Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for F3

Gene Name Gene ID Reads Annotation
F3 ENSGALG00000005619 110 coagulation factor III, tissue factor











Genes with expression patterns similar to F3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. F3 ENSGALG00000005619 110 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 coagulation factor III, tissue factor
2. DAPK1 ENSGALG00000012608 17 1.701 - - - - 0.783 - 0.918 - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
3. TECPR1 ENSGALG00000003507 20 1.602 - - - - 0.841 - 0.761 - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
4. SIK3 ENSGALG00000007144 18 1 - - - - - - 1.000 - - - SIK family kinase 3 [Source:HGNC Symbol;Acc:HGNC:29165]
5. WASF2 ENSGALG00000014012 30 1 - - - - - - 1.000 - - - WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
6. TMEM56 ENSGALG00000005580 10 1 - - - - - - 1.000 - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
7. C1orf74 ENSGALG00000001378 39 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
8. SNTB2 ENSGALG00000027482 44 1 - - - - - - 1.000 - - - syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
9. ENSGALG00000021472 ENSGALG00000021472 2 1 - - - - - - 1.000 - - -
10. KCNJ5 ENSGALG00000001181 11 1 - - - - - - 1.000 - - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
11. TRAF1 ENSGALG00000001583 3 1 - - - - - - 1.000 - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
12. DSEL ENSGALG00000042505 92 1 - - - - - - 1.000 - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
13. COQ2 ENSGALG00000041294 25 1 - - - - - - 1.000 - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
14. GOS2 GOS2 116 0.992 - - - - - - 0.992 - - -
15. FNDC4 ENSGALG00000016507 55 0.969 - - - - - - 0.969 - - - Gallus gallus fibronectin type III domain containing 4 (FNDC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318412]
16. TAF4B ENSGALG00000015122 28 0.93 - - - - - - 0.930 - - - TATA-box binding protein associated factor 4b [Source:HGNC Symbol;Acc:HGNC:11538]
17. ZBTB1 ENSGALG00000011718 27 0.93 - - - - - - 0.930 - - - zinc finger and BTB domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20259]
18. MTMR14 ENSGALG00000006601 1435 0.928 - - - - - - 0.928 - - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
19. YPEL4 ENSGALG00000007374 23 0.925 - - - - - - 0.925 - - - yippee like 4 [Source:HGNC Symbol;Acc:HGNC:18328]
20. OLIG3 ENSGALG00000013862 51 0.924 - - - - - - 0.924 - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
21. VGLL2 ENSGALG00000014917 56 0.923 - - - - - - 0.923 - - - vestigial like family member 2 [Source:NCBI gene;Acc:421735]
22. ZNF516 ENSGALG00000013660 34 0.92 - - - - - - 0.920 - - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
23. CACNA1S 63 0.917 - - - - - - 0.917 - - - calcium voltage-gated channel subunit alpha1 S, transcript variant X4
24. CCDC141 ENSGALG00000020788 606 0.914 - - - - - - 0.914 - - - coiled-coil domain containing 141, transcript variant X5
25. TLR15 ENSGALG00000008166 29 0.913 - - - - - - 0.913 - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
26. AMH ENSGALG00000036346 16 0.911 - - - - - - 0.911 - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
27. YWHAG ENSGALG00000017358 203 0.909 - - - - - - 0.909 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:NCBI gene;Acc:427820]
28. NPPA ENSGALG00000004574 226 0.895 - - - - - - 0.895 - - - natriuretic peptide A [Source:NCBI gene;Acc:395765]
29. OTUD7A ENSGALG00000003802 72 0.887 - - - - - - 0.887 - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
30. GHR_1 ENSGALG00000014855 198 0.885 - - - - - - 0.885 - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
31. ENSGALG00000028328 ENSGALG00000028328 23 0.88 - - - - 0.880 - - - - -
32. CRYBA4 ENSGALG00000005634 56 0.873 - - - - - - 0.873 - - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
33. K123 ENSGALG00000041978 16 0.859 - - - - 0.859 - - - - - K123 protein [Source:NCBI gene;Acc:395873]
34. LMOD2 ENSGALG00000008805 113 0.858 - - - - - - 0.858 - - - leiomodin 2 [Source:NCBI gene;Acc:417751]
35. COL4A4 ENSGALG00000004946 22 0.851 - - - - - - 0.851 - - - collagen type IV alpha 4 chain, transcript variant X3
36. IPPK ENSGALG00000004684 39 0.843 - - - - - - 0.843 - - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
37. DYRK1A ENSGALG00000016053 345 0.842 - - - - - - 0.842 - - - dual specificity tyrosine phosphorylation regulated kinase 1A [Source:NCBI gene;Acc:395233]
38. TAB3 ENSGALG00000016284 40 0.841 - - - - 0.841 - - - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
39. SIX4 ENSGALG00000017389 10 0.841 - - - - 0.841 - - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
40. SLC22A7 ENSGALG00000001661 9 0.841 - - - - 0.841 - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
41. C2orf50 ENSGALG00000046449 17 0.841 - - - - 0.841 - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
42. TMEM132D ENSGALG00000002671 12 0.841 - - - - 0.841 - - - - - transmembrane protein 132D, transcript variant X6
43. RC3H2 ENSGALG00000001253 18 0.841 - - - - 0.841 - - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
44. MYLK3 ENSGALG00000004334 13 0.841 - - - - 0.841 - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
45. VLDL VLDL 13 0.841 - - - - 0.841 - - - - -
46. MILR1 ENSGALG00000046212 7 0.841 - - - - 0.841 - - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
47. HOXA9 ENSGALG00000028983 9298 0.841 - - - - 0.841 - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
48. SNX21 ENSGALG00000006836 5 0.841 - - - - 0.841 - - - - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
49. FADS2 ENSGALG00000007178 116 0.84 - - - - - - 0.840 - - - fatty acid desaturase 2 [Source:NCBI gene;Acc:423122]
50. CTBP2 ENSGALG00000009738 937 0.84 - - - - - - 0.840 - - - C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
51. TMEM156 ENSGALG00000024490 9 0.837 - - - - 0.837 - - - - - transmembrane protein 156, transcript variant X5
52. IL17REL ENSGALG00000008554 5 0.831 - - - - - - 0.831 - - - interleukin 17 receptor E like [Source:HGNC Symbol;Acc:HGNC:33808]
53. CACNA1D ENSGALG00000005332 34 0.831 - - - - - - 0.831 - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
54. ENSGALG00000022155 ENSGALG00000022155 80 0.83 - - - - 0.830 - - - - -
55. FMR1 ENSGALG00000009177 561 0.829 - - - - - - 0.829 - - - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
56. ENSGALG00000013318 ENSGALG00000013318 8 0.827 - - - - 0.827 - - - - -
57. TAPBPL ENSGALG00000014428 39 0.825 - - - - 0.825 - - - - - TAP binding protein like [Source:NCBI gene;Acc:426340]
58. ATP6V1G3 ENSGALG00000002207 151 0.816 - - - - - - 0.816 - - - ATPase H+ transporting V1 subunit G3 [Source:HGNC Symbol;Acc:HGNC:18265]
59. SLAMF8 ENSGALG00000027712 39 0.811 - - - - - - 0.811 - - - SLAM family member 8 [Source:NCBI gene;Acc:768588]
60. DPY19L4 ENSGALG00000039222 30 0.81 - - - - - - 0.810 - - - dpy-19 like 4 [Source:HGNC Symbol;Acc:HGNC:27829]
61. C8G ENSGALG00000040644 443 0.807 - - - - - - - 0.807 - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
62. MCUR1 ENSGALG00000012699 117 0.805 - - - - - - 0.805 - - - mitochondrial calcium uniporter regulator 1 [Source:HGNC Symbol;Acc:HGNC:21097]
63. ST3GAL5 ENSGALG00000033260 19 0.803 - - - - 0.803 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
64. YES1 ENSGALG00000014860 31 0.799 - - - - 0.799 - - - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
65. AXIN2 ENSGALG00000039200 2333 0.797 - - - - - 0.797 - - - - axin 2 [Source:NCBI gene;Acc:395152]
66. HECW1 ENSGALG00000037193 24 0.795 - - - - 0.795 - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
67. NR4A2 ENSGALG00000012538 29 0.793 - - - - - - 0.793 - - - nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]
68. SERPINB5 ENSGALG00000012873 24 0.791 - - - - - - 0.791 - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
69. LGALS2 ENSGALG00000003213 1089 0.791 - - - - 0.791 - - - - - galectin 2, transcript variant X2
70. ENSGALG00000000346 ENSGALG00000000346 130 0.788 - - - - 0.788 - - - - -
71. ENSGALG00000025895 ENSGALG00000025895 69 0.788 - - - - - - 0.788 - - -
72. TMEM52B ENSGALG00000034698 169 0.785 - - - - 0.785 - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
73. RLBP1 ENSGALG00000006676 52 0.781 - - - - - - 0.781 - - - retinaldehyde binding protein 1 [Source:NCBI gene;Acc:415492]
74. ENSGALG00000010054 ENSGALG00000010054 81 0.78 - - - - 0.780 - - - - -
75. CCP110 ENSGALG00000006925 59 0.778 - - - - - - 0.778 - - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
76. LEPREL2 LEPREL2 2046 0.777 - - - - - - - 0.777 - -
77. PRPS2 ENSGALG00000016592 165 0.777 - - - - 0.777 - - - - - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
78. COL8A2 ENSGALG00000002298 27 0.775 - - - - 0.775 - - - - - collagen type VIII alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2216]
79. FAM65C 36 0.77 - - - - - - - 0.770 - - family with sequence similarity 65 member C, transcript variant X29
80. ENSGALG00000027205 ENSGALG00000027205 149 0.767 - - - - - - 0.767 - - -
81. GPR174 ENSGALG00000004111 16 0.765 - - - - 0.765 - - - - - G protein-coupled receptor 174 [Source:NCBI gene;Acc:422146]
82. TMEM132B ENSGALG00000002742 122 0.765 - - - - - - 0.765 - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
83. SRPX2 ENSGALG00000006796 32 0.761 - - - - 0.761 - - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
84. SPHKAP ENSGALG00000002974 80 0.758 - - - - - - 0.758 - - - SPHK1 interactor, AKAP domain containing [Source:NCBI gene;Acc:424789]
85. DNASE1L3 386 0.757 - - - - - - 0.757 - - - deoxyribonuclease 1 like 3
86. ENSGALG00000018358 ENSGALG00000018358 101 0.756 - - - - - - 0.756 - - -
87. POPDC2 ENSGALG00000014988 281 0.756 - - - - - - - 0.756 - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
88. PAX2 ENSGALG00000005689 351 0.755 - - - - 0.755 - - - - - paired box 2 [Source:NCBI gene;Acc:395574]
89. NCX3 NCX3 16 0.754 - - - - 0.754 - - - - -
90. ENSGALG00000021517 ENSGALG00000021517 7 0.754 - - - - 0.754 - - - - -
91. C3ORF64 C3ORF64 49 0.753 - - - - 0.753 - - - - -
92. TMEM35A ENSGALG00000005041 115 0.753 - - - - - - 0.753 - - - transmembrane protein 35A [Source:HGNC Symbol;Acc:HGNC:25864]
93. AEBP2 ENSGALG00000038026 133 0.753 - - - - 0.753 - - - - - AE binding protein 2 [Source:HGNC Symbol;Acc:HGNC:24051]
94. DCLK1 ENSGALG00000041263 40 0.751 - - - - - - - 0.751 - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
95. INPP4B ENSGALG00000009880 358 0.751 - - - - - - - - - 0.751 inositol polyphosphate-4-phosphatase type II B [Source:HGNC Symbol;Acc:HGNC:6075]
96. ENSGALG00000024348 ENSGALG00000024348 254 0.748 - - - - - - 0.748 - - -
97. CNTN1 ENSGALG00000009523 158 0.745 - - - - - - - 0.745 - - contactin 1 [Source:NCBI gene;Acc:417786]
98. INO80 ENSGALG00000008553 846 0.745 - - - - - - 0.745 - - - INO80 complex subunit [Source:NCBI gene;Acc:423210]
99. FUT10 ENSGALG00000015399 1985 0.743 - - - - - - - 0.743 - - fucosyltransferase 10 [Source:NCBI gene;Acc:395073]
100. NR3C2 ENSGALG00000010035 603 0.743 - - - - - - 0.743 - - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]

There are 40 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA