Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FAM3D

Gene Name Gene ID Reads Annotation
FAM3D ENSDARG00000091625 1392 family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]










Genes with expression patterns similar to FAM3D

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. FAM3D ENSDARG00000091625 1392 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
2. plekhf2 ENSDARG00000021141 529 2.334 - - - - - 0.847 0.724 0.763 - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
3. vasp vasp 3925 2.325 0.743 - - - - 0.748 0.834 - -
4. abcg1 ENSDARG00000063475 97 1.847 - - - - - - - 0.904 0.943 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
5. CABZ01054405.1 CABZ01054405.1 115 1.846 - - - - - - - 0.898 0.948
6. CR376785.2 CR376785.2 175 1.815 - - - - - - - 0.877 0.938
7. ints8 ENSDARG00000057986 1063 1.783 - - - - - - - 0.892 0.891 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
8. dhrs13a.2 ENSDARG00000111240 491 1.775 - - - - - - 0.854 - 0.921 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
9. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.773 - - - - - - - 0.828 0.945 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
10. alox5 alox5 406 1.772 - - - - - - 0.859 0.913 -
11. tm9sf4 ENSDARG00000002536 1684 1.758 - - - - - - - 0.895 0.863 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
12. slc25a43 ENSDARG00000102048 489 1.737 - - - - - - - 0.802 0.935 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
13. NUAK1_1 NUAK1_1 1782 1.731 - 0.999 - - - - - 0.732 -
14. ipo13 ENSDARG00000060618 827 1.727 - - - - - - 0.823 - 0.904 importin 13 [Source:ZFIN;Acc:ZDB-GENE-070706-1]
15. srpr 5148 1.722 - - - - - - 0.820 - 0.902 signal recognition particle receptor (docking protein)
16. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.711 - - - - - - 0.864 - 0.847 deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
17. EPS8L1 891 1.705 - - - - - - 0.786 - 0.919 eps8-like1, transcript variant X3
18. dkk3b ENSDARG00000070683 209 1.697 - - - - - 0.761 - - 0.936 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
19. tusc2b ENSDARG00000025340 2391 1.687 - - - - - - 0.817 - 0.870 tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
20. ctnnal1 ENSDARG00000018162 747 1.683 - - - - - 0.765 - - 0.918 catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
21. si:ch211-179l5.5 si:ch211-179l5.5 249 1.67 - - - - - 0.791 0.879 - -
22. ezrb ENSDARG00000025091 2861 1.67 - - - - - - 0.811 - 0.859 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
23. CFP ENSDARG00000094451 852 1.667 - - - - - - 0.787 - 0.880 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
24. zgc:109949 ENSDARG00000103413 426 1.667 - - - - - - - 0.763 0.904 zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
25. ikbkb ENSDARG00000079123 498 1.665 - - - - - - 0.744 - 0.921 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
26. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.662 - - - - - 0.902 0.760 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
27. nt5dc2 ENSDARG00000059646 3878 1.659 - 0.899 - - - 0.760 - - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
28. tpst1 ENSDARG00000073872 2490 1.658 - - - 0.745 - - - - 0.913 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
29. dlx4a ENSDARG00000011956 882 1.65 - - - - - - 0.878 0.772 - distal-less homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-980526-73]
30. thsd7ba ENSDARG00000095022 231 1.645 - - - - - - - 0.721 0.924 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
31. CABZ01028296.1 CABZ01028296.1 6203 1.637 - 0.900 - - - - - - 0.737
32. CU571336.1 ENSDARG00000099892 2164 1.636 - - - - - - 0.800 - 0.836
33. muc13a ENSDARG00000069559 985 1.631 - - - - - - 0.746 0.885 - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
34. nudcd1 ENSDARG00000036158 608 1.626 - - - - - 0.723 - 0.903 - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
35. foxred2 ENSDARG00000061354 718 1.617 - - - - - - 0.707 - 0.910 FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]
36. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.613 - 0.881 - - - 0.732 - - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
37. si:ch211-117m20.5 ENSDARG00000091996 7246 1.612 - - - - - 0.754 - 0.858 - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
38. si:dkey-121j17.6 ENSDARG00000069661 456 1.612 - - - - - - 0.710 0.902 - si:dkey-121j17.6 [Source:ZFIN;Acc:ZDB-GENE-121214-361]
39. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 1.611 - - - - - 0.711 - 0.900 - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
40. mlec ENSDARG00000059630 2057 1.61 - - - - - 0.791 0.819 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
41. TMEM87A TMEM87A 2407 1.609 - - - - - - 0.786 0.823 -
42. zgc:165481 ENSDARG00000060092 95 1.605 - - - - - - 0.729 0.876 - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
43. ap1s3b ENSDARG00000027966 1064 1.604 - - - - - - 0.727 0.877 - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
44. samd13 ENSDARG00000062977 331 1.598 0.766 - - - - - 0.832 - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
45. fam102bb ENSDARG00000002333 1483 1.594 - - - - - - - 0.708 0.886 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
46. bambia ENSDARG00000055381 2922 1.593 - - - - - 0.739 0.854 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
47. pcdh1b ENSDARG00000036175 101 1.593 - - - - - 0.738 - 0.855 - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
48. ap5s1 ENSDARG00000076755 318 1.581 - - - - - - 0.769 0.812 - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
49. syngr2a ENSDARG00000052429 3431 1.58 - - - - - 0.707 - 0.873 - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
50. lrata ENSDARG00000037278, ENSDARG00000112503 1510 1.572 - - - - - - 0.726 0.846 - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
51. cwc25 ENSDARG00000003382 2134 1.57 - - - - - - 0.712 - 0.858 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
52. si:dkey-247i3.3 si:dkey-247i3.3 297 1.568 - - - - - - 0.710 0.858 -
53. trim25l ENSDARG00000020863 292 1.563 - - - - - 0.763 0.800 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
54. rad18 ENSDARG00000027938 574 1.563 - - - - - 0.749 0.814 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
55. tom1 ENSDARG00000104581 1457 1.562 - - - - - - 0.758 - 0.804 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
56. rpp40 ENSDARG00000017605 63 1.557 - - - - - 0.704 0.853 - - ribonuclease P/MRP 40 subunit [Source:ZFIN;Acc:ZDB-GENE-040625-161]
57. megf6a ENSDARG00000079199 103 1.555 - - - - - 0.818 0.737 - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
58. paqr6 ENSDARG00000041483 795 1.552 - - - - - 0.803 - 0.749 - progestin and adipoQ receptor family member VI [Source:ZFIN;Acc:ZDB-GENE-090714-1]
59. ubald1b ENSDARG00000020976 1162 1.547 - - - - - - 0.704 0.843 - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
60. tmem205 ENSDARG00000100677 101 1.547 - - - - - 0.721 0.826 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
61. gale ENSDARG00000002401 5489 1.535 - - - - - - 0.760 0.775 - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
62. scamp2l ENSDARG00000017010 491 1.534 - - - - - - 0.786 0.748 - secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
63. btr12 ENSDARG00000051809 1804 1.531 - - - - - 0.701 0.830 - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
64. cyp2aa3 ENSDARG00000103347 880 1.526 - - - - - 0.774 0.752 - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
65. mmp9 ENSDARG00000042816 298 1.52 - - - - - 0.817 0.703 - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
66. CU928070.1 CU928070.1 1152 1.519 - - - - - 0.783 0.736 - -
67. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 1.513 - - - - - 0.722 0.791 - - Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
68. slc25a36a ENSDARG00000038731, ENSDARG00000111673 2008 1.512 - - - - - 0.702 - - 0.810 solute carrier family 25 (pyrimidine nucleotide carrier ), member 36a [Source:ZFIN;Acc:ZDB-GENE-040718-415]
69. gbp2 ENSDARG00000038669 91 1.511 - - - - - 0.752 0.759 - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
70. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.508 - - - - - 0.745 - 0.763 - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
71. si:dkey-184p9.7 ENSDARG00000092726 2679 1.501 - - - - - - - 0.800 0.701 si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
72. pdxdc1 ENSDARG00000101886 1958 1.496 0.742 - - - - - 0.754 - - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
73. mllt4 mllt4 2939 1.489 - - - - - 0.754 - - 0.735
74. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 1.485 - - - - - 0.735 0.750 - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
75. zgc:136439 ENSDARG00000009267 720 1.461 - - - - - 0.727 0.734 - - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
76. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.442 - - - - - 0.709 0.733 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
77. nr1d2a ENSDARG00000003820 452 1.432 - - - - - 0.721 - 0.711 - nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]
78. ptbp1a ENSDARG00000019362 6290 1.43 - - - - - 0.715 0.715 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
79. decr1 ENSDARG00000003869 1344 1 - 1.000 - - - - - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
80. rmi1 ENSDARG00000041376 674 1 - 1.000 - - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
81. rasef ENSDARG00000076250 1359 0.999 - 0.999 - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
82. rad21a_1 ENSDARG00000006092 4482 0.999 - 0.999 - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
83. stag1b ENSDARG00000062137 1814 0.999 - 0.999 - - - - - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
84. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 0.999 - 0.999 - - - - - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
85. TMEM200B TMEM200B 554 0.999 - 0.999 - - - - - - -
86. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.999 - 0.999 - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
87. dact1 ENSDARG00000101635 1303 0.999 - 0.999 - - - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
88. si:dkey-197c15.6 ENSDARG00000079401 745 0.999 - 0.999 - - - - - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
89. CHCHD3 CHCHD3 1425 0.999 - 0.999 - - - - - - -
90. nit2 ENSDARG00000017590 1393 0.999 - 0.999 - - - - - - - nitrilase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-65]
91. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 0.999 - 0.999 - - - - - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
92. hccsa hccsa 869 0.999 - 0.999 - - - - - - -
93. lims2 ENSDARG00000014976 1248 0.999 - 0.999 - - - - - - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
94. MRPL42 ENSDARG00000079391 1403 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
95. nanos1 ENSDARG00000109337 2494 0.999 - 0.999 - - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
96. STMN3 ENSDARG00000038465 1009 0.999 - 0.999 - - - - - - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
97. MED17 ENSDARG00000006345 779 0.999 - 0.999 - - - - - - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
98. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 0.999 - 0.999 - - - - - - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
99. rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 0.999 - 0.999 - - - - - - - retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]
100. TMPPE ENSDARG00000036059, ENSDARG00000114955 567 0.999 - 0.999 - - - - - - - transmembrane protein with metallophosphoesterase domain [Source:ZFIN;Acc:ZDB-GENE-061013-104]

There are 1693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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