Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EPCAM

Gene Name Gene ID Reads Annotation
EPCAM ENSGALG00000008969 10014 epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]











Genes with expression patterns similar to EPCAM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EPCAM ENSGALG00000008969 10014 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
2. UPK3BL ENSGALG00000001885 1650 2.592 - 0.877 - - - - - - 0.911 0.804 uroplakin 3B-like
3. CDH1 ENSGALG00000000608 6156 2.505 - - 0.782 - - - - - 0.855 0.868 cadherin 3 [Source:NCBI gene;Acc:414845]
4. TYMS ENSGALG00000014897 20484 1.877 - - - - - - 0.940 0.937 - - thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
5. GAL10 GAL10 33355 1.737 - - - - - - - - 0.863 0.874
6. ASTL ENSGALG00000037220 2775 1.735 - - - - - - - - 0.849 0.886 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
7. BMP7 ENSGALG00000007668 6645 1.694 - - 0.704 - - - 0.990 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
8. C1orf216 ENSGALG00000002353 1886 1.687 - - - - - - - - 0.871 0.816 chromosome 1 open reading frame 216 [Source:HGNC Symbol;Acc:HGNC:26800]
9. TSPAN8 ENSGALG00000010152 2666 1.647 - - - - - - - - 0.775 0.872 tetraspanin 8 [Source:NCBI gene;Acc:417854]
10. DCDC2 ENSGALG00000042454 2306 1.617 - - - - - - - - 0.808 0.809 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
11. PGO2 PGO2 589 1.588 - - - - - - - - 0.810 0.778
12. CDH3 5050 1.58 - - - - - 0.779 - - 0.801 - cadherin 3
13. CDH17 ENSGALG00000035094 521 1.55 - - - - - - - - 0.799 0.751 cadherin 17 [Source:NCBI gene;Acc:420225]
14. KLF8 ENSGALG00000007570 1651 1.547 - 0.788 - - - 0.759 - - - - Kruppel-like factor 8, transcript variant X6
15. SLC2A9 ENSGALG00000014971 751 1.534 - - - - - - - - 0.762 0.772 solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
16. LGALS3 ENSGALG00000012173 3306 1.502 - 0.739 - - - - - - - 0.763 galectin 3 [Source:NCBI gene;Acc:373917]
17. ESRP2 ENSGALG00000003374 4436 1.485 - 0.735 - 0.750 - - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
18. MPZL3 ENSGALG00000021271 1857 1.474 - 0.737 - - - - - - - 0.737 myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
19. SEC62 ENSGALG00000009379 15745 0.999 - - - - - - 0.999 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
20. ISY1 ENSGALG00000005012 7477 0.999 - - - - - - 0.999 - - - ISY1 splicing factor homolog
21. NAE1 ENSGALG00000038957 13777 0.999 - - - - - - 0.999 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
22. ARL14EP ENSGALG00000012139 4690 0.999 - - - - - - 0.999 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
23. HINT3 ENSGALG00000044342 5674 0.999 - - - - - - 0.999 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
24. PPP2R3B ENSGALG00000016702 1538 0.998 - - - - - - 0.998 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
25. IRX2 ENSGALG00000013193 2170 0.998 - - - - - - 0.998 - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
26. D1A D1A 1026 0.998 - - - - - - 0.998 - - -
27. SUPT4H1 ENSGALG00000000944 8675 0.998 - - - - - - 0.998 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
28. MTRR ENSGALG00000039424 3197 0.998 - - - - - - 0.998 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
29. ZWILCH ENSGALG00000007736 4939 0.998 - - - - - - 0.998 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
30. ELP3 ENSGALG00000016624 4483 0.998 - - - - - - 0.998 - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
31. PSIP1 ENSGALG00000015105 8322 0.998 - - - - - - 0.998 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
32. MAP3K4 ENSGALG00000020003 6378 0.998 - - - - - - 0.998 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
33. GRSF1 2406 0.998 - - - - - - 0.998 - - - G-rich RNA sequence binding factor 1, transcript variant X2
34. RBM38 ENSGALG00000026081 7115 0.998 - - - - - - 0.998 - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
35. C5orf22 ENSGALG00000012909 3537 0.997 - - - - - - 0.997 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
36. FAM72A ENSGALG00000000791 17723 0.997 - - - - - - 0.997 - - - family with sequence similarity 72 member A, transcript variant X1
37. PDAP1 ENSGALG00000036552 28881 0.994 - - - - - - 0.994 - - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
38. UBLCP1 ENSGALG00000003672 9332 0.994 - - - - - - 0.994 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
39. ARMC1 ENSGALG00000036567 5476 0.991 - - - - - - 0.991 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
40. ZFP91 ENSGALG00000007287 13681 0.991 - - - - - - 0.991 - - - ZFP91 zinc finger protein
41. PTRHD1 ENSGALG00000016610 3636 0.991 - - - - - - 0.991 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
42. COX7B ENSGALG00000007863 59194 0.986 - - - - - - 0.986 - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
43. POLR2L ENSGALG00000006841 33915 0.984 - - - - - - 0.984 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
44. RBM5 30998 0.984 - - - - - - 0.984 - - - RNA binding motif protein 5, transcript variant X1
45. GDI2 ENSGALG00000008169 67151 0.984 - - - - - - 0.984 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
46. EIF3E ENSGALG00000037067 36561 0.98 - - - - - - 0.980 - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
47. HSPD1 ENSGALG00000008094 40870 0.979 - - - - - - 0.979 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
48. CAPZB ENSGALG00000004034 19630 0.956 - - - - - - 0.956 - - - capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
49. CDC42SE1 ENSGALG00000028119 14813 0.954 - - - - - - 0.954 - - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
50. PNRC1 ENSGALG00000015780 75894 0.939 - - - - - - 0.939 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
51. MLF2 ENSGALG00000014468 45953 0.934 - - - - - - 0.934 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
52. HSP90B1 ENSGALG00000033789 58910 0.93 - - - - - - 0.930 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
53. RPL27A ENSGALG00000005948 363481 0.911 - - - - - - 0.911 - - - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
54. HNRNPH3 ENSGALG00000003947 28724 0.892 - - - - - - - 0.892 - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
55. FAH ENSGALG00000006482 589 0.884 - - - - - - - - - 0.884 fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
56. TAX1BP3 ENSGALG00000004618 35172 0.881 - - - - - - 0.881 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
57. EMP2 ENSGALG00000027058 3925 0.877 - - 0.877 - - - - - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
58. EIF3F ENSGALG00000005326 76059 0.877 - - - - - - 0.877 - - - eukaryotic translation initiation factor 3 subunit F
59. MAB21L2 4841 0.865 - - - - - 0.865 - - - - mab-21-like 2 (C. elegans)
60. FKBP25 FKBP25 38434 0.855 - - - - - - 0.855 - - -
61. GSTA3 ENSGALG00000016325 1254 0.855 - - - - - - - - - 0.855 glutathione S-transferase alpha 3 [Source:NCBI gene;Acc:414896]
62. PDS5A ENSGALG00000014286 13077 0.852 - - 0.852 - - - - - - - PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
63. TMEM52B ENSGALG00000034698 169 0.842 - - - - - - - - - 0.842 transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
64. MDM1 ENSGALG00000009905 825 0.841 - - - - - - - - 0.841 - Mdm1 nuclear protein [Source:NCBI gene;Acc:417839]
65. CLCNKB ENSGALG00000003713 27 0.837 - - - - - - - - 0.837 - chloride voltage-gated channel Kb, transcript variant X3
66. SMS ENSGALG00000016379 11607 0.822 - - - - - - - - - 0.822 spermine synthase [Source:NCBI gene;Acc:418602]
67. NDNF ENSGALG00000011962 2261 0.817 - - 0.817 - - - - - - - neuron-derived neurotrophic factor, transcript variant X4
68. HNF1B ENSGALG00000005504 1146 0.814 - - - - - - - - - 0.814 HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
69. RBPMS ENSGALG00000010291 3663 0.813 - - - - - 0.813 - - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
70. PAX2 ENSGALG00000005689 351 0.802 - - - - - - - - - 0.802 paired box 2 [Source:NCBI gene;Acc:395574]
71. EMX1 ENSGALG00000030516 408 0.802 - - - - - - - - - 0.802 empty spiracles homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3340]
72. TF ENSGALG00000006453 14007 0.798 - - - - - - - - - 0.798 transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
73. GPX1 ENSGALG00000028204 62935 0.79 - - - - - 0.790 - - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
74. NMD3 ENSGALG00000009533 8726 0.787 - - - - - - 0.787 - - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
75. RIPK4 ENSGALG00000040189 102 0.784 - - 0.784 - - - - - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
76. TEX264 ENSGALG00000003832 3053 0.782 - - 0.782 - - - - - - - testis expressed 264 [Source:NCBI gene;Acc:415938]
77. REPS2 ENSGALG00000016545 3347 0.782 - - - - - - - - 0.782 - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
78. C1H11ORF70 ENSGALG00000017189 395 0.781 - - 0.781 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
79. SUSD3 ENSGALG00000025886 639 0.775 - - - - - - - - 0.775 - sushi domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28391]
80. TMEM192 ENSGALG00000009528 2428 0.771 - - 0.771 - - - - - - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
81. CDX1 ENSGALG00000005679 461 0.77 - - - - - 0.770 - - - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
82. BOC ENSGALG00000015152 4868 0.77 - - 0.770 - - - - - - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
83. ELF3 ENSGALG00000000616 217 0.77 - - - - - - - - - 0.770 E74 like ETS transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3318]
84. GPC3 ENSGALG00000006087 3744 0.77 - - - - - 0.770 - - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
85. DNAJB14 ENSGALG00000014026 598 0.769 - - 0.769 - - - - - - - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
86. FEV ENSGALG00000026698 216 0.767 - - - - - 0.767 - - - - FEV, ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:18562]
87. TAGLN ENSGALG00000011902 12030 0.766 - - - - - - - - 0.766 - transgelin [Source:NCBI gene;Acc:396490]
88. PLEKHA5 ENSGALG00000013134 3656 0.766 - - 0.766 - - - - - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
89. LGALS2 ENSGALG00000003213 1089 0.763 - - - - - - - - - 0.763 galectin 2, transcript variant X2
90. EVX1 ENSGALG00000037310 1974 0.763 - 0.763 - - - - - - - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
91. C4orf19 ENSGALG00000027885 305 0.762 - - - - - - - - - 0.762 chromosome 4 open reading frame 19 [Source:HGNC Symbol;Acc:HGNC:25618]
92. SYT8 ENSGALG00000006602 369 0.761 - - - - - 0.761 - - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
93. ENSGALG00000011942 ENSGALG00000011942 175 0.76 - - 0.760 - - - - - - -
94. GTF2E2 ENSGALG00000010283 3936 0.759 - - 0.759 - - - - - - - general transcription factor IIE subunit 2 [Source:NCBI gene;Acc:771227]
95. UXS1 ENSGALG00000016801 3724 0.759 - - - - - - - - - 0.759 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
96. DGKZ ENSGALG00000008380 5389 0.758 - - 0.758 - - - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
97. TOR4A ENSGALG00000008623 1364 0.757 - - - - - - - - - 0.757 torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
98. RBPJ ENSGALG00000014365 119 0.753 - - 0.753 - - - - - - - recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]
99. KIDINS220 ENSGALG00000016409 854 0.752 - - 0.752 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
100. TJP1 ENSGALG00000042552 3081 0.752 - - 0.752 - - - - - - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]

There are 92 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA