Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ebf1

Gene Name Gene ID Reads Annotation
Ebf1 ENSMUSG00000057098 3112 early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]







Genes with expression patterns similar to Ebf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ebf1 ENSMUSG00000057098 3112 6 1.000 1.000 1.000 1.000 1.000 1.000 early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
2. Elavl3 ENSMUSG00000003410 2830 3.273 0.752 - - 0.874 0.834 0.813 ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
3. Map2 ENSMUSG00000015222 2576 3.083 0.744 0.754 - 0.826 - 0.759 microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
4. Map1b ENSMUSG00000052727 28977 2.474 - - - 0.852 0.810 0.812 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
5. Tubb3 ENSMUSG00000062380 9211 2.434 0.705 - - 0.906 0.823 - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
6. Elavl4 ENSMUSG00000028546 6084 2.412 - 0.708 - 0.882 0.822 - ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
7. St18 ENSMUSG00000033740 408 2.388 - - - 0.734 0.773 0.881 suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
8. Nhlh1 ENSMUSG00000051251 2017 2.379 0.743 - - 0.881 0.755 - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
9. Elavl2 ENSMUSG00000008489 2109 2.369 0.727 - - 0.798 0.844 - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
10. Dpysl5 ENSMUSG00000029168 2096 2.353 - - - 0.829 0.723 0.801 dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
11. Cadm1 ENSMUSG00000032076 15203 2.265 - 0.719 - 0.819 0.727 - cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
12. Apba2 ENSMUSG00000030519 840 2.256 0.716 - - 0.833 0.707 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
13. Neurod4 ENSMUSG00000048015 764 2.251 0.700 - - 0.842 0.709 - neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
14. Basp1 ENSMUSG00000045763 22946 2.245 - 0.715 - 0.784 0.746 - brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
15. Nes ENSMUSG00000004891 8017 2.219 - 0.725 0.704 0.790 - - nestin [Source:MGI Symbol;Acc:MGI:101784]
16. Dcx ENSMUSG00000031285 1733 2.153 0.716 - - 0.708 0.729 - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
17. Trim2 ENSMUSG00000027993 3587 1.739 - - - 0.900 0.839 - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
18. Nrarp ENSMUSG00000078202 1708 1.72 - - - 0.821 - 0.899 Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
19. Tuba1a ENSMUSG00000072235 51129 1.684 - - - 0.881 0.803 - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
20. Ckb ENSMUSG00000001270 8443 1.681 - - - 0.816 - 0.865 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
21. Nhlh2 ENSMUSG00000048540 1310 1.661 - - - 0.858 0.803 - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
22. Cntn2 ENSMUSG00000053024 1798 1.65 - - - 0.853 0.797 - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
23. Pgpep1 ENSMUSG00000056204 2455 1.647 - - - 0.826 0.821 - pyroglutamyl-peptidase I [Source:MGI Symbol;Acc:MGI:1913772]
24. Fam171b ENSMUSG00000048388 2388 1.635 - - - 0.760 - 0.875 family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]
25. 2610017I09Rik 2610017I09Rik 1595 1.629 - - - 0.874 0.755 -
26. Soga3 ENSMUSG00000038916 3972 1.625 - - - 0.854 0.771 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
27. Tmsb4x ENSMUSG00000049775 61014 1.624 - - - 0.877 0.747 - thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
28. Sall3 ENSMUSG00000024565 449 1.621 - - - 0.752 - 0.869 spalt like transcription factor 3 [Source:MGI Symbol;Acc:MGI:109295]
29. Slc1a2 ENSMUSG00000005089 830 1.615 - - - 0.760 - 0.855 solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
30. Tubb2b ENSMUSG00000045136 41060 1.591 - - - 0.881 0.710 - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
31. Tagln3 ENSMUSG00000022658 6054 1.59 - - - 0.861 0.729 - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
32. Gm3764 ENSMUSG00000097156 474 1.583 - - - 0.812 0.771 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
33. Epb4.1l4a Epb4.1l4a 1817 1.575 - - - 0.720 - 0.855
34. Pou3f2 ENSMUSG00000095139 2416 1.572 - - - 0.816 0.756 - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
35. Trp53i11 ENSMUSG00000068735 15944 1.569 - - - 0.859 - 0.710 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
36. Fez1 ENSMUSG00000032118 2537 1.555 - - - 0.832 0.723 - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
37. Myt1 ENSMUSG00000010505 661 1.55 - - - 0.830 0.720 - myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
38. Srgap3 ENSMUSG00000030257 2941 1.539 0.715 - - 0.824 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
39. Kbtbd11 ENSMUSG00000055675 1156 1.528 0.781 0.747 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:MGI Symbol;Acc:MGI:1922151]
40. Hoxc9 ENSMUSG00000036139 4145 1.517 - - - 0.811 0.706 - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
41. Pax6 ENSMUSG00000027168 2751 1.509 - - - 0.779 0.730 - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
42. Lrrn1 ENSMUSG00000034648 683 1.499 0.708 0.791 - - - - leucine rich repeat protein 1, neuronal [Source:MGI Symbol;Acc:MGI:106038]
43. Myh3 ENSMUSG00000020908 1729 1.489 0.769 0.720 - - - - myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
44. Syt13 ENSMUSG00000027220 679 1.489 - - - 0.755 0.734 - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
45. Stmn2 ENSMUSG00000027500 6200 1.489 - - - 0.727 0.762 - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
46. Ebf2 ENSMUSG00000022053 834 1.47 0.723 - 0.747 - - - early B cell factor 2 [Source:MGI Symbol;Acc:MGI:894332]
47. Rundc3a ENSMUSG00000006575 421 1.46 - - - 0.740 0.720 - RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
48. Spock2 ENSMUSG00000058297 1096 1.454 - - - 0.717 0.737 - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
49. Kif21a ENSMUSG00000022629 1223 1.447 - - - 0.740 0.707 - kinesin family member 21A [Source:MGI Symbol;Acc:MGI:109188]
50. Neb ENSMUSG00000026950 948 1.434 0.709 - 0.725 - - - nebulin [Source:MGI Symbol;Acc:MGI:97292]
51. Ppp1r17 ENSMUSG00000002930 374 1.413 - - - 0.708 0.705 - protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
52. Mien1 ENSMUSG00000002580 1326 0.893 - - - - - 0.893 migration and invasion enhancer 1 [Source:MGI Symbol;Acc:MGI:1913678]
53. Gdf11 ENSMUSG00000025352 1515 0.864 - - - - - 0.864 growth differentiation factor 11 [Source:MGI Symbol;Acc:MGI:1338027]
54. Apbb1 ENSMUSG00000037032 1742 0.861 - - - - - 0.861 amyloid beta (A4) precursor protein-binding, family B, member 1 [Source:MGI Symbol;Acc:MGI:107765]
55. Tspan13 ENSMUSG00000020577 1613 0.857 - - - - - 0.857 tetraspanin 13 [Source:MGI Symbol;Acc:MGI:1913359]
56. Pcdha2 ENSMUSG00000104148 246 0.853 - - - - - 0.853 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
57. Acsl6 ENSMUSG00000020333 249 0.843 - - - - - 0.843 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
58. Hes5 ENSMUSG00000048001 1640 0.842 - - - 0.842 - - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
59. Phf21b ENSMUSG00000016624 849 0.838 - - - 0.838 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
60. Tubb4b ENSMUSG00000036752 6429 0.834 - - - - - 0.834 tubulin, beta 4B class IVB [Source:MGI Symbol;Acc:MGI:1915472]
61. Tnnc2 ENSMUSG00000017300 2196 0.834 0.834 - - - - - troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
62. Ildr2 ENSMUSG00000040612 1142 0.834 - - - - - 0.834 immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
63. Miat ENSMUSG00000097767 4258 0.833 - - - 0.833 - - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
64. Actr1a ENSMUSG00000025228 6920 0.832 - - - - - 0.832 ARP1 actin-related protein 1A, centractin alpha [Source:MGI Symbol;Acc:MGI:1858964]
65. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.832 - - - - - 0.832 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
66. Hoxc6 ENSMUSG00000001661 9818 0.829 - - - 0.829 - - homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
67. Wnt16 ENSMUSG00000029671 196 0.829 0.829 - - - - - wingless-type MMTV integration site family, member 16 [Source:MGI Symbol;Acc:MGI:2136018]
68. Lmx1b ENSMUSG00000038765 683 0.828 - - - - - 0.828 LIM homeobox transcription factor 1 beta [Source:MGI Symbol;Acc:MGI:1100513]
69. Ccdc91 ENSMUSG00000030301 664 0.827 - - - - - 0.827 coiled-coil domain containing 91 [Source:MGI Symbol;Acc:MGI:1914265]
70. Trak1 ENSMUSG00000032536 705 0.826 - - - - - 0.826 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
71. Cdc25b ENSMUSG00000027330 1004 0.823 - - - - - 0.823 cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
72. Pdp2 ENSMUSG00000048371 637 0.822 - - - - - 0.822 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
73. AI854517 AI854517 539 0.822 - - - 0.822 - -
74. Lrig1 ENSMUSG00000030029 649 0.821 0.821 - - - - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:MGI Symbol;Acc:MGI:107935]
75. Rnf5 ENSMUSG00000015478 1763 0.821 - - - - - 0.821 ring finger protein 5 [Source:MGI Symbol;Acc:MGI:1860076]
76. Dfna5 492 0.819 - - - - - 0.819 deafness, autosomal dominant 5 (human), transcript variant X3
77. Lhpp ENSMUSG00000030946 365 0.818 - - - - - 0.818 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
78. Chst10 ENSMUSG00000026080 667 0.818 - - - - - 0.818 carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
79. Car2 ENSMUSG00000027562 1176 0.817 - - - - - 0.817 carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
80. Jam2 ENSMUSG00000053062 1020 0.817 - - - 0.817 - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
81. Amd1 ENSMUSG00000075232 1041 0.816 - - - - - 0.816 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
82. Epha5 ENSMUSG00000029245 256 0.815 - - - 0.815 - - Eph receptor A5 [Source:MGI Symbol;Acc:MGI:99654]
83. Ostm1 ENSMUSG00000038280 208 0.815 - - - - - 0.815 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
84. Snx10 ENSMUSG00000038301 2115 0.814 - - - - - 0.814 sorting nexin 10 [Source:MGI Symbol;Acc:MGI:1919232]
85. Pik3c2b ENSMUSG00000026447 424 0.814 - - - - - 0.814 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:MGI Symbol;Acc:MGI:2685045]
86. Zzef1 ENSMUSG00000055670 953 0.814 - - - - - 0.814 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
87. Ufsp1 ENSMUSG00000051502 251 0.814 - - - - - 0.814 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
88. Fam131a ENSMUSG00000050821 113 0.814 - - - - - 0.814 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
89. Draxin ENSMUSG00000029005 726 0.813 - - - - - 0.813 dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
90. Pfkfb2 ENSMUSG00000026409 480 0.813 - - - - - 0.813 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
91. Dmrt2 ENSMUSG00000048138 949 0.813 0.813 - - - - - doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
92. Acp2 ENSMUSG00000002103 1293 0.812 - - - - - 0.812 acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
93. Hes3 ENSMUSG00000028946 73 0.812 - - - - - 0.812 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
94. Lgr5 ENSMUSG00000020140 516 0.812 - - - - - 0.812 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
95. Mcm8 ENSMUSG00000027353 1598 0.811 - - - - - 0.811 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
96. 9130023H24Rik ENSMUSG00000062944 258 0.811 - - - - - 0.811 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
97. Cish ENSMUSG00000032578 239 0.811 - - - - - 0.811 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
98. Il17d ENSMUSG00000050222 119 0.81 - - - - - 0.810 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
99. Gm14286 ENSMUSG00000087445 166 0.81 - - - - - 0.810 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
100. Onecut2 ENSMUSG00000045991 2334 0.81 0.810 - - - - - one cut domain, family member 2 [Source:MGI Symbol;Acc:MGI:1891408]

There are 356 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA