 - - - - 0.704 - 0.739 - - - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
4. EIF3J ENSGALG00000008187 43570 0.995 - - - - - - 0.995 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
5. MOB3A ENSGALG00000031729 9690 0.993 - - - - - - 0.993 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
6. ENSGALG00000004773 ENSGALG00000004773 10418 0.993 - - - - - - 0.993 - - -
7. IMP4 ENSGALG00000029152 11669 0.992 - - - - - - 0.992 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
8. POLR2D ENSGALG00000002057 14548 0.992 - - - - - - 0.992 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
9. ATP5MC1 ENSGALG00000001330 37766 0.991 - - - - - - 0.991 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
10. PFDN4 ENSGALG00000007792 26514 0.991 - - - - - - 0.991 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
11. POLR1C ENSGALG00000010349 7059 0.99 - - - - - - 0.990 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
12. FAM103A1 17380 0.99 - - - - - - 0.990 - - - family with sequence similarity 103 member A1, transcript variant X2
13. EGFLAM ENSGALG00000003726 4588 0.989 - - - - - - 0.989 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
14. CTU2 4818 0.989 - - - - - - 0.989 - - - cytosolic thiouridylase subunit 2, transcript variant X3
15. M6PR ENSGALG00000031681 9442 0.989 - - - - - - 0.989 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
16. HOXD8 ENSGALG00000037272 4338 0.989 - - - - - - 0.989 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
17. PRDX6 ENSGALG00000003053 17928 0.988 - - - - - - 0.988 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
18. MRPL32 ENSGALG00000037258 6861 0.988 - - - - - - 0.988 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
19. DENR ENSGALG00000003795 30805 0.988 - - - - - - 0.988 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
20. SMC2 ENSGALG00000015691 34013 0.988 - - - - - - 0.988 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
21. CAND1 4541 0.988 - - - - - - 0.988 - - - cullin associated and neddylation dissociated 1
22. BMP3 ENSGALG00000035052 3260 0.987 - - - - - - 0.987 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
23. ABCC10 2213 0.987 - - - - - - 0.987 - - - ATP binding cassette subfamily C member 10, transcript variant X10
24. TMEM97 ENSGALG00000005702 2037 0.987 - - - - - - 0.987 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
25. ENSGALG00000014190 ENSGALG00000014190 5735 0.987 - - - - - - 0.987 - - -
26. TMEM120B ENSGALG00000004254 2819 0.987 - - - - - - 0.987 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
27. PTBP2 ENSGALG00000005552 3443 0.987 - - - - - - 0.987 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
28. TMEM62 ENSGALG00000009260 1170 0.986 - - - - - - 0.986 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
29. TMC1 ENSGALG00000015145 1180 0.986 - - - - - - 0.986 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
30. DYNLL2 ENSGALG00000005522 17107 0.985 - - - - - - 0.985 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
31. DDX21 ENSGALG00000004144 13105 0.982 - - - - - - 0.982 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
32. MCM2 ENSGALG00000006037 13458 0.982 - - - - - - 0.982 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
33. PHGDH ENSGALG00000002988 6912 0.982 - - - - - - 0.982 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
34. ITGA1 ENSGALG00000014891 11378 0.981 - - - - - - 0.981 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
35. CHNTHL1 CHNTHL1 4976 0.975 - - - - - - 0.975 - - -
36. CALM_1 CALM_1 57812 0.952 - - - - - - 0.952 - - -
37. ALDH1A2 ENSGALG00000004270 49483 0.941 - - - - - - 0.941 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
38. UQCRFS1 ENSGALG00000025819 66637 0.92 - - - - - - 0.920 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
39. ATP2A2 ENSGALG00000032287 12734 0.91 - - - - - - 0.910 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
40. SERBP1 ENSGALG00000011229 30489 0.854 - - - - - - - 0.854 - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
41. PXDN ENSGALG00000016377 4255 0.852 - - - - - - - 0.852 - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
42. C5H14ORF166 C5H14ORF166 24176 0.847 - - - - - - - 0.847 - -
43. ENSGALG00000007574 ENSGALG00000007574 7695 0.836 - - - - - - - 0.836 - -
44. KMT2C 6306 0.833 - - - - - - - 0.833 - - lysine methyltransferase 2C, transcript variant X14
45. PARVB ENSGALG00000014201 27559 0.832 - - - - - - 0.832 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
46. RND3 ENSGALG00000026313 9271 0.82 - - - - - - - 0.820 - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
47. gga-mir-1610 ENSGALG00000025580 3985 0.815 - - - - - - - 0.815 - - gga-mir-1610 [Source:miRBase;Acc:MI0007338]
48. PPFIBP1 ENSGALG00000014106 9864 0.815 - - - - - - - 0.815 - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
49. MTO1 ENSGALG00000015923 4418 0.813 - - - - - - - 0.813 - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
50. OCC-1 OCC-1 1887 0.809 - - - - - - - 0.809 - -
51. CHERP ENSGALG00000003824 11489 0.805 - - - - - - 0.805 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
52. POLR2E ENSGALG00000002591 26405 0.804 - - - - - - 0.804 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
53. HES1 ENSGALG00000028015 6818 0.79 - - - - - - - 0.790 - - hes family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5192]
54. ST13 ENSGALG00000012007 25670 0.767 - - - - - - - 0.767 - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
55. MGST3 ENSGALG00000003445 50408 0.762 - - - - - - 0.762 - - - microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
56. RALBP1 ENSGALG00000008405 13780 0.762 - - - - - - - 0.762 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
57. AHSA1 ENSGALG00000010463 15252 0.76 - - - - - - - 0.760 - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
58. CWF19L2 ENSGALG00000017171 4590 0.757 - - - - - - - 0.757 - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
59. LZIC ENSGALG00000002616 9052 0.754 - - - - - - 0.754 - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
60. METTL6 ENSGALG00000040665 4467 0.751 - - - - - - - 0.751 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
61. CTSA ENSGALG00000006876 5380 0.748 - - - - - - - 0.748 - - cathepsin A [Source:NCBI gene;Acc:428163]
62. SRPK2 ENSGALG00000008154 7385 0.747 - - - - - - - 0.747 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
63. AKR1B10L3 ENSGALG00000019284 5869 0.743 - - - - - - - 0.743 - - aldo-keto reductase family 1 member B10-like 3
64. COL5A2 ENSGALG00000031112 18358 0.742 - - - - 0.742 - - - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
65. TCEA2 ENSGALG00000005976 9143 0.74 - - - - - - - 0.740 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
66. MAU2 ENSGALG00000002969 10604 0.739 - - - - - - 0.739 - - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
67. WDR45B ENSGALG00000001563 5870 0.738 - - - - - - - 0.738 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
68. LUC7L3 ENSGALG00000007386 11944 0.738 - - - - - - - 0.738 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
69. MRPL28 ENSGALG00000007473 19134 0.737 - - - - - - - 0.737 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
70. TAF12 ENSGALG00000000991 8709 0.736 - - - - - - - 0.736 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
71. ITGB1 ENSGALG00000007145 19551 0.735 - - - - 0.735 - - - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
72. C2CD2 ENSGALG00000016148 2734 0.735 - - - - - - - 0.735 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
73. WDR82 ENSGALG00000025904 4783 0.735 - - - - - - - 0.735 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
74. POLDIP2 ENSGALG00000003211 11664 0.735 - - - - - - - 0.735 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
75. EMC1 ENSGALG00000003969 6876 0.734 - - - - - - - 0.734 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
76. SRP9 ENSGALG00000026009 12418 0.734 - - - - - - - 0.734 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
77. DLGAP4 ENSGALG00000001046 6872 0.734 - - - - - - - 0.734 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
78. CHST2 ENSGALG00000034507 6172 0.733 - - - - - - - 0.733 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
79. TNRC6A ENSGALG00000006068 9166 0.733 - - - - - - - 0.733 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
80. C1orf21 ENSGALG00000020922 4035 0.733 - - - - - - - 0.733 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
81. MRPL17 ENSGALG00000002605 46508 0.732 - - - - - - 0.732 - - - mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
82. UBE2J2 ENSGALG00000001848 6527 0.731 - - - - - - - 0.731 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
83. HIPK3 ENSGALG00000011695 6842 0.731 - - - - - - - 0.731 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
84. TMX3 ENSGALG00000013757 6387 0.731 - - - - - - - 0.731 - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
85. C5orf63 C5orf63 3718 0.731 - - - - - - - 0.731 - -
86. MRPL10 ENSGALG00000014387 12386 0.731 - - - - - - - 0.731 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
87. PPIB ENSGALG00000002210 46778 0.73 - - - - 0.730 - - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
88. VPS26A ENSGALG00000004174 9198 0.73 - - - - - - - 0.730 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
89. ITCH ENSGALG00000040474 2646 0.729 - - - - - - - 0.729 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
90. APPBP2 ENSGALG00000005314 6447 0.728 - - - - - - - 0.728 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
91. ASPM ENSGALG00000032398 12784 0.728 - - - - - - - 0.728 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
92. AARSD1 ENSGALG00000002880 3068 0.728 - - - - - - - 0.728 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
93. CDC73 ENSGALG00000002469 4586 0.728 - - - - - - - 0.728 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
94. CPEB2 ENSGALG00000014516 1187 0.727 - - - - - - - 0.727 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
95. PAM16 9684 0.727 - - - - - - - 0.727 - - presequence translocase associated motor 16 homolog, transcript variant X2
96. HVCN1 ENSGALG00000004562 2550 0.727 - - - - - - - 0.727 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
97. TLN2 2295 0.727 - - - - - - - 0.727 - - talin 2, transcript variant X5
98. HMOX1 ENSGALG00000012550 1186 0.726 - - - - - - - 0.726 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
99. UBE2Q2 3861 0.724 - - - - - - - 0.724 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
100. TARS ENSGALG00000003288 12702 0.724 - - - - - - - 0.724 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]

There are 46 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA