Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FARSB

Gene Name Gene ID Reads Annotation
FARSB ENSGALG00000005236 10738 phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]











Genes with expression patterns similar to FARSB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FARSB ENSGALG00000005236 10738 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
2. PES1 ENSGALG00000007778 12248 1.617 - - - - - - 0.805 0.812 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
3. UBE2B ENSGALG00000032664 6069 1.601 - - - - - - 0.789 0.812 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
4. PARP1 ENSGALG00000009228 39433 1.599 - - - - - - 0.840 0.759 - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
5. PPP2R5D ENSGALG00000040005 6804 1.59 - - - - - - 0.813 0.777 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
6. CMPK CMPK 9569 1.555 - - - - - - 0.753 0.802 - -
7. DEK ENSGALG00000012684 14179 1.545 - - - - - - 0.732 0.813 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
8. ENSGALG00000014171 ENSGALG00000014171 10383 1.545 - - - - - - 0.752 0.793 - -
9. SHISA5 ENSGALG00000004661 8573 1.539 - - - - - - 0.708 0.831 - - shisa family member 5 [Source:NCBI gene;Acc:415948]
10. CHEK2 ENSGALG00000005695 1558 1.53 - - - - - - 0.732 0.798 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
11. MRPL40 ENSGALG00000001587 20893 1.529 - - - - - - 0.790 - - 0.739 mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
12. WDR61 ENSGALG00000003221 11352 1.52 - - - - - - 0.716 0.804 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
13. CASK ENSGALG00000042400 8485 1.507 - - - - - - 0.764 0.743 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
14. HEXA ENSGALG00000043828 4789 1.497 - - - - - - 0.703 0.794 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
15. NEK1 ENSGALG00000009683 4305 1.496 - - - - - - 0.700 0.796 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
16. ASF1A ENSGALG00000014887 11319 1.495 - - - - - - 0.751 0.744 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
17. TAB2 ENSGALG00000012356 3467 1.494 - - - - - - 0.700 0.794 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
18. TET1 ENSGALG00000031604 13002 1.469 - - - - - - 0.741 0.728 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
19. CHP1 ENSGALG00000008569 6876 1.469 - - - - - - 0.757 0.712 - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
20. gga-mir-6599 ENSGALG00000028121 4746 1.467 - - 0.734 - - - 0.733 - - - gga-mir-6599 [Source:miRBase;Acc:MI0022544]
21. ACADS ENSGALG00000007072 2737 1.464 - - - - - - 0.745 0.719 - - acyl-CoA dehydrogenase short chain [Source:NCBI gene;Acc:416969]
22. ACTN1 ENSGALG00000042458 10477 1.442 - - - - - - 0.704 0.738 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
23. SUMO1 ENSGALG00000008435 19847 0.95 - - - - - - - 0.950 - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
24. ADD3 ENSGALG00000008542 13814 0.946 - - - - - - - 0.946 - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
25. E2F6 ENSGALG00000016454 4747 0.943 - - - - - - - 0.943 - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
26. RBM38 ENSGALG00000026081 7115 0.925 - - - - - - - 0.925 - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
27. COMMD10 ENSGALG00000002308 7442 0.892 - - - - - - 0.892 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
28. UCHL3 ENSGALG00000016921 16208 0.891 - - - - - - 0.891 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
29. TMEM167A ENSGALG00000027332 13862 0.886 - - - - - - 0.886 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
30. SMC4 ENSGALG00000009553 15715 0.88 - - - - - - 0.880 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
31. LLPH ENSGALG00000019358 20976 0.875 - - - - - - 0.875 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
32. EIF4A2 ENSGALG00000008684 58507 0.872 - - - - - - 0.872 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
33. ENY2 ENSGALG00000036618 30314 0.868 - - - - - - 0.868 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
34. MRPL15 ENSGALG00000041086 16820 0.868 - - - - - - 0.868 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
35. GABARAPL2 ENSGALG00000003208 9195 0.868 - - - - - - 0.868 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
36. ECI1 ENSGALG00000031563 11326 0.867 - - - - - - 0.867 - - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
37. ADSL ENSGALG00000012034 10280 0.866 - - - - - - 0.866 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
38. C4H4ORF52 C4H4ORF52 8116 0.866 - - - - - - 0.866 - - -
39. CHTF8 ENSGALG00000000632 7230 0.864 - - - - - - 0.864 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
40. CYC CYC 8740 0.862 - - - - - - 0.862 - - -
41. NDUFA12 ENSGALG00000011325 19807 0.856 - - - - - - 0.856 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
42. BMS1 ENSGALG00000002624 8339 0.855 - - - - - - 0.855 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
43. LGALS1 ENSGALG00000012420 13993 0.854 - - - - - - 0.854 - - - galectin 1 [Source:NCBI gene;Acc:396491]
44. NDUFV2 ENSGALG00000036625 29234 0.854 - - - - - - 0.854 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
45. YWHAZ ENSGALG00000031387 84985 0.853 - - - - - - 0.853 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
46. METTL23 ENSGALG00000001790 7906 0.853 - - - - - - 0.853 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
47. ASAP1 ENSGALG00000037618 2887 0.852 - - - - - - 0.852 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
48. C11H16ORF80 C11H16ORF80 18673 0.852 - - - - - - 0.852 - - -
49. R3HDM1 ENSGALG00000012246 6580 0.851 - - - - - - 0.851 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
50. TMEM30A ENSGALG00000015904 8533 0.851 - - - - - - 0.851 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
51. CSE1L ENSGALG00000004707 20653 0.848 - - - - - - 0.848 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
52. ZNF593 ENSGALG00000000542 79105 0.848 - - - - - - 0.848 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
53. RABGGTB ENSGALG00000011388 11654 0.846 - - - - - - 0.846 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
54. NOC4L ENSGALG00000002272 9644 0.844 - - - - - - 0.844 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
55. FAM160B1 ENSGALG00000031404 3153 0.843 - - - - - - 0.843 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
56. RANBP1 ENSGALG00000002107 17715 0.842 - - - - - - 0.842 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
57. SIVA1 ENSGALG00000011619 15130 0.842 - - - - - - 0.842 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
58. BSG ENSGALG00000001328 37947 0.841 - - - - - - 0.841 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
59. EBNA1BP2 ENSGALG00000009045 17453 0.841 - - - - - - 0.841 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
60. PFDN2 ENSGALG00000026374 22020 0.84 - - - - - - - 0.840 - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
61. ENSGALG00000017396 ENSGALG00000017396 9028 0.84 - - - - - - 0.840 - - -
62. GLRX3 ENSGALG00000010464 22578 0.839 - - - - - - 0.839 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
63. CHMP3 ENSGALG00000015805 11581 0.839 - - - - - - 0.839 - - - charged multivesicular body protein 3
64. RPS3A ENSGALG00000010077 292185 0.838 - - - - - - 0.838 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
65. NUP85 ENSGALG00000007974 21249 0.838 - - - - - - 0.838 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
66. FCF1 ENSGALG00000010275 24928 0.838 - - - - - - 0.838 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
67. CTSL2 CTSL2 7966 0.836 - - - - - - 0.836 - - -
68. TERF2 ENSGALG00000000657 7865 0.835 - - - - - - 0.835 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
69. MADH2 MADH2 13017 0.835 - - - - - - 0.835 - - -
70. PLRG1 ENSGALG00000009257 8613 0.833 - - - - - - 0.833 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
71. MED17 ENSGALG00000017218 5821 0.833 - - - - - - 0.833 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
72. GABPB1 ENSGALG00000023440 5676 0.833 - - - - - - 0.833 - - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
73. MKI67 ENSGALG00000025996 28136 0.833 - - - - - - - 0.833 - - marker of proliferation Ki-67, transcript variant X3
74. RPS17 ENSGALG00000002157 142120 0.833 - - - - - - 0.833 - - - ribosomal protein S17 [Source:NCBI gene;Acc:374053]
75. RBM17 ENSGALG00000006332 12656 0.832 - - - - - - 0.832 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
76. PREP ENSGALG00000015405 17050 0.832 - - - - - - 0.832 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
77. CCNC ENSGALG00000015471 6497 0.831 - - - - - - 0.831 - - - cyclin C [Source:NCBI gene;Acc:421791]
78. TIPRL ENSGALG00000015246 7875 0.831 - - - - - - 0.831 - - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
79. CCNDBP1 ENSGALG00000004837 11520 0.831 - - - - - - 0.831 - - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
80. DERL1 ENSGALG00000033950 15074 0.831 - - - - - - 0.831 - - - derlin 1 [Source:NCBI gene;Acc:420350]
81. RBBP4 ENSGALG00000003522 72455 0.83 - - - - - - 0.830 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
82. NOP58 ENSGALG00000008454 34630 0.83 - - - - - - 0.830 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
83. FANCL ENSGALG00000030022 7423 0.83 - - - - - - 0.830 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
84. AP2A2 ENSGALG00000006799 13874 0.828 - - - - - - 0.828 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
85. COX7C ENSGALG00000027963 84312 0.828 - - - - - - 0.828 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
86. TOR1AIP1 ENSGALG00000029238 5843 0.828 - - - - - - 0.828 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
87. GPC4 ENSGALG00000006080 56498 0.828 - - - - - - 0.828 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
88. ATG3 ENSGALG00000015204 11277 0.828 - - - - - - 0.828 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
89. NDUFC2 ENSGALG00000029172 26136 0.827 - - - - - - 0.827 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
90. GLO1 ENSGALG00000010127 31662 0.827 - - - - - - 0.827 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
91. CENPP ENSGALG00000004687 6707 0.826 - - - - - - 0.826 - - - centromere protein P [Source:NCBI gene;Acc:415952]
92. RIOK2 ENSGALG00000015288 6280 0.826 - - - - - - 0.826 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
93. PGAM5 ENSGALG00000002137 7700 0.826 - - - - - - 0.826 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
94. NDUFB3 ENSGALG00000008239 15511 0.826 - - - - - - 0.826 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
95. Sep-05 Sep-05 5887 0.826 - - - - - - 0.826 - - -
96. AP1B1 ENSGALG00000042213 4828 0.825 - - - - - - 0.825 - - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
97. IARS ENSGALG00000004813 12936 0.825 - - - - - - 0.825 - - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
98. MRPL50 ENSGALG00000015543 11649 0.825 - - - - - - 0.825 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
99. NID2 ENSGALG00000012394 6717 0.824 - - - - - - 0.824 - - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
100. GNG2 ENSGALG00000027629 9404 0.824 - - - - - - 0.824 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]

There are 689 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA