Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FAM188B

Gene Name Gene ID Reads Annotation
FAM188B 2097 family with sequence similarity 188 member B











Genes with expression patterns similar to FAM188B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. FAM188B 2097 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 family with sequence similarity 188 member B
2. MYO5A ENSGALG00000031987 2469 1.567 - - 0.856 - - - - 0.711 - - myosin VA [Source:NCBI gene;Acc:396237]
3. PUS1 ENSGALG00000002354 10153 1.503 - - 0.767 - - - - 0.736 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
4. CYP27A1 ENSGALG00000002470 321 0.947 - - 0.947 - - - - - - - cytochrome P450 family 27 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2605]
5. EMILIN2 ENSGALG00000032997 2460 0.946 - - 0.946 - - - - - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
6. ANXA8 ENSGALG00000005956 479 0.944 - - 0.944 - - - - - - - annexin A8, transcript variant X1
7. FAM171B ENSGALG00000002646 837 0.939 - - 0.939 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
8. SOAT1 ENSGALG00000004205 2394 0.931 - - 0.931 - - - - - - - sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]
9. CRCP ENSGALG00000002587 8809 0.928 - - 0.928 - - - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
10. YWHAQ ENSGALG00000016433 3450 0.921 - - 0.921 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
11. ZC3H18 2569 0.915 - - 0.915 - - - - - - - zinc finger CCCH-type containing 18, transcript variant X3
12. RAB10 ENSGALG00000016535 5272 0.914 - - 0.914 - - - - - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
13. MAN2B2 ENSGALG00000015537 2267 0.909 - - 0.909 - - - - - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
14. SDAD1 ENSGALG00000011543 5191 0.9 - - 0.900 - - - - - - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
15. GTF2IRD1 ENSGALG00000001263 14716 0.898 - - 0.898 - - - - - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
16. GBE1 ENSGALG00000042771 2323 0.897 - - 0.897 - - - - - - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
17. RAB34 ENSGALG00000026315 1193 0.894 - - 0.894 - - - - - - - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
18. ENSGALG00000028164 ENSGALG00000028164 3325 0.894 - - 0.894 - - - - - - -
19. VMA21 ENSGALG00000009065 6432 0.892 - - 0.892 - - - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
20. PPT1 ENSGALG00000003936 2540 0.89 - - 0.890 - - - - - - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
21. TMEM41B ENSGALG00000005815 2049 0.887 - - 0.887 - - - - - - - transmembrane protein 41B [Source:NCBI gene;Acc:423047]
22. RAD51AP1 ENSGALG00000017290 3807 0.878 - - 0.878 - - - - - - - RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]
23. STK3 ENSGALG00000032850 6339 0.871 - - 0.871 - - - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
24. FAT1 ENSGALG00000013579 6030 0.87 - - 0.870 - - - - - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
25. MAP4K3 ENSGALG00000039720 5124 0.859 - - 0.859 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
26. ATOX1 ENSGALG00000004176 16486 0.858 - - 0.858 - - - - - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
27. MAEA ENSGALG00000013310 13230 0.854 - - 0.854 - - - - - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
28. MRPS34 ENSGALG00000001792 14262 0.85 - - 0.850 - - - - - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
29. SLC25A20 ENSGALG00000028227 7685 0.847 - - 0.847 - - - - - - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
30. THOC2 ENSGALG00000008507 9501 0.847 - - 0.847 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
31. BMS1 ENSGALG00000002624 8339 0.847 - - 0.847 - - - - - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
32. CKB ENSGALG00000011511 2100 0.844 - - 0.844 - - - - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
33. ST5 6869 0.842 - - 0.842 - - - - - - - suppression of tumorigenicity 5, transcript variant X1
34. NXT2 ENSGALG00000008092 2477 0.841 - - 0.841 - - - - - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
35. VIPAS39 ENSGALG00000010459 2090 0.841 - - - - - - - - 0.841 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
36. TOR1AIP1 ENSGALG00000029238 5843 0.839 - - 0.839 - - - - - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
37. REST 2394 0.837 - - 0.837 - - - - - - - RE1 silencing transcription factor
38. ACBD6 ACBD6 4293 0.837 - - 0.837 - - - - - - -
39. SLC9A3R2 ENSGALG00000005608 4220 0.837 - - 0.837 - - - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
40. BRCC3 ENSGALG00000005383 4844 0.835 - - 0.835 - - - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
41. GTF2A1 ENSGALG00000010576 4570 0.832 - - 0.832 - - - - - - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
42. SLC25A4 ENSGALG00000010614 9970 0.83 - - 0.830 - - - - - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
43. MRPS35 ENSGALG00000036730 6327 0.83 - - 0.830 - - - - - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
44. CREB3L2 ENSGALG00000012877 2515 0.826 - - 0.826 - - - - - - - cAMP responsive element binding protein 3 like 2 [Source:HGNC Symbol;Acc:HGNC:23720]
45. ENSGALG00000012158 ENSGALG00000012158 11937 0.825 - - 0.825 - - - - - - -
46. SETD1B ENSGALG00000004324 2897 0.823 - - 0.823 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
47. MAP1B ENSGALG00000014999 6288 0.822 - - 0.822 - - - - - - - microtubule associated protein 1B
48. NFI1 NFI1 6210 0.821 - - 0.821 - - - - - - -
49. HCCS ENSGALG00000005571 4939 0.821 - - - - - - - 0.821 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
50. FAM174A ENSGALG00000026203 8369 0.818 - - - - - - - 0.818 - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
51. DHFR ENSGALG00000026757 18478 0.816 - - 0.816 - - - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
52. ENSGALG00000004032 ENSGALG00000004032 2010 0.816 - - 0.816 - - - - - - -
53. NIP7 ENSGALG00000000650 23932 0.816 - - - - - - - 0.816 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
54. FGF12 ENSGALG00000036971 2631 0.815 - - - - - - - - 0.815 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
55. CBLL1 ENSGALG00000038981 6725 0.815 - - 0.815 - - - - - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
56. ZCCHC10 ENSGALG00000036666 5148 0.812 - - 0.812 - - - - - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
57. WTAP ENSGALG00000011660 10811 0.811 - - 0.811 - - - - - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
58. ELP3 ENSGALG00000016624 4483 0.811 - - - - - - - - 0.811 - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
59. LARS ENSGALG00000007494 13966 0.81 - - 0.810 - - - - - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
60. ADIPOR2 ENSGALG00000035533 6523 0.808 - - 0.808 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
61. SMC4 ENSGALG00000009553 15715 0.807 - - 0.807 - - - - - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
62. SENP6 ENSGALG00000015901 8013 0.805 - - 0.805 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
63. G6PC2 ENSGALG00000010899 260 0.803 - - - - - - - - 0.803 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
64. URM1 ENSGALG00000004971 17880 0.802 - - 0.802 - - - - - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
65. YBX1 ENSGALG00000004848 20992 0.802 - - 0.802 - - - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
66. DNAJB14 ENSGALG00000014026 598 0.8 - - - - - - - - 0.800 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
67. RIF1 ENSGALG00000012484 2248 0.797 - - - - - - - - 0.797 - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
68. KPNA2 ENSGALG00000003584 76058 0.797 - - 0.797 - - - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
69. GHITM ENSGALG00000021262 7159 0.797 - - 0.797 - - - - - - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
70. IDH1 ENSGALG00000008818 17613 0.797 - - 0.797 - - - - - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
71. PAN3 ENSGALG00000017092 5387 0.797 - - - - - - - - 0.797 - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
72. ATG4B ENSGALG00000006298 2288 0.796 - - - - - - - 0.796 - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
73. CTBPL ENSGALG00000007642 14238 0.795 - - 0.795 - - - - - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
74. RBMS1 ENSGALG00000011132 569 0.795 - - - - - - - - 0.795 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
75. PTTG1 17936 0.794 - - 0.794 - - - - - - - pituitary tumor-transforming 1, transcript variant X1
76. ENSGALG00000021611 ENSGALG00000021611 1551 0.793 - - - - - - - - 0.793 -
77. ZADH2 ENSGALG00000022882 11790 0.791 - - - - - - - 0.791 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
78. RANBP3 ENSGALG00000000577 8856 0.791 - - 0.791 - - - - - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
79. GTF2H5 ENSGALG00000013733 12293 0.791 - - 0.791 - - - - - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
80. HDHD2 ENSGALG00000034801 6373 0.786 - - 0.786 - - - - - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
81. UBXN2A ENSGALG00000016497 2444 0.785 - - - - - - - - 0.785 - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
82. GPC1 ENSGALG00000040316 13364 0.785 - - 0.785 - - - - - - - glypican 1 [Source:NCBI gene;Acc:424770]
83. TFG ENSGALG00000015299 849 0.785 - - - - - - - - 0.785 - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
84. KIAA0232 ENSGALG00000015538 717 0.784 - - - - - - - - 0.784 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
85. RAD18 ENSGALG00000008368 7214 0.783 - - 0.783 - - - - - - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
86. SYF2 ENSGALG00000013639 267 0.783 - - - - - - - - 0.783 - SYF2 pre-mRNA splicing factor [Source:NCBI gene;Acc:419593]
87. OSBPL11 ENSGALG00000012059 2523 0.782 - - - - - - - - 0.782 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
88. CERK ENSGALG00000019397 4511 0.781 - - - - - - 0.781 - - - ceramide kinase [Source:NCBI gene;Acc:425523]
89. HCFC2 ENSGALG00000029616 4525 0.781 - - - - - - - - 0.781 - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
90. ELOVL5 ENSGALG00000016314 18163 0.781 - - 0.781 - - - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
91. OTUD6B ENSGALG00000041337 15657 0.779 - - 0.779 - - - - - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
92. C10orf88 ENSGALG00000000011 6026 0.779 - - - - - - - 0.779 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
93. C1H21ORF91 ENSGALG00000028290 5550 0.779 - - - - - - - 0.779 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
94. CYB5A ENSGALG00000013708 8287 0.779 - - 0.779 - - - - - - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
95. VEZT ENSGALG00000011357 2476 0.778 - - - - - - - 0.778 - - vezatin, adherens junctions transmembrane protein [Source:HGNC Symbol;Acc:HGNC:18258]
96. SFMBT2 ENSGALG00000009279 125 0.778 - - - - - - - - 0.778 - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
97. CTSA ENSGALG00000006876 5380 0.778 - - 0.778 - - - - - - - cathepsin A [Source:NCBI gene;Acc:428163]
98. MRPS36 ENSGALG00000014789 7584 0.778 - - 0.778 - - - - - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
99. TPP1 52 0.777 - - - - - - - - 0.777 - tripeptidyl peptidase 1
100. CAT ENSGALG00000030187 7534 0.776 - - 0.776 - - - - - - - catalase [Source:NCBI gene;Acc:423600]

There are 229 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA