Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EN1

Gene Name Gene ID Reads Annotation
EN1 ENSGALG00000042389 3051 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]











Genes with expression patterns similar to EN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EN1 ENSGALG00000042389 3051 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
2. ACTC1 ENSGALG00000009844 20914 4.008 - - 0.847 0.848 0.801 0.796 - - 0.716 - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. C1QTNF3 ENSGALG00000027887 8646 3.97 - - 0.806 0.748 0.867 0.744 - - - 0.805 C1q and tumor necrosis factor related protein 3, transcript variant X1
4. TNNI1 ENSGALG00000000313 4069 3.271 - - 0.795 - 0.724 0.909 - - 0.843 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
5. TNNC2 ENSGALG00000006835 2963 3.125 - - 0.823 0.703 0.802 0.797 - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
6. KLHL31 ENSGALG00000016309 1518 2.914 - - 0.714 0.733 0.744 0.723 - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
7. MYL2_1 ENSGALG00000004582 2367 2.506 - - 0.884 - 0.841 - - - 0.781 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
8. SOX9 ENSGALG00000004386 14802 2.501 - - 0.868 0.759 0.874 - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
9. PAX1 ENSGALG00000039040 3339 2.482 - - 0.833 0.751 0.898 - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
10. RGMA ENSGALG00000039173 12874 2.468 - - 0.818 - - 0.749 - - - 0.901 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
11. MYH15 ENSGALG00000015358 6304 2.441 - - - - 0.832 - - - 0.816 0.793 myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
12. MYL1 ENSGALG00000002907 1300 2.431 - - 0.870 0.744 0.817 - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
13. gga-mir-7474 ENSGALG00000033766 5727 2.377 - - - 0.773 0.841 - - - 0.763 - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
14. PKD2L2 ENSGALG00000006120 592 2.345 - - 0.764 0.708 0.873 - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
15. TCF15 ENSGALG00000026276 3646 2.296 - - 0.781 - 0.790 0.725 - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
16. HPCAL1 ENSGALG00000016443 6633 2.24 - - 0.790 - 0.709 0.741 - - - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
17. MYBPC1 ENSGALG00000012783 317 1.745 - - 0.932 - 0.813 - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
18. GGMOXR1 GGMOXR1 6734 1.681 - - 0.801 - 0.880 - - - - -
19. PRDM8 ENSGALG00000038372 928 1.65 - - - - - 0.793 - - - 0.857 PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
20. LECT1 LECT1 12694 1.642 - - 0.761 - 0.881 - - - - -
21. UNC45B ENSGALG00000002186 399 1.596 - - 0.713 - - 0.883 - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
22. ACTA1 ENSGALG00000011086 2543 1.594 - - 0.844 - 0.750 - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
23. STMN2 ENSGALG00000039690 989 1.584 - - - - 0.804 - - - - 0.780 stathmin 2 [Source:NCBI gene;Acc:396095]
24. TPM1 ENSGALG00000003521 11894 1.581 - - - 0.755 0.826 - - - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
25. SHISA3 ENSGALG00000026042 1108 1.561 - - - - 0.790 - - - - 0.771 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
26. NTM ENSGALG00000001437 584 1.558 - - 0.759 - - - - - - 0.799 neurotrimin [Source:NCBI gene;Acc:395450]
27. ENSGALG00000010113 ENSGALG00000010113 508 1.556 - - 0.835 0.721 - - - - - -
28. TNNT3 ENSGALG00000006572 1652 1.549 - - 0.800 0.749 - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
29. MYL3 ENSGALG00000005448 3379 1.537 - - 0.810 - - - - - 0.727 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
30. CRMP1B CRMP1B 18633 1.533 - - - - - 0.706 - - - 0.827
31. PAX-9 PAX-9 491 1.526 - - 0.725 - 0.801 - - - - -
32. TNNT2 ENSGALG00000000302 568 1.497 - - 0.706 - 0.791 - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
33. COL9A2 ENSGALG00000027526 4685 1.487 - - 0.784 - 0.703 - - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
34. LOC771069 ENSGALG00000023936 4093 1.475 - - 0.713 - - - 0.762 - - - C-factor-like, transcript variant X2
35. MYF5 ENSGALG00000028091 1965 1.47 - - 0.744 - - 0.726 - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
36. ENSGALG00000027002 ENSGALG00000027002 7570 1.466 - - - - - - - 0.761 - 0.705
37. SPON1 ENSGALG00000038775 16503 1.461 - - 0.727 - 0.734 - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
38. NTN3 ENSGALG00000029072 1368 1.456 - - - - 0.703 - - - - 0.753 netrin 1 [Source:NCBI gene;Acc:396387]
39. EFEMP1 ENSGALG00000037901 704 1.454 - - 0.738 - 0.716 - - - - - EGF containing fibulin extracellular matrix protein 1 [Source:HGNC Symbol;Acc:HGNC:3218]
40. MYL2 ENSGALG00000004582 2245 1.442 - 0.733 0.709 - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
41. WNT6 ENSGALG00000011358 1886 0.889 - - - - - - - 0.889 - - Wnt family member 6 [Source:NCBI gene;Acc:395235]
42. FAM110A ENSGALG00000046425 5558 0.882 - - - - - - - - - 0.882 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
43. GPM6A ENSGALG00000043480 2133 0.88 - - - - - - - - - 0.880 glycoprotein M6A [Source:NCBI gene;Acc:422569]
44. ELAVL4 ENSGALG00000010533 4978 0.875 - - - - - - - - - 0.875 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
45. MYT1 ENSGALG00000005932 2017 0.875 - - - - - - - - - 0.875 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
46. WSCD2 ENSGALG00000004849 477 0.874 - - - - - - - - - 0.874 WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
47. TBX18 ENSGALG00000032789 1768 0.871 - - - - - - - 0.871 - - T-box 18 [Source:NCBI gene;Acc:395104]
48. RBM24 ENSGALG00000012712 4138 0.865 - - - - - 0.865 - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
49. MYOD1 ENSGALG00000006216 568 0.864 - - - - - 0.864 - - - - myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
50. PRRX1 ENSGALG00000003324 4859 0.861 - - - - - - - 0.861 - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
51. BRT-1 BRT-1 26083 0.861 - - - - 0.861 - - - - -
52. SMOC1 ENSGALG00000009415 2403 0.858 - - 0.858 - - - - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
53. NEFM ENSGALG00000000317 6992 0.855 - - - - - - - - - 0.855 neurofilament medium [Source:NCBI gene;Acc:396206]
54. DLX5 ENSGALG00000009129 1395 0.853 - - - - - - - 0.853 - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
55. ISL1 ENSGALG00000014884 7666 0.851 - - - - - - - - - 0.851 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
56. PLPPR1 ENSGALG00000015542 3179 0.848 - - - - - - - - - 0.848 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
57. NDNF ENSGALG00000011962 2261 0.847 - - - - - - - 0.847 - - neuron-derived neurotrophic factor, transcript variant X4
58. TRIM55 ENSGALG00000041327 1097 0.846 - - 0.846 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
59. NHLH1 ENSGALG00000025817 1617 0.846 - - - - - - - - - 0.846 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
60. EMILIN3 ENSGALG00000030012 6200 0.841 - - 0.841 - - - - - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
61. NGFR ENSGALG00000035950 13452 0.833 - 0.833 - - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
62. CYP26A1 ENSGALG00000033695 2646 0.832 - - - - - - - 0.832 - - cytochrome P450 family 26 subfamily A member 1 [Source:NCBI gene;Acc:408183]
63. SERPINB14 SERPINB14 196 0.831 - 0.831 - - - - - - - -
64. CRIP1 ENSGALG00000002771 4270 0.829 - - 0.829 - - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
65. GADD45_1 GADD45_1 1433 0.826 - - - - - - - - - 0.826
66. PCDH8 ENSGALG00000036258 1945 0.825 - - - - - - - - - 0.825 protocadherin 8 [Source:NCBI gene;Acc:428065]
67. XIRP1 ENSGALG00000006025 729 0.821 - - - - 0.821 - - - - - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
68. FGF12 ENSGALG00000036971 2631 0.82 - - - - - - 0.820 - - - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
69. RTN1 ENSGALG00000012006 2438 0.819 - - - - - - - - - 0.819 reticulon 1 [Source:NCBI gene;Acc:378791]
70. TNNI2 ENSGALG00000006591 690 0.818 - - 0.818 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
71. FABP7 ENSGALG00000038933 6780 0.816 - - - - - - - - - 0.816 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
72. NKX-6.2 NKX-6.2 1370 0.815 - - - - 0.815 - - - - -
73. STMN4 ENSGALG00000030929 621 0.811 - - - - - - - - - 0.811 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
74. NFASC ENSGALG00000031776 4264 0.808 - - - - - - - - - 0.808 neurofascin [Source:NCBI gene;Acc:419824]
75. MAB21L2 4841 0.805 - - - - - - 0.805 - - - mab-21-like 2 (C. elegans)
76. TMEM182 ENSGALG00000038936 274 0.805 - - 0.805 - - - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
77. THRSPB 39 0.803 - - - - - 0.803 - - - - thyroid hormone responsive spot 14 beta
78. CYP1B1 ENSGALG00000025822 3143 0.799 - - 0.799 - - - - - - - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
79. NRIP3 ENSGALG00000005903 58 0.798 - - - - - 0.798 - - - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
80. ACBD7 ENSGALG00000019663 2328 0.798 - - 0.798 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
81. BPIFB8 BPIFB8 49 0.797 - - - - - 0.797 - - - -
82. ENSGALG00000007388 ENSGALG00000007388 41 0.796 - - - - - - - - - 0.796
83. TMSB10 TMSB10 518 0.796 - - - - - - - - - 0.796
84. OSF-2 OSF-2 10433 0.796 - - - - - - - 0.796 - -
85. TWIST1 ENSGALG00000041640 1176 0.795 - - - - - - - 0.795 - - twist family bHLH transcription factor 1 [Source:NCBI gene;Acc:395491]
86. TAGLN3 ENSGALG00000015379 7865 0.794 - - - - - - - - - 0.794 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
87. NSG1 ENSGALG00000015010 5829 0.793 - - - - - - - - - 0.793 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
88. NEFL ENSGALG00000000314 4883 0.793 - - - - - - - - - 0.793 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
89. MNX1 ENSGALG00000041154 244 0.793 - - - - - - - 0.793 - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
90. C10orf71 ENSGALG00000027353 19 0.791 - - - - - 0.791 - - - - chromosome 10 open reading frame 71 [Source:HGNC Symbol;Acc:HGNC:26973]
91. GRIP1 ENSGALG00000009895 24 0.791 - - - - - 0.791 - - - - glutamate receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18708]
92. VSX1 ENSGALG00000037576 1517 0.79 - - - - - 0.790 - - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
93. ZBTB18 ENSGALG00000010705 3433 0.789 - - - - - - - - - 0.789 zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
94. MYH1D ENSGALG00000027323 365 0.789 - - 0.789 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
95. TMEM47 ENSGALG00000027198 3619 0.788 - - 0.788 - - - - - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
96. ANGPTL1 ENSGALG00000004290 1922 0.786 - - 0.786 - - - - - - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
97. EF1A EF1A 2378 0.785 - - - - - - - - - 0.785
98. PCDH17 ENSGALG00000016941 1006 0.785 - - - - - - - 0.785 - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
99. AMPD1 ENSGALG00000002082 228 0.784 - - 0.784 - - - - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
100. HSPB2 ENSGALG00000040842 197 0.782 - - - - - - - - 0.782 - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA