Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FAT3

Gene Name Gene ID Reads Annotation
FAT3 ENSGALG00000017229 141 FAT atypical cadherin 3 [Source:NCBI gene;Acc:395167]











Genes with expression patterns similar to FAT3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FAT3 ENSGALG00000017229 141 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 FAT atypical cadherin 3 [Source:NCBI gene;Acc:395167]
2. IKBIP ENSGALG00000026284 31 1.617 - - 0.863 - - - - - - 0.754 IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
3. TSPAN18 ENSGALG00000036901 14 0.907 - - 0.907 - - - - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
4. XYLT1 ENSGALG00000006757 169 0.887 - - 0.887 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
5. DINB1 DINB1 113 0.886 - - 0.886 - - - - - - -
6. ENSGALG00000006278 ENSGALG00000006278 202 0.872 - - 0.872 - - - - - - -
7. HOXA9 ENSGALG00000028983 9298 0.867 - - 0.867 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
8. FNDC7 ENSGALG00000001983 24 0.867 - - 0.867 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
9. ZBTB21 ENSGALG00000016147 13 0.867 - - 0.867 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
10. SATB2 ENSGALG00000008135 347 0.867 - - 0.867 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
11. ENSGALG00000000407 ENSGALG00000000407 32 0.862 - - 0.862 - - - - - - -
12. ENSGALG00000021882 ENSGALG00000021882 63 0.862 - - 0.862 - - - - - - -
13. ANKRD42 8 0.861 - - 0.861 - - - - - - - ankyrin repeat domain 42
14. SPTSSBL ENSGALG00000026131 70 0.861 - - 0.861 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
15. LHX6 ENSGALG00000001347 7 0.861 - - 0.861 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
16. DNAAF1 ENSGALG00000003258 115 0.859 - - 0.859 - - - - - - - dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
17. PLAG1 ENSGALG00000015407 17 0.857 - - 0.857 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
18. YDJC ENSGALG00000029198 14 0.857 - - 0.857 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
19. PLEKHJ1 ENSGALG00000000835 55 0.856 - - 0.856 - - - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
20. PSMD4 ENSGALG00000028505 16 0.856 - - 0.856 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
21. DNAH7 ENSGALG00000007841 32 0.856 - - 0.856 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
22. ENSGALG00000026975 ENSGALG00000026975 8 0.855 - - 0.855 - - - - - - -
23. LRRC56 ENSGALG00000041955 16 0.855 - - 0.855 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
24. KIF9 ENSGALG00000005517 70 0.853 - - 0.853 - - - - - - - kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
25. gga-mir-2954 ENSGALG00000026107 462 0.853 - - 0.853 - - - - - - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
26. IQGAP1 ENSGALG00000030162 1047 0.85 - - 0.850 - - - - - - - IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
27. CYP3A4 ENSGALG00000004436 75 0.847 - - 0.847 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
28. KIAA0226L KIAA0226L 95 0.846 - - - - - - - - - 0.846
29. TMEM230 ENSGALG00000036876 55 0.844 - - 0.844 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
30. NMRK1 ENSGALG00000015156 88 0.842 - - 0.842 - - - - - - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
31. DSG2 ENSGALG00000015142 67 0.841 - - 0.841 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
32. ENSGALG00000029120 ENSGALG00000029120 73 0.841 - - 0.841 - - - - - - -
33. CNTF ENSGALG00000026207 47 0.839 - - 0.839 - - - - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
34. UBE3C ENSGALG00000006461 57 0.835 - - 0.835 - - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
35. SLCO4C1 ENSGALG00000026768 30 0.834 - - 0.834 - - - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
36. C1orf131 C1orf131 141 0.834 - - 0.834 - - - - - - -
37. MMP9 ENSGALG00000006992 78 0.833 - - 0.833 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
38. SUPT20H ENSGALG00000017047 59 0.826 - - 0.826 - - - - - - - SPT20 homolog, SAGA complex component [Source:NCBI gene;Acc:418896]
39. CENPQ ENSGALG00000016692 293 0.826 - - - - - - - - - 0.826 centromere protein Q [Source:NCBI gene;Acc:422048]
40. TPST2 ENSGALG00000005626 945 0.824 - - 0.824 - - - - - - - tyrosylprotein sulfotransferase 2 [Source:NCBI gene;Acc:416910]
41. PDCD6IP ENSGALG00000033500 580 0.824 - - 0.824 - - - - - - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
42. PRKCZ ENSGALG00000001270 12 0.82 - - 0.820 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
43. ABHD14A 174 0.815 - - 0.815 - - - - - - - abhydrolase domain containing 14A
44. B3GNTL1 ENSGALG00000001433 22 0.815 - - 0.815 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
45. BTBD6 ENSGALG00000033813 163 0.814 - - 0.814 - - - - - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
46. LCOR ENSGALG00000028512 30 0.811 - - 0.811 - - - - - - - ligand dependent nuclear receptor corepressor, transcript variant X16
47. LEMD3 ENSGALG00000009873 347 0.809 - - 0.809 - - - - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
48. MTMR10 85 0.808 - - 0.808 - - - - - - - myotubularin related protein 10
49. SNX29 ENSGALG00000039855 676 0.806 - - 0.806 - - - - - - - sorting nexin 29 [Source:HGNC Symbol;Acc:HGNC:30542]
50. ITGB2 ENSGALG00000007511 46 0.803 - - 0.803 - - - - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
51. SAMSN1 ENSGALG00000040926 88 0.801 - - 0.801 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
52. SUSD4 ENSGALG00000009388 48 0.801 - - 0.801 - - - - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
53. AUH ENSGALG00000021843 349 0.801 - - 0.801 - - - - - - - AU RNA binding methylglutaconyl-CoA hydratase [Source:NCBI gene;Acc:427269]
54. SIRT1 ENSGALG00000002761 9028 0.801 - - 0.801 - - - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
55. ENSGALG00000026925 ENSGALG00000026925 119 0.8 - - - - - - - - - 0.800
56. WDR48 ENSGALG00000006052 3575 0.8 - - 0.800 - - - - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
57. CFLAR ENSGALG00000008240 1077 0.799 - - 0.799 - - - - - - - CASP8 and FADD like apoptosis regulator [Source:NCBI gene;Acc:424080]
58. MDM2 ENSGALG00000009942 397 0.799 - - 0.799 - - - - - - - MDM2 proto-oncogene [Source:NCBI gene;Acc:395609]
59. EXTL2 ENSGALG00000027984 808 0.799 - - - - - - - - - 0.799 exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
60. ENSGALG00000020700 ENSGALG00000020700 44 0.799 - - - - - - - - - 0.799
61. PNMT ENSGALG00000027281 14 0.797 - - - - - - - - - 0.797 phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
62. FBXL4 ENSGALG00000015490 12 0.797 - - - - - - - - - 0.797 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
63. TMEM159 ENSGALG00000027173 67 0.796 - - 0.796 - - - - - - - transmembrane protein 159 [Source:HGNC Symbol;Acc:HGNC:30136]
64. SAPCD2 12 0.794 - - - - - - - - - 0.794 suppressor APC domain containing 2, transcript variant X1
65. ROGDI ENSGALG00000001841 313 0.793 - - 0.793 - - - - - - - rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
66. TMEM150C ENSGALG00000011175 218 0.793 - - 0.793 - - - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
67. KIAA1549 ENSGALG00000012796 60 0.791 - - 0.791 - - - - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
68. REEP2 ENSGALG00000017365 338 0.79 - - 0.790 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
69. RGS2 ENSGALG00000042744 2075 0.79 - - - - - - - 0.790 - - regulator of G-protein signaling 2 [Source:NCBI gene;Acc:378912]
70. AFTPH ENSGALG00000008828 21 0.789 - - 0.789 - - - - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
71. NSL1/DC31 NSL1/DC31 43 0.788 - - 0.788 - - - - - - -
72. SBF2 ENSGALG00000005716 134 0.788 - - 0.788 - - - - - - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
73. LRP1B ENSGALG00000012407 125 0.788 - - 0.788 - - - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
74. DAB2IP ENSGALG00000001419 100 0.786 - - 0.786 - - - - - - - DAB2 interacting protein [Source:HGNC Symbol;Acc:HGNC:17294]
75. STK38 ENSGALG00000000523 44 0.784 - - 0.784 - - - - - - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
76. MYOF ENSGALG00000006705 793 0.784 - - - - - - - - - 0.784 myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
77. RFXAP ENSGALG00000019087 37 0.784 - - - - - - - - - 0.784 regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
78. HNF4G ENSGALG00000042621 484 0.783 - - 0.783 - - - - - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
79. RICTOR ENSGALG00000003775 247 0.781 - - 0.781 - - - - - - - RPTOR independent companion of MTOR complex 2 [Source:HGNC Symbol;Acc:HGNC:28611]
80. SH3RF1 ENSGALG00000009692 46 0.779 - - - - - - - - - 0.779 SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
81. CCR4 ENSGALG00000039146 20 0.776 - - - - - - - - - 0.776 C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
82. MUC6 ENSGALG00000040530 11 0.776 - - - - - - - - - 0.776 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
83. NAGPA 5 0.776 - - - - - - - - - 0.776 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, transcript variant X5
84. TRH ENSGALG00000008490 16 0.776 - - - - - - - - - 0.776 thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
85. SIDT1 ENSGALG00000014812 20 0.776 - - - - - - - - - 0.776 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
86. DRAM1 ENSGALG00000012761 53 0.776 - - - - - - - - - 0.776 DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
87. DSTYK ENSGALG00000041123 12 0.776 - - - - - - - - - 0.776 dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
88. PSTPIP1 ENSGALG00000002786 9 0.776 - - - - - - - - - 0.776 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
89. CNTNAP4 ENSGALG00000023179 13 0.776 - - - - - - - - - 0.776 contactin associated protein like 4
90. NFKBIA ENSGALG00000027864 1158 0.775 - - - - - - - - - 0.775 NFKB inhibitor alpha [Source:NCBI gene;Acc:396093]
91. LOXL1 ENSGALG00000028247 672 0.775 - - 0.775 - - - - - - - lysyl oxidase like 1
92. SLC9A7 ENSGALG00000016734 146 0.774 - - 0.774 - - - - - - - solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]
93. SPSB3 ENSGALG00000002285 1329 0.773 - - 0.773 - - - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
94. CEP128 ENSGALG00000010562 133 0.771 - - 0.771 - - - - - - - centrosomal protein 128 [Source:HGNC Symbol;Acc:HGNC:20359]
95. ISOC1 ENSGALG00000000161 46 0.77 - - - - - - - - - 0.770 isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
96. ARL15 ENSGALG00000014911 13 0.768 - - - - - - - - - 0.768 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
97. DRD2 ENSGALG00000007794 399 0.768 - - - - - - - - - 0.768 dopamine receptor D2 [Source:NCBI gene;Acc:428252]
98. DSEL ENSGALG00000042505 92 0.767 - - 0.767 - - - - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
99. CLIC3 ENSGALG00000038789 233 0.767 - - 0.767 - - - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
100. SLC25A46 ENSGALG00000000253 226 0.766 - - 0.766 - - - - - - - solute carrier family 25 member 46 [Source:NCBI gene;Acc:415610]

There are 75 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA