Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for EXD1

Gene Name Gene ID Reads Annotation
EXD1 ENSDARG00000098669 27 exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]










Genes with expression patterns similar to EXD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. EXD1 ENSDARG00000098669 27 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
2. mcm5_1 ENSDARG00000019507 10 2.941 - 0.941 - 1.000 - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
3. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 2.729 - 0.941 - - - - 1.000 0.788 - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
4. si:ch211-274p24.4 ENSDARG00000087088 36 2.457 0.823 - - - 0.729 0.905 - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
5. dusp3b ENSDARG00000060130 3 2 - - - - - - 1.000 - 1.000 dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
6. ZNRF4 ZNRF4 16 2 - - - - - 1.000 - - 1.000
7. cd44a ENSDARG00000087863 4 2 - - - 1.000 - - 1.000 - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
8. PEG3_35 PEG3_35 52 2 - - - - - 1.000 1.000 - -
9. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 2 - - - - - 1.000 1.000 - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
10. hcrt ENSDARG00000070932 4 2 - - - 1.000 - - 1.000 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
11. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1.941 - 0.941 - - - 1.000 - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
12. col8a1b ENSDARG00000003533 18 1.941 - 0.941 - - - - - - 1.000 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
13. si:dkeyp-33e11.1 6 1.941 - 0.941 - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
14. MYL2 MYL2 7 1.941 - 0.941 - 1.000 - - - - -
15. dmrt1 ENSDARG00000007349 16 1.941 - 0.941 - - - 1.000 - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
16. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1.941 - 0.941 - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
17. si:ch211-57m13.9 ENSDARG00000095884 10 1.941 - 0.941 - - - - - - 1.000 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
18. igsf5 igsf5 85 1.941 - 0.941 - - - - 1.000 - -
19. LMTK3 LMTK3 222 1.92 0.979 0.941 - - - - - - -
20. dclre1a ENSDARG00000091768 94 1.903 0.962 0.941 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
21. aatkb ENSDARG00000104442 392 1.886 0.945 0.941 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
22. tceanc2 ENSDARG00000062919 32 1.858 - - - - - - 1.000 - 0.858 transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
23. si:ch211-209f23.3 ENSDARG00000095607 15 1.853 - - - - - 0.853 1.000 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
24. zgc:153345 ENSDARG00000055622 29 1.842 - - - - - 0.842 1.000 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
25. spi1a ENSDARG00000067797 113 1.833 - 0.989 - - - 0.844 - - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
26. si:dkey-208k4.1 si:dkey-208k4.1 15 1.823 0.823 - - - - - 1.000 - -
27. cyp2aa2 ENSDARG00000104811 77 1.823 0.823 - - - - 1.000 - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
28. ralgapa1 ENSDARG00000076889 36 1.823 0.823 - - - - 1.000 - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
29. CR318593.1_1 CR318593.1_1 8 1.823 0.823 - - - - 1.000 - - -
30. slc5a2 ENSDARG00000100919 47 1.823 0.823 - - - - 1.000 - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
31. znf512 ENSDARG00000041910 20 1.814 - 0.814 - - - 1.000 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
32. NFATC4 ENSDARG00000054162 44 1.814 - 0.941 - - - 0.873 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
33. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.811 0.870 0.941 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
34. si:dkey-10f21.16 si:dkey-10f21.16 252 1.802 - 0.802 - - - - 1.000 - -
35. CABZ01060030.1 ENSDARG00000106579 55 1.794 0.794 - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
36. CABZ01086354.1 CABZ01086354.1 22 1.789 - - - 0.789 - 1.000 - - -
37. scd ENSDARG00000033662 146 1.779 0.823 - - - - - - - 0.956 stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
38. fbxw10 ENSDARG00000086484 11 1.769 - - - - 0.769 1.000 - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
39. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1.764 0.823 0.941 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
40. MLLT4 MLLT4 67 1.764 0.823 0.941 - - - - - - -
41. CIR1 ENSDARG00000099733 66 1.764 0.823 0.941 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
42. sez6l ENSDARG00000100594 35 1.764 0.823 0.941 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
43. figf 48 1.764 0.823 0.941 - - - - - - - c-fos induced growth factor, transcript variant X2
44. si:ch211-152l15.4 si:ch211-152l15.4 13 1.764 0.823 0.941 - - - - - - -
45. nmrk1 ENSDARG00000037913 18 1.764 0.823 0.941 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
46. drc1 ENSDARG00000042182 39 1.759 - - - - 0.759 1.000 - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
47. cdk20 ENSDARG00000003867 27 1.75 - - - 0.750 - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
48. slc22a7a ENSDARG00000056028 2426 1.744 0.801 0.943 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
49. rhoab ENSDARG00000094673 26 1.736 0.736 - - - - - 1.000 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
50. si:ch211-198c19.2 si:ch211-198c19.2 165 1.734 - 0.941 - - - - 0.793 - -
51. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.726 0.737 0.989 - - - - - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
52. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1.718 - 0.941 - - - 0.777 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
53. tmem178 ENSDARG00000020758 77 1.718 0.777 0.941 - - - - - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
54. LINGO2 LINGO2 300 1.717 0.728 0.989 - - - - - - -
55. ARSI_1 ARSI_1 38 1.712 0.823 - - - - 0.889 - - -
56. zgc:152968 ENSDARG00000037002 6 1.71 - 0.941 - - 0.769 - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
57. fam43b ENSDARG00000070222 92 1.707 - 0.941 - - - - 0.766 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
58. GRIN2B GRIN2B 140 1.707 - 0.941 - - - - 0.766 - -
59. C17H15orf41 C17H15orf41 313 1.705 0.813 0.892 - - - - - - -
60. kif17 ENSDARG00000055238 12 1.702 - - - - - 0.702 1.000 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
61. msgn1 ENSDARG00000070546 188 1.69 - 0.941 - - 0.749 - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
62. cdk5r1a ENSDARG00000037916 46 1.687 - 0.941 - - - 0.746 - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
63. supt3h ENSDARG00000098141 18 1.685 0.744 0.941 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
64. CR626874.1 ENSDARG00000100141 55 1.676 - 0.941 - - - - - - 0.735
65. wdr17 ENSDARG00000075098 83 1.674 0.733 0.941 - - - - - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
66. si:dkeyp-10a3.2 18 1.672 - 0.941 - - - - - - 0.731 si:dkeyp-10a3.2
67. vcam1 vcam1 243 1.648 0.707 0.941 - - - - - - -
68. pax7b ENSDARG00000070818 282 1.616 0.746 0.870 - - - - - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
69. golga2 ENSDARG00000063197 30 1.614 - 0.741 - - - 0.873 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
70. bhlhe22 ENSDARG00000058039 1673 1.597 0.704 0.893 - - - - - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
71. mapk8a ENSDARG00000031888 44 1.589 0.847 - - - - - 0.742 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
72. SMOC1 ENSDARG00000088255 507 1.582 - 0.872 - 0.710 - - - - - SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
73. rnf25 ENSDARG00000027182, ENSDARG00000109462, ENSDARG00000114859 246 1.576 - 0.817 - - - - 0.759 - - ring finger protein 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1581]
74. CCDC89 CCDC89 40 1.565 - - - 0.799 - - 0.766 - -
75. LYPLAL1 ENSDARG00000088764 87 1.561 - 0.808 - - 0.753 - - - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
76. pls1 ENSDARG00000039272 39 1.554 0.823 - - - - 0.731 - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
77. mms19 ENSDARG00000079067 65 1.541 0.823 - - - - - 0.718 - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
78. cog1 ENSDARG00000105131 35 1.541 0.823 - - - - - 0.718 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
79. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.537 0.775 0.762 - - - - - - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
80. gch2 ENSDARG00000099101 45623 1.532 0.718 0.814 - - - - - - - GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
81. C18H15orf61 C18H15orf61 104 1.531 0.823 - - - - - 0.708 - -
82. lhfpl4a ENSDARG00000111810 206 1.531 0.713 0.818 - - - - - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
83. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.53 0.707 - - - - - - 0.823 - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
84. stap2a ENSDARG00000092810 591 1.52 0.767 - - - - - 0.753 - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
85. osgin2 ENSDARG00000040302 45 1.515 - - - - 0.767 - - - 0.748 oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
86. plekho1a ENSDARG00000061191 98 1.495 0.725 - - - - - 0.770 - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
87. si:ch211-233h19.2 ENSDARG00000042213 47 1.492 0.707 - - 0.785 - - - - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
88. GPR158 GPR158 64 1.482 0.701 - - - 0.781 - - - -
89. slc2a15a ENSDARG00000029894 2674 1.468 0.706 0.762 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
90. tmem136a ENSDARG00000024920 535 1.457 0.748 - - - - - 0.709 - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
91. dnm2a ENSDARG00000069937 32 1.455 - 0.723 - - - 0.732 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
92. tagln3a ENSDARG00000079805 123 1.45 0.712 - - - - - 0.738 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
93. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
94. zdhhc12b ENSDARG00000052787 43 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
95. PCBP3 ENSDARG00000054378 17 1 - - - - - 1.000 - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
96. CCDC74B CCDC74B 8 1 - - - - - - 1.000 - -
97. si:dkey-66i24.10 si:dkey-66i24.10 6 1 - - - - - 1.000 - - -
98. RBBP6_3 RBBP6_3 34 1 - - - - - 1.000 - - -
99. BX323882.1 ENSDARG00000101656 2 1 - - - - - 1.000 - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
100. elmod3 ENSDARG00000074742 6 1 - - - - - - 1.000 - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]

There are 1438 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA