Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ERCC8

Gene Name Gene ID Reads Annotation
ERCC8 ENSGALG00000014732 1181 ERCC excision repair 8, CSA ubiquitin ligase complex subunit [Source:HGNC Symbol;Acc:HGNC:3439]











Genes with expression patterns similar to ERCC8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ERCC8 ENSGALG00000014732 1181 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ERCC excision repair 8, CSA ubiquitin ligase complex subunit [Source:HGNC Symbol;Acc:HGNC:3439]
2. BIRC6 ENSGALG00000010541 7999 1.486 - - - 0.783 - - 0.703 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
3. GRIN2A ENSGALG00000007278 17 0.882 - - - 0.882 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
4. RYR2 ENSGALG00000010812 95 0.881 - - - 0.881 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
5. C8B ENSGALG00000010853 21 0.88 - - - 0.880 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
6. MMR1L3 ENSGALG00000008638 26 0.88 - - - 0.880 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
7. BFIV21 BFIV21 30 0.878 - - - 0.878 - - - - - -
8. PROC ENSGALG00000001780 26 0.877 - - - 0.877 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
9. AIM1 51 0.877 - - - 0.877 - - - - - - absent in melanoma 1, transcript variant X2
10. ENSGALG00000010336 ENSGALG00000010336 16 0.877 - - - 0.877 - - - - - -
11. CUBN ENSGALG00000008704 21 0.875 - - - 0.875 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
12. ATXN3 ENSGALG00000010766 48 0.873 - - - 0.873 - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
13. ANKRD28 ENSGALG00000011226 160 0.873 - - - 0.873 - - - - - - ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
14. EPB41L4A ENSGALG00000000234 113 0.87 - - - 0.870 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
15. CFAP74 ENSGALG00000001288 54 0.867 - - - 0.867 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
16. CABP1 ENSGALG00000007116 54 0.865 - - - 0.865 - - - - - - calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1384]
17. RPLP1 ENSGALG00000030878 445592 0.86 - - - 0.860 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
18. KIAA0319L ENSGALG00000002445 75 0.858 - - - 0.858 - - - - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
19. TMC7 ENSGALG00000006889 125 0.856 - - - 0.856 - - - - - - transmembrane channel like 7 [Source:NCBI gene;Acc:416610]
20. RASAL2 ENSGALG00000004323 55 0.855 - - - 0.855 - - - - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
21. SRR ENSGALG00000003155 93 0.851 - - - 0.851 - - - - - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
22. CHAMP1 ENSGALG00000016813 508 0.85 - - - 0.850 - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
23. UBE2A ENSGALG00000008648 174 0.845 - - - 0.845 - - - - - - ubiquitin conjugating enzyme E2 A [Source:NCBI gene;Acc:395672]
24. SPG11 ENSGALG00000008180 1890 0.844 - - - 0.844 - - - - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
25. VPS45 ENSGALG00000013899 154 0.839 - - - 0.839 - - - - - - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
26. ENSGALG00000026058 ENSGALG00000026058 144 0.83 - - - 0.830 - - - - - -
27. KIF1B ENSGALG00000002726 461 0.83 - - - 0.830 - - - - - - kinesin family member 1B [Source:HGNC Symbol;Acc:HGNC:16636]
28. STK17B ENSGALG00000007924 519 0.829 - - - 0.829 - - - - - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
29. BTBD7 4136 0.829 - - - - - - - - 0.829 - BTB domain containing 7, transcript variant X2
30. MRPS14 ENSGALG00000030028 1987 0.827 - - - 0.827 - - - - - - mitochondrial ribosomal protein S14 [Source:NCBI gene;Acc:424436]
31. PTGS2 ENSGALG00000033635 426 0.824 - - - 0.824 - - - - - - prostaglandin-endoperoxide synthase 2 [Source:NCBI gene;Acc:396451]
32. NTN4 ENSGALG00000011406 72 0.82 - - - 0.820 - - - - - - netrin 4 [Source:HGNC Symbol;Acc:HGNC:13658]
33. MTHFSD ENSGALG00000033322 824 0.819 - - - 0.819 - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
34. MYO3B ENSGALG00000009602 315 0.818 - - - 0.818 - - - - - - myosin IIIB [Source:HGNC Symbol;Acc:HGNC:15576]
35. C2orf44 C2orf44 2869 0.815 - - - 0.815 - - - - - -
36. USP15 ENSGALG00000030024 2761 0.815 - - - - - - - - 0.815 - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
37. ZMYM4 ENSGALG00000002499 435 0.815 - - - 0.815 - - - - - - zinc finger MYM-type containing 4, transcript variant X1
38. FLNB ENSGALG00000005678 68 0.81 - - - 0.810 - - - - - - filamin B [Source:NCBI gene;Acc:378913]
39. ADAP2 ENSGALG00000003319 134 0.809 - - - 0.809 - - - - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
40. CHRDL1 ENSGALG00000008072 711 0.809 - - - 0.809 - - - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
41. FGF3 ENSGALG00000026853 89 0.808 - - - 0.808 - - - - - - fibroblast growth factor 3 [Source:NCBI gene;Acc:396267]
42. gga-mir-6665 ENSGALG00000028814 430 0.807 - - - - - - - - 0.807 - gga-mir-6665 [Source:miRBase;Acc:MI0022485]
43. DNAJC13 ENSGALG00000035068 180 0.805 - - - 0.805 - - - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
44. TIMM23B ENSGALG00000002089 8122 0.804 - - - 0.804 - - - - - - translocase of inner mitochondrial membrane 23 homolog B
45. EIF6 ENSGALG00000033993 14647 0.803 - - - - - - - - 0.803 - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
46. ENSGALG00000029084 ENSGALG00000029084 890 0.802 - - - - - - - - 0.802 -
47. LHFPL4 ENSGALG00000037636 221 0.801 - - - - - - - - 0.801 - LHFPL tetraspan subfamily member 4 [Source:HGNC Symbol;Acc:HGNC:29568]
48. GPR20 ENSGALG00000041730 1926 0.801 - - - 0.801 - - - - - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
49. WAPAL WAPAL 625 0.8 - - - - - - - - 0.800 -
50. ZNF710 ENSGALG00000036163 215 0.799 - - - - - - - - 0.799 - zinc finger protein 710 [Source:HGNC Symbol;Acc:HGNC:25352]
51. SMOC2 ENSGALG00000011205 340 0.798 - - - 0.798 - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
52. IRAK4 ENSGALG00000009586 289 0.797 - - - - - - - - 0.797 - interleukin 1 receptor associated kinase 4 [Source:NCBI gene;Acc:417796]
53. LAS1L ENSGALG00000043447 3146 0.796 - - - 0.796 - - - - - - LAS1 like, ribosome biogenesis factor [Source:HGNC Symbol;Acc:HGNC:25726]
54. DENND6A ENSGALG00000005656 831 0.796 - - - 0.796 - - - - - - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
55. ZNF507 ENSGALG00000004532 78 0.795 - - - - - - - - 0.795 - zinc finger protein 507, transcript variant X2
56. NCF4 ENSGALG00000038141 216 0.792 - - - - - - - - 0.792 - neutrophil cytosolic factor 4 [Source:NCBI gene;Acc:418052]
57. LYRM4 ENSGALG00000027339 2917 0.789 - - - - - - - - 0.789 - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
58. FGF9 ENSGALG00000025748 469 0.786 - - - 0.786 - - - - - - fibroblast growth factor 9 [Source:NCBI gene;Acc:378917]
59. TMEM220 ENSGALG00000033996 405 0.785 - - - 0.785 - - - - - - transmembrane protein 220 [Source:HGNC Symbol;Acc:HGNC:33757]
60. SYNGR1 ENSGALG00000027665 737 0.783 - - - - - - - - 0.783 - synaptogyrin 1 [Source:NCBI gene;Acc:418015]
61. BRD2 ENSGALG00000000156 1670 0.782 - - - 0.782 - - - - - - bromodomain containing 2 [Source:NCBI gene;Acc:417049]
62. MCM3AP ENSGALG00000004363 3247 0.781 - - - - - - 0.781 - - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
63. KIDINS220 ENSGALG00000016409 854 0.78 - - - 0.780 - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
64. CRYBA1 ENSGALG00000004035 176 0.778 - - - 0.778 - - - - - - crystallin beta A1 [Source:NCBI gene;Acc:396499]
65. MKNK1 ENSGALG00000010440 196 0.778 - - - 0.778 - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
66. NCDN ENSGALG00000002408 6180 0.777 - - - 0.777 - - - - - - neurochondrin [Source:NCBI gene;Acc:419633]
67. RTCB ENSGALG00000012611 14360 0.777 - - - - - - 0.777 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
68. TULP3 ENSGALG00000013424 2064 0.772 - - - 0.772 - - - - - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
69. MBIP ENSGALG00000010096 2476 0.769 - - - - - - 0.769 - - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
70. LOC100858777 ENSGALG00000027624 58 0.768 - - - 0.768 - - - - - - rhodopsin, GQ-coupled-like
71. NPR2 ENSGALG00000027630 871 0.766 - - - 0.766 - - - - - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
72. ENSGALG00000006584 ENSGALG00000006584 1569 0.764 - - 0.764 - - - - - - -
73. RUNDC3B ENSGALG00000008954 924 0.763 - - - 0.763 - - - - - - RUN domain containing 3B [Source:NCBI gene;Acc:420535]
74. MYCBPAP ENSGALG00000007661 369 0.763 - - - 0.763 - - - - - - MYCBP associated protein [Source:HGNC Symbol;Acc:HGNC:19677]
75. H2AFY2 ENSGALG00000004794 576 0.762 - - - - - - - - 0.762 - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
76. CDKL2 ENSGALG00000010119 673 0.761 - - - 0.761 - - - - - - cyclin dependent kinase like 2 [Source:HGNC Symbol;Acc:HGNC:1782]
77. RAF1 ENSGALG00000004998 327 0.76 - - - 0.760 - - - - - - Raf-1 proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396245]
78. CHAF1A ENSGALG00000001126 6506 0.759 - - - 0.759 - - - - - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
79. C12orf43 ENSGALG00000006965 437 0.757 - - - 0.757 - - - - - - chromosome 12 open reading frame 43 [Source:HGNC Symbol;Acc:HGNC:25719]
80. PAN3 ENSGALG00000017092 5387 0.754 - - - - - - 0.754 - - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
81. CASP7 ENSGALG00000008933 506 0.754 - - - 0.754 - - - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
82. RGS7BP ENSGALG00000027389 1414 0.754 - - - - - - - - 0.754 - regulator of G protein signaling 7 binding protein [Source:HGNC Symbol;Acc:HGNC:23271]
83. ADAL ENSGALG00000004038 113 0.753 - - - 0.753 - - - - - - adenosine deaminase like [Source:NCBI gene;Acc:415391]
84. TMEM161A ENSGALG00000025809 2813 0.752 - - - 0.752 - - - - - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
85. ECHDC1 ENSGALG00000014828 958 0.751 - - - 0.751 - - - - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
86. PARPBP ENSGALG00000012756 1895 0.75 - - - - - - - - 0.750 - PARP1 binding protein [Source:NCBI gene;Acc:418092]
87. RNF126 ENSGALG00000042948 4724 0.75 - - - 0.750 - - - - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
88. GPR155 ENSGALG00000014209 1281 0.75 - - - - - - - - 0.750 - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
89. ERMP1 ENSGALG00000000438 1136 0.75 - - - - - - - - 0.750 - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
90. FSTL5 ENSGALG00000041736 204 0.749 - - - 0.749 - - - - - - follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]
91. POLE ENSGALG00000007665 4517 0.745 - - - - - - - - 0.745 - DNA polymerase epsilon, catalytic subunit
92. ASB3 ENSGALG00000008176 5422 0.744 - - - - - - - - 0.744 - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
93. RPRD2 ENSGALG00000014656 939 0.744 - - - 0.744 - - - - - - regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
94. TIMM21 ENSGALG00000013709 3215 0.744 - - - - - - - - 0.744 - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
95. NOP16 ENSGALG00000003355 10692 0.743 - - - - - - 0.743 - - - NOP16 nucleolar protein
96. SNORD35 SNORD35 366 0.743 - - - 0.743 - - - - - -
97. GRK4 ENSGALG00000015645 1065 0.743 - - - - - - - 0.743 - - G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
98. MFN1 ENSGALG00000041873 4170 0.743 - - - - - - 0.743 - - - mitofusin 1 [Source:NCBI gene;Acc:424973]
99. FAM161B ENSGALG00000010196 672 0.742 - - - 0.742 - - - - - - FAM161B, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:19854]
100. VPS13C ENSGALG00000003705 1331 0.74 - - 0.740 - - - - - - - vacuolar protein sorting 13 homolog C [Source:HGNC Symbol;Acc:HGNC:23594]

There are 66 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA