Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EXD3

Gene Name Gene ID Reads Annotation
EXD3 30 exonuclease 3'-5' domain containing 3, transcript variant X23











Genes with expression patterns similar to EXD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EXD3 30 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 exonuclease 3'-5' domain containing 3, transcript variant X23
2. IFNAR1 ENSGALG00000030363 22 1.663 - - - 0.810 - 0.853 - - - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
3. CREB3 ENSGALG00000002523 23 1 - - - - 1.000 - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
4. HOXD11 ENSGALG00000039629 658 1 - - - - 1.000 - - - - - homeobox D11 [Source:NCBI gene;Acc:395328]
5. RP1L1 12 1 - - - - 1.000 - - - - - retinitis pigmentosa 1 like 1
6. CHRNA4 ENSGALG00000005801 5 1 - - - - 1.000 - - - - - cholinergic receptor nicotinic alpha 4 subunit [Source:NCBI gene;Acc:395606]
7. TRAIL-LIKE ENSGALG00000007240 8 1 - - - - 1.000 - - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
8. TNFRSF8 ENSGALG00000039741 6 1 - - - - 1.000 - - - - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
9. CD8A ENSGALG00000015900, ENSGALG00000038559 1 1 - - - - 1.000 - - - - - Gallus gallus CD8a molecule (CD8A), mRNA. [Source:RefSeq mRNA;Acc:NM_001048080]
10. PANK3 ENSGALG00000001895 11 1 - - - - 1.000 - - - - - pantothenate kinase 3 [Source:HGNC Symbol;Acc:HGNC:19365]
11. ZBTB33 ENSGALG00000008611 15 0.958 - - - - 0.958 - - - - - zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
12. FAM20C ENSGALG00000038768 31 0.941 - - - - 0.941 - - - - - FAM20C, golgi associated secretory pathway kinase [Source:HGNC Symbol;Acc:HGNC:22140]
13. CD1A1 CD1A1 12 0.935 - - - - - 0.935 - - - -
14. IL8 ENSGALG00000026098 16 0.931 - - - - 0.931 - - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
15. AP3M1 ENSGALG00000005070 712 0.899 - - - - 0.899 - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
16. CDHR3 ENSGALG00000008109 71 0.899 - - - - - - 0.899 - - - cadherin related family member 3 [Source:HGNC Symbol;Acc:HGNC:26308]
17. SYT9 ENSGALG00000005265 34 0.887 - - - - - - - 0.887 - - synaptotagmin 9 [Source:HGNC Symbol;Acc:HGNC:19265]
18. KIAA1549L ENSGALG00000012020 33 0.885 - - - - - 0.885 - - - - KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
19. CISH ENSGALG00000002260 1 0.869 - - - - - - - - - 0.869 cytokine inducible SH2 containing protein [Source:NCBI gene;Acc:395335]
20. SLC26A4 ENSGALG00000007998 2 0.869 - - - - - - - - - 0.869 solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
21. XDH ENSGALG00000008701 10 0.869 - - - - - - - - - 0.869 xanthine dehydrogenase [Source:NCBI gene;Acc:396025]
22. ANKFN1 ENSGALG00000003105 15 0.869 - - - - - - - - - 0.869 ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
23. FOXO3 ENSGALG00000015297 1 0.869 - - - - - - - - - 0.869 forkhead box O3 [Source:HGNC Symbol;Acc:HGNC:3821]
24. SLC46A2 ENSGALG00000027345 1 0.869 - - - - - - - - - 0.869 solute carrier family 46 member 2 [Source:HGNC Symbol;Acc:HGNC:16055]
25. OLIG3 ENSGALG00000013862 51 0.869 - - - - - - - - - 0.869 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
26. IRX4 ENSGALG00000022896 18 0.869 - - - - - - - - - 0.869 iroquois homeobox 4 [Source:NCBI gene;Acc:373974]
27. PID1 ENSGALG00000002963 2 0.869 - - - - - - - - - 0.869 phosphotyrosine interaction domain containing 1 [Source:NCBI gene;Acc:424787]
28. VANGL1 ENSGALG00000015025 67 0.869 - - - - - - - - - 0.869 VANGL planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:15512]
29. ENSGALG00000023464 ENSGALG00000023464 3 0.869 - - - - - - - - - 0.869
30. RND2 ENSGALG00000002804 9 0.869 - - - - - - - - - 0.869 Rho family GTPase 2 [Source:NCBI gene;Acc:428307]
31. TMEM204 ENSGALG00000029047 8 0.869 - - - - - - - - - 0.869 transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
32. ENSGALG00000019202 ENSGALG00000019202 9 0.869 - - - - - - - - - 0.869
33. CMTR2 ENSGALG00000002356 3 0.869 - - - - - - - - - 0.869 cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
34. KCNU1 ENSGALG00000045668 2 0.869 - - - - - - - - - 0.869 potassium calcium-activated channel subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:18867]
35. PLCD3 ENSGALG00000045212 5 0.869 - - - - - - - - - 0.869 phospholipase C delta 3 [Source:HGNC Symbol;Acc:HGNC:9061]
36. PTHRP PTHRP 8 0.869 - - - - - - - - - 0.869
37. FZD10 ENSGALG00000042003 11 0.869 - - - - - - - - - 0.869 frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
38. CBLN1 ENSGALG00000042664 15 0.869 - - - - - - - - - 0.869 cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
39. UNC5D ENSGALG00000001608 4 0.869 - - - - - - - - - 0.869 unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
40. YTHDF3 ENSGALG00000039774 170 0.863 - - - - - 0.863 - - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
41. PROK2 ENSGALG00000007785 55 0.862 - - - 0.862 - - - - - - prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
42. ENSGALG00000021706 ENSGALG00000021706 186 0.862 - - - - - - - 0.862 - -
43. FAM129B ENSGALG00000023872 84 0.857 - - - - - - - 0.857 - - family with sequence similarity 129 member B [Source:HGNC Symbol;Acc:HGNC:25282]
44. SLC30A7 ENSGALG00000020879 92 0.856 - - - - - 0.856 - - - - solute carrier family 30 member 7 [Source:NCBI gene;Acc:424464]
45. CCSER1 ENSGALG00000039674 14 0.853 - - - - - 0.853 - - - - coiled-coil serine rich protein 1, transcript variant X3
46. gga-mir-1647 ENSGALG00000025382 4 0.853 - - - - - 0.853 - - - - gga-mir-1647 [Source:miRBase;Acc:MI0007379]
47. ENSGALG00000011658 ENSGALG00000011658 1 0.853 - - - - - 0.853 - - - -
48. GJA10 ENSGALG00000015606 1 0.853 - - - - - 0.853 - - - - gap junction protein, alpha 10, 62kDa
49. SNORD65 SNORD65 3 0.853 - - - - - 0.853 - - - -
50. GPR22 ENSGALG00000008032 5 0.853 - - - - - 0.853 - - - - G protein-coupled receptor 22, transcript variant X1
51. SLC2A1 ENSGALG00000004889 10 0.853 - - - - - 0.853 - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
52. CYTH4 ENSGALG00000012454 12 0.853 - - - - - 0.853 - - - - cytohesin 4 [Source:NCBI gene;Acc:418043]
53. XG ENSGALG00000029002 17 0.853 - - - - - 0.853 - - - - Xg blood group
54. DOLK ENSGALG00000026007 6 0.853 - - - - - 0.853 - - - - dolichol kinase [Source:NCBI gene;Acc:417199]
55. SFMBT1 ENSGALG00000001753 10 0.853 - - - - - 0.853 - - - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
56. ENSGALG00000026109 ENSGALG00000026109 2 0.853 - - - - - 0.853 - - - -
57. MAPKBP1 2 0.853 - - - - - 0.853 - - - - mitogen-activated protein kinase binding protein 1, transcript variant X3
58. MFSD8 ENSGALG00000010199 11 0.853 - - - - - 0.853 - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
59. BTBD3 ENSGALG00000009028 45 0.853 - - - - - 0.853 - - - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
60. CYP11A1 ENSGALG00000034982 1 0.853 - - - - - 0.853 - - - - cytochrome P450 family 11 subfamily A member 1 [Source:NCBI gene;Acc:414838]
61. SCTR ENSGALG00000012106 49 0.853 - - - - - 0.853 - - - - secretin receptor [Source:NCBI gene;Acc:770943]
62. RNF6 ENSGALG00000017105 11 0.853 - - - - - 0.853 - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
63. NOX5 ENSGALG00000008063 19 0.853 - - - - - 0.853 - - - - NADPH oxidase 5 [Source:NCBI gene;Acc:415565]
64. ADAMTSL3 ENSGALG00000006104 57 0.853 - - - - - 0.853 - - - - ADAMTS like 3 [Source:HGNC Symbol;Acc:HGNC:14633]
65. ISPD ENSGALG00000010795 7 0.853 - - - - - 0.853 - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
66. ESRRB ENSGALG00000041775 43 0.853 - - - - - 0.853 - - - - estrogen related receptor beta [Source:HGNC Symbol;Acc:HGNC:3473]
67. TDRKH ENSGALG00000031812 1 0.853 - - - - - 0.853 - - - - tudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]
68. ENSGALG00000027597 ENSGALG00000027597 13 0.853 - - - - - 0.853 - - - -
69. SLC39A8 ENSGALG00000012298 9 0.853 - - - - - 0.853 - - - - solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
70. ENSGALG00000025801 ENSGALG00000025801 5 0.853 - - - - - 0.853 - - - -
71. KLRD1 ENSGALG00000014722 27 0.848 - - - - - 0.848 - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
72. ENSGALG00000004223 ENSGALG00000004223 7 0.848 - - - - - 0.848 - - - -
73. C14orf166B C14orf166B 4 0.848 - - - - - 0.848 - - - -
74. BKJ ENSGALG00000030478, ENSGALG00000031115, ENSGALG00000032838, ENSGALG00000035763, ENSGALG00000038477, ENSGALG00000039526, ENSGALG00000041545 14 0.848 - - - - - 0.848 - - - - beta-keratin related protein, transcript variant X1
75. ENSGALG00000027203 ENSGALG00000027203 2 0.844 - - - - - - - 0.844 - -
76. POMGNT1 ENSGALG00000010351 3 0.844 - - - - - - - 0.844 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
77. PACRG ENSGALG00000011560 67 0.844 - - - - - - - 0.844 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
78. GUCY1B3 29 0.844 - - - - - - - 0.844 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
79. RUNX1 ENSGALG00000016022 2 0.844 - - - - - - - 0.844 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
80. TTC29 ENSGALG00000010009 4 0.844 - - - - - - - 0.844 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
81. ENSGALG00000014888 ENSGALG00000014888 3 0.844 - - - - - - - 0.844 - -
82. ADPRH ENSGALG00000015473 7 0.844 - - - - - - - 0.844 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
83. PGF ENSGALG00000026557 33 0.842 - - - - - - - 0.842 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
84. FRMPD3 ENSGALG00000028975 3 0.842 - - - - - - - 0.842 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
85. DENND2A ENSGALG00000012857 350 0.842 - - - - - - - 0.842 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
86. NRG3 ENSGALG00000042812 10 0.842 - - - - - - - 0.842 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
87. BDKRB2 ENSGALG00000011080 12 0.84 - - - - - - - 0.840 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
88. TSPAN10 ENSGALG00000004525 6 0.839 - - - - - - - 0.839 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
89. ENSGALG00000027412 ENSGALG00000027412 202 0.838 - - - - - 0.838 - - - -
90. FLNB ENSGALG00000005678 68 0.838 - - - - - 0.838 - - - - filamin B [Source:NCBI gene;Acc:378913]
91. MLANA ENSGALG00000019756 8 0.833 - - - - - - - - - 0.833 melan-A [Source:HGNC Symbol;Acc:HGNC:7124]
92. ENSGALG00000015793 ENSGALG00000015793 12 0.831 - - - 0.831 - - - - - -
93. EXOC6 ENSGALG00000006763 119 0.828 - - - - - - - 0.828 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
94. ENSGALG00000002020 ENSGALG00000002020 183 0.827 - - - - - 0.827 - - - -
95. C12orf50 ENSGALG00000045093 9 0.825 - - - - - - - 0.825 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
96. SAMSN1 ENSGALG00000040926 88 0.825 - - - - - 0.825 - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
97. SLC24A4 ENSGALG00000010793 238 0.821 - - - - 0.821 - - - - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
98. ENSGALG00000028258 ENSGALG00000028258 67 0.817 - - - - - - - 0.817 - -
99. BAI1 BAI1 235 0.816 - - - - - - - 0.816 - -
100. SCUBE3 ENSGALG00000002675 12 0.816 - - - - - - - 0.816 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]

There are 107 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA