Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for EXOSC3

Gene Name Gene ID Reads Annotation
EXOSC3 ENSGALG00000002426 7255 exosome component 3 [Source:NCBI gene;Acc:423626]











Genes with expression patterns similar to EXOSC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EXOSC3 ENSGALG00000002426 7255 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 exosome component 3 [Source:NCBI gene;Acc:423626]
2. ZNF318 ENSGALG00000034040 1758 1.891 - - - - 0.980 - - 0.911 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
3. NQO2 ENSGALG00000025747 2287 1.88 - - - - 0.975 - - 0.905 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
4. GTF2H3 ENSGALG00000023682 9914 1.85 - - - - 0.947 - - 0.903 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
5. RPAP3 ENSGALG00000009743 3380 1.72 - - - - 0.973 - 0.747 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
6. CYB5R2 ENSGALG00000032372 7967 1.714 - - - - 0.953 - 0.761 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
7. MYBBP1A ENSGALG00000001363 10331 1.682 - - - - 0.972 - 0.710 - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
8. AMACR ENSGALG00000003326 2657 1.68 - - - - - - 0.778 0.902 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
9. COG6 ENSGALG00000017035 2777 1.679 - - - - 0.971 - 0.708 - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
10. SPSB1 ENSGALG00000002506 2205 1.675 - - - - 0.972 - 0.703 - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
11. RUVBL1 ENSGALG00000005931 9379 1.65 - - - - 0.946 - 0.704 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
12. TTC37 ENSGALG00000014670 5715 1.644 - - - - 0.943 - 0.701 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
13. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 1.627 - - - - - - 0.730 0.897 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
14. ENSGALG00000009771 ENSGALG00000009771 10273 1.626 - - - - 0.884 - 0.742 - - -
15. EDNRA ENSGALG00000010013 2472 1.606 - - - - - - 0.704 0.902 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
16. METAP2 ENSGALG00000011377 16311 1.591 - - - - 0.870 - 0.721 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
17. ILF2 ENSGALG00000011570 23050 1.576 - - - - 0.843 - 0.733 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
18. MBNL3 ENSGALG00000032045 10980 1.571 - - - - - - 0.774 0.797 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
19. NDUFAF2 ENSGALG00000027564 7302 1.55 - - - - 0.808 - 0.742 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
20. TSPAN3 ENSGALG00000002774 28811 1.471 - - - - 0.756 - - 0.715 - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
21. RAB11B ENSGALG00000000613 20696 1.433 - - 0.717 - - - 0.716 - - - RAB11B, member RAS oncogene family [Source:NCBI gene;Acc:420063]
22. TMEM115 ENSGALG00000026965 13050 1.423 - - - - - 0.712 0.711 - - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
23. ZBTB8OS ENSGALG00000003517 2436 0.984 - - - - 0.984 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
24. FANCM ENSGALG00000031182 1030 0.981 - - - - 0.981 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
25. AP1S3 ENSGALG00000005171 2981 0.981 - - - - 0.981 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
26. DRD2 ENSGALG00000007794 399 0.981 - - - - 0.981 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
27. REXO5 ENSGALG00000002239 2466 0.981 - - - - 0.981 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
28. ALDH18A1 ENSGALG00000034655 3038 0.981 - - - - 0.981 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
29. KLF3 ENSGALG00000041717 2787 0.98 - - - - 0.980 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
30. DNAJA1 ENSGALG00000023066 3820 0.98 - - - - 0.980 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
31. RAB23 ENSGALG00000016279 597 0.98 - - - - 0.980 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
32. LOC770492 ENSGALG00000027778 695 0.98 - - - - 0.980 - - - - - ras-related and estrogen-regulated growth inhibitor-like
33. PRKCD ENSGALG00000002016 1476 0.98 - - - - 0.980 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
34. ERICH1 ENSGALG00000031021 1495 0.98 - - - - 0.980 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
35. TEL TEL 1231 0.98 - - - - 0.980 - - - - -
36. ADPGK ENSGALG00000001788 208 0.979 - - - - 0.979 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
37. DAP3 ENSGALG00000019796 13278 0.979 - - - - 0.979 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
38. CALCA CALCA 682 0.979 - - - - 0.979 - - - - -
39. BBS2 ENSGALG00000042415 1816 0.978 - - - - 0.978 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
40. TMEM97 ENSGALG00000005702 2037 0.978 - - - - 0.978 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
41. ITPA ENSGALG00000003250 7722 0.978 - - - - 0.978 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
42. IFT172 ENSGALG00000016509 1226 0.978 - - - - 0.978 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
43. CRCP ENSGALG00000002587 8809 0.978 - - - - 0.978 - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
44. TMEM203 ENSGALG00000008925 3033 0.978 - - - - 0.978 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
45. IL4RA IL4RA 1237 0.978 - - - - 0.978 - - - - -
46. OGFOD3 ENSGALG00000001618 2438 0.978 - - - - 0.978 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
47. COQ3 ENSGALG00000015486 3508 0.978 - - - - 0.978 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
48. FZD6 ENSGALG00000030626 3336 0.978 - - - - 0.978 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
49. TCERG1L ENSGALG00000010470 490 0.977 - - - - 0.977 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
50. ARPP21 ENSGALG00000043240 2403 0.977 - - - - 0.977 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
51. Sep-11 Sep-11 2005 0.977 - - - - 0.977 - - - - -
52. TMEM184C ENSGALG00000010019 7856 0.976 - - - - 0.976 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
53. RNF207 2949 0.976 - - - - 0.976 - - - - - ring finger protein 207, transcript variant X1
54. SLC25A15 ENSGALG00000017032 6773 0.976 - - - - 0.976 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
55. METTL25 1538 0.976 - - - - 0.976 - - - - - methyltransferase like 25, transcript variant X1
56. SMC6 ENSGALG00000016467 3321 0.974 - - - - 0.974 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
57. VCPKMT ENSGALG00000012269 2107 0.974 - - - - 0.974 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
58. DLGAP5 ENSGALG00000012165 2406 0.974 - - - - 0.974 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
59. TMX4 ENSGALG00000028587 3513 0.974 - - - - 0.974 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
60. MICALL1 ENSGALG00000012265 3753 0.974 - - - - 0.974 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
61. CGT CGT 948 0.973 - - - - 0.973 - - - - -
62. PDHB ENSGALG00000029576 12254 0.973 - - - - 0.973 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
63. PLS3 ENSGALG00000005930 12625 0.973 - - - - 0.973 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
64. DNAJC25 ENSGALG00000015684 4554 0.972 - - - - 0.972 - - - - - DnaJ heat shock protein family (Hsp40) member C25
65. GALNTL4 GALNTL4 3548 0.971 - - - - 0.971 - - - - -
66. ATAD5 ENSGALG00000003294 4830 0.971 - - - - 0.971 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
67. RASA2 ENSGALG00000002850 2231 0.971 - - - - 0.971 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
68. ZZZ3 ENSGALG00000008988 3132 0.971 - - - - 0.971 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
69. TAF13 ENSGALG00000015185 11410 0.971 - - - - 0.971 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
70. ROCK1 ENSGALG00000014922 4020 0.971 - - - - 0.971 - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
71. GLI2 ENSGALG00000011630 3347 0.969 - - - - 0.969 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
72. ATP5J 14451 0.969 - - - - 0.969 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
73. PLA2G12A ENSGALG00000012185 5261 0.969 - - - - 0.969 - - - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
74. HMGN1 ENSGALG00000016067 17375 0.967 - - - - 0.967 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
75. ATPAF1 ENSGALG00000010444 3677 0.965 - - - - 0.965 - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
76. DCAF12 ENSGALG00000005800 6419 0.965 - - - - 0.965 - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
77. KIAA1524 ENSGALG00000015360 3527 0.965 - - - - 0.965 - - - - - KIAA1524 [Source:NCBI gene;Acc:418410]
78. DHX33 ENSGALG00000001630 7783 0.965 - - - - 0.965 - - - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
79. SLC9A3R2 ENSGALG00000005608 4220 0.965 - - - - 0.965 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
80. MAPKAPK2 ENSGALG00000000883 6174 0.965 - - - - 0.965 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
81. PEX2 ENSGALG00000035752 4427 0.965 - - - - 0.965 - - - - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
82. LARP7 ENSGALG00000012048 8393 0.964 - - - - 0.964 - - - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
83. CCDC58 ENSGALG00000014413 9022 0.964 - - - - 0.964 - - - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
84. WWP2 ENSGALG00000000699 5040 0.963 - - - - 0.963 - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
85. POLR1B ENSGALG00000032273 3845 0.962 - - - - 0.962 - - - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
86. ROMO1 ENSGALG00000027416 9560 0.962 - - - - 0.962 - - - - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
87. THOC1 ENSGALG00000014915 5846 0.962 - - - - 0.962 - - - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
88. TIMM10 ENSGALG00000004845 31395 0.962 - - - - 0.962 - - - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
89. DAP ENSGALG00000013002 6815 0.962 - - - - 0.962 - - - - - death associated protein [Source:NCBI gene;Acc:420923]
90. MPRIP ENSGALG00000004798 6700 0.961 - - - - 0.961 - - - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
91. SLC25A24 ENSGALG00000001938 3671 0.96 - - - - 0.960 - - - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
92. TXNDC11 ENSGALG00000003154 2224 0.96 - - - - 0.960 - - - - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
93. C19orf70 ENSGALG00000026847 19315 0.96 - - - - 0.960 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
94. MDFIC ENSGALG00000026838 3881 0.959 - - - - 0.959 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
95. UTP3 ENSGALG00000011553 8814 0.958 - - - - 0.958 - - - - - UTP3, small subunit processome component homolog (S. cerevisiae)
96. ZWILCH ENSGALG00000007736 4939 0.958 - - - - 0.958 - - - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
97. SEC22B ENSGALG00000039704 16080 0.958 - - - - 0.958 - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
98. NUP188 ENSGALG00000043394 9288 0.958 - - - - 0.958 - - - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
99. C1H21ORF33 ENSGALG00000019171 8910 0.957 - - - - 0.957 - - - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
100. ROR2 ENSGALG00000015208 1323 0.956 - - - - 0.956 - - - - - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]

There are 428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA