Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EXOSC9

Gene Name Gene ID Reads Annotation
EXOSC9 ENSGALG00000011884 3403 exosome component 9 [Source:NCBI gene;Acc:619530]











Genes with expression patterns similar to EXOSC9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EXOSC9 ENSGALG00000011884 3403 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 exosome component 9 [Source:NCBI gene;Acc:619530]
2. FANCL ENSGALG00000030022 7423 1.726 - - - - - - 0.874 0.852 - - FA complementation group L [Source:NCBI gene;Acc:421202]
3. CHTF8 ENSGALG00000000632 7230 1.566 - - - - - - 0.821 - - 0.745 chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
4. RRP1B ENSGALG00000035696 12309 1.563 - - - - - - 0.762 0.801 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
5. NDUFB3 ENSGALG00000008239 15511 1.556 - - - - - - 0.813 - - 0.743 NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
6. DAD1 ENSGALG00000035626 32604 1.556 - - - - - - 0.756 0.800 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
7. NDUFA12 ENSGALG00000011325 19807 1.515 - - - - - - 0.769 0.746 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
8. RFC1 ENSGALG00000014298 6516 1.514 - - - - - - 0.743 0.771 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
9. SPDL1 ENSGALG00000001942 4403 1.503 - - - - - - 0.764 0.739 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
10. TAF2 ENSGALG00000043193 6311 1.49 - - - - - - 0.788 0.702 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
11. KIF18A ENSGALG00000012160 2612 1.477 - - - - - - 0.735 0.742 - - kinesin family member 18A [Source:NCBI gene;Acc:421607]
12. PTPMT1 ENSGALG00000008091 6160 1.456 - - - - - - 0.721 0.735 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
13. COBRA1 COBRA1 4600 1.452 - - - - - - 0.736 0.716 - -
14. BMS1 ENSGALG00000002624 8339 1.445 - - - - - - 0.702 - - 0.743 BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
15. MRPL47 ENSGALG00000013759 9044 1.44 - - - - - - 0.735 0.705 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
16. UBE2V1 ENSGALG00000008015 17947 0.9 - - - - - - 0.900 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
17. SPINZ SPINZ 10341 0.875 - - - - - - 0.875 - - -
18. TSG101 ENSGALG00000006312 8289 0.855 - - - - - - 0.855 - - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
19. HDDC2 ENSGALG00000014841 7674 0.851 - - - - - - 0.851 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
20. P4HA1 ENSGALG00000004325 4703 0.847 - - - - - - 0.847 - - - prolyl 4-hydroxylase subunit alpha 1 [Source:NCBI gene;Acc:423704]
21. GALNT1 ENSGALG00000013135 13583 0.846 - - - - - - 0.846 - - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
22. CCNH ENSGALG00000015641 8051 0.839 - - - - - - 0.839 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
23. DDX20 ENSGALG00000001504 3367 0.837 - - - - - - - 0.837 - - DEAD-box helicase 20 [Source:HGNC Symbol;Acc:HGNC:2743]
24. MED21 ENSGALG00000027435 5766 0.836 - - - - - - 0.836 - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
25. RABGGTB ENSGALG00000011388 11654 0.833 - - - - - - 0.833 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
26. ECI1 ENSGALG00000031563 11326 0.832 - - - - - - 0.832 - - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
27. SCFD1 ENSGALG00000009916 5756 0.83 - - - - - - - 0.830 - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
28. CTDP1 ENSGALG00000031461 4818 0.824 - - - - - - 0.824 - - - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
29. MRPL30 ENSGALG00000016760 16965 0.823 - - - - - - 0.823 - - - mitochondrial ribosomal protein L30
30. gga-mir-1772 ENSGALG00000025300 2892 0.821 - - - - - - 0.821 - - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
31. GOLGA7 ENSGALG00000003483 26525 0.82 - - - - - - 0.820 - - - golgin A7 [Source:NCBI gene;Acc:426787]
32. RIOK2 ENSGALG00000015288 6280 0.82 - - - - - - 0.820 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
33. KIAA0020 KIAA0020 14353 0.819 - - - - - - 0.819 - - -
34. CHMP3 ENSGALG00000015805 11581 0.818 - - - - - - 0.818 - - - charged multivesicular body protein 3
35. KIF2C ENSGALG00000010120 8999 0.818 - - - - - - 0.818 - - - kinesin family member 2C, transcript variant X1
36. DDX47 ENSGALG00000011794 4255 0.818 - - - - - - 0.818 - - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
37. TRAPPC6B ENSGALG00000010157 7567 0.817 - - - - - - 0.817 - - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
38. CUL3 ENSGALG00000005108 9571 0.815 - - - - - - 0.815 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
39. SPTLC1 ENSGALG00000013493 3918 0.814 - - - - - - 0.814 - - - serine palmitoyltransferase long chain base subunit 1 [Source:HGNC Symbol;Acc:HGNC:11277]
40. PSMD3 ENSGALG00000033162 25615 0.814 - - - - - - 0.814 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
41. ARID2 ENSGALG00000033074 3461 0.814 - - - - - - 0.814 - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
42. NIP7 ENSGALG00000000650 23932 0.813 - - - - - - - 0.813 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
43. OSTC ENSGALG00000010526 19422 0.813 - - - - - - 0.813 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
44. DMTF1 ENSGALG00000030844 3584 0.811 - - - - - - 0.811 - - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
45. SEC22A ENSGALG00000011697 7981 0.811 - - - - - - - 0.811 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
46. CTNNBL1 ENSGALG00000006817 6765 0.809 - - - - - - - 0.809 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
47. CBLL1 ENSGALG00000038981 6725 0.808 - - - - - - 0.808 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
48. NDUFAF2 ENSGALG00000027564 7302 0.808 - - - - - - 0.808 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
49. BLMH ENSGALG00000004259 36907 0.807 - - - - - - - 0.807 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
50. MARK1 ENSGALG00000009483 10350 0.806 - - - - - - 0.806 - - - microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
51. VATB VATB 13756 0.805 - - - - - - 0.805 - - -
52. LLPH ENSGALG00000019358 20976 0.805 - - - - - - 0.805 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
53. ACRC ACRC 2547 0.801 - - - - - - 0.801 - - -
54. CRNKL1 ENSGALG00000008429 7280 0.799 - - - - - - 0.799 - - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
55. SUCLG2 ENSGALG00000007652 9688 0.798 - - - - - - 0.798 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
56. EDNRB ENSGALG00000016912 2851 0.798 - - - - - - 0.798 - - - endothelin receptor type B [Source:NCBI gene;Acc:408082]
57. SRM ENSGALG00000003039 8331 0.797 - - - - - - 0.797 - - - spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
58. TMED2 ENSGALG00000003307 20704 0.796 - - - - - - 0.796 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
59. USE1 ENSGALG00000003703 4680 0.795 - - - - - - - 0.795 - - unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
60. TNFAIP8L1 ENSGALG00000004266 12611 0.795 - - - - - - 0.795 - - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
61. CRLF3 ENSGALG00000003284 6002 0.794 - - - - - - 0.794 - - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
62. CNOT8 ENSGALG00000003950 8271 0.793 - - - - - - 0.793 - - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
63. FCF1 ENSGALG00000010275 24928 0.793 - - - - - - 0.793 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
64. PARP1 ENSGALG00000009228 39433 0.793 - - - - - - 0.793 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
65. ENSGALG00000005870 ENSGALG00000005870 4343 0.792 - - - - - - - 0.792 - -
66. TXNL1 ENSGALG00000033862 13899 0.791 - - - - - - 0.791 - - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
67. PAK1IP1 ENSGALG00000012724 10907 0.791 - - - - - - - 0.791 - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
68. ADRM1 ENSGALG00000005200 5417 0.791 - - - - - - 0.791 - - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
69. ZNF593 ENSGALG00000000542 79105 0.791 - - - - - - 0.791 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
70. MRPL20 ENSGALG00000001542 28764 0.791 - - - - - - 0.791 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
71. DYNC2H1 ENSGALG00000041814 1770 0.79 - - - - - - 0.790 - - - dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
72. EBNA1BP2 ENSGALG00000009045 17453 0.79 - - - - - - 0.790 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
73. CENPW ENSGALG00000027454 7517 0.79 - - - - - - 0.790 - - - centromere protein W [Source:NCBI gene;Acc:421716]
74. DCTD ENSGALG00000010674 8396 0.79 - - - - - - - 0.790 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
75. CLNS1A ENSGALG00000008574 25675 0.79 - - - - - - 0.790 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
76. GABPB1 ENSGALG00000023440 5676 0.79 - - - - - - 0.790 - - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
77. IARS ENSGALG00000004813 12936 0.788 - - - - - - 0.788 - - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
78. AIMP2 ENSGALG00000003400 12655 0.788 - - - - - - 0.788 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
79. METTL23 ENSGALG00000001790 7906 0.787 - - - - - - 0.787 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
80. RABL3 ENSGALG00000014949 2850 0.786 - - - - - - 0.786 - - - RAB, member of RAS oncogene family like 3 [Source:NCBI gene;Acc:418329]
81. PFDN1 ENSGALG00000000946 18822 0.786 - - - - - - 0.786 - - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
82. POLR1E ENSGALG00000005395 8953 0.785 - - - - - - 0.785 - - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
83. RBM27 ENSGALG00000007516 3909 0.785 - - - - - - 0.785 - - - RNA binding motif protein 27, transcript variant X3
84. DSCR3 3583 0.784 - - - - - - 0.784 - - - DSCR3 arrestin fold containing, transcript variant X1
85. MSANTD4 ENSGALG00000017177 3306 0.784 - - - - - - 0.784 - - - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
86. YRDC ENSGALG00000029001 6529 0.784 - - - - - - 0.784 - - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
87. YWHAZ ENSGALG00000031387 84985 0.784 - - - - - - 0.784 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
88. EIF5B ENSGALG00000016764 30681 0.784 - - - - - - - 0.784 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
89. NAA20 ENSGALG00000012587 11349 0.784 - - - - - - 0.784 - - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
90. FXR1 ENSGALG00000008864 10250 0.783 - - - - - - 0.783 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
91. NDUFS1 ENSGALG00000008606 7898 0.783 - - - - - - 0.783 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
92. C10orf88 ENSGALG00000000011 6026 0.783 - - - - - - - 0.783 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
93. NUP85 ENSGALG00000007974 21249 0.783 - - - - - - 0.783 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
94. TAB1 ENSGALG00000012150 4864 0.782 - - - - - - 0.782 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [Source:NCBI gene;Acc:418014]
95. PTTG1 17936 0.782 - - - - - - 0.782 - - - pituitary tumor-transforming 1, transcript variant X1
96. DRG1 ENSGALG00000006921 10791 0.781 - - - - - - 0.781 - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
97. RASA2 ENSGALG00000002850 2231 0.781 - - - - - - 0.781 - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
98. KLHDC4 ENSGALG00000037315 9828 0.781 - - - - - - 0.781 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
99. ENSGALG00000001861 ENSGALG00000001861 10150 0.78 - - - - - - - 0.780 - -
100. PGAM5 ENSGALG00000002137 7700 0.779 - - - - - - 0.779 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]

There are 398 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA