Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EMX1

Gene Name Gene ID Reads Annotation
EMX1 ENSGALG00000030516 408 empty spiracles homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3340]











Genes with expression patterns similar to EMX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EMX1 ENSGALG00000030516 408 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 empty spiracles homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3340]
2. ASTL ENSGALG00000037220 2775 3.941 - - - - - 0.913 0.701 0.802 0.737 0.788 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
3. GAL10 GAL10 33355 3.177 - - - - - 0.886 0.777 0.711 - 0.803
4. EMX2 ENSGALG00000009302 2103 2.377 - - - - 0.735 0.872 - 0.770 - - empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
5. GATA3 ENSGALG00000029270 854 1.715 - - - - - 0.873 - 0.842 - - GATA binding protein 3 [Source:NCBI gene;Acc:419106]
6. OTOG ENSGALG00000006208 17 1.673 - - - - - 0.888 - 0.785 - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
7. SMS ENSGALG00000016379 11607 1.616 - - - - - 0.817 - - - 0.799 spermine synthase [Source:NCBI gene;Acc:418602]
8. PAX2 ENSGALG00000005689 351 1.596 - - - - - - - 0.810 - 0.786 paired box 2 [Source:NCBI gene;Acc:395574]
9. PGO2 PGO2 589 1.582 - - - - - - - - 0.765 0.817
10. SCNN1B ENSGALG00000006202 87 1.569 - - - - 0.810 - - - - 0.759 sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
11. TSPAN8 ENSGALG00000010152 2666 1.539 - - - - - - - - 0.736 0.803 tetraspanin 8 [Source:NCBI gene;Acc:417854]
12. SIM1 ENSGALG00000015466 111 1.539 - - - - 0.790 - - 0.749 - - SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
13. TCF4 TCF4 29 1.498 - - - - - 0.706 - 0.792 - -
14. DCDC2 ENSGALG00000042454 2306 1.435 - - - - - - - 0.725 - 0.710 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
15. MSGN1 ENSGALG00000016469 17 0.887 - - - - 0.887 - - - - - mesogenin 1 [Source:NCBI gene;Acc:395419]
16. ENSGALG00000020103 ENSGALG00000020103 64 0.884 - - - - - - - 0.884 - -
17. SMG5 ENSGALG00000029918 8 0.871 - - - - - 0.871 - - - - SMG5, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:24644]
18. TAF5L ENSGALG00000011098 17 0.859 - - - - 0.859 - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
19. DPP10 ENSGALG00000012156 20 0.859 - - - - 0.859 - - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
20. GFRAL ENSGALG00000016296 4 0.859 - - - - - - - 0.859 - - GDNF family receptor alpha like [Source:HGNC Symbol;Acc:HGNC:32789]
21. ABCA9 ENSGALG00000021395 5 0.859 - - - - 0.859 - - - - - ATP binding cassette subfamily A member 9
22. PLAC8 PLAC8 20 0.859 - - - - 0.859 - - - - -
23. gga-mir-6659 ENSGALG00000028216 6 0.859 - - - - 0.859 - - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
24. ENSGALG00000027164 ENSGALG00000027164 8 0.859 - - - - 0.859 - - - - -
25. CCDC84 ENSGALG00000007689 18 0.859 - - - - 0.859 - - - - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
26. TRPV2 ENSGALG00000004519 7 0.859 - - - - 0.859 - - - - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
27. PKDREJ 3 0.859 - - - - 0.859 - - - - - polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)
28. KCNJ3 ENSGALG00000012537 6 0.859 - - - - 0.859 - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
29. GLDC ENSGALG00000015053 103 0.859 - - - - 0.859 - - - - - glycine decarboxylase [Source:NCBI gene;Acc:374222]
30. CDH1 ENSGALG00000000608 6156 0.853 - - - - - - - - - 0.853 cadherin 3 [Source:NCBI gene;Acc:414845]
31. ENSGALG00000028211 ENSGALG00000028211 1 0.848 - - - - - - - 0.848 - -
32. MIP-3ALPHA MIP-3ALPHA 14 0.83 - - - - 0.830 - - - - -
33. BCMO1 BCMO1 35 0.825 - - - - 0.825 - - - - -
34. Mar-01 Mar-01 3 0.821 - - - - 0.821 - - - - -
35. GTF2A1L ENSGALG00000026747 13 0.814 - - - - - 0.814 - - - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
36. HSD11B2 ENSGALG00000028326 418 0.81 - - - - - - - - - 0.810 hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]
37. UPK3BL ENSGALG00000001885 1650 0.81 - - - - - - - - - 0.810 uroplakin 3B-like
38. OXCT1 ENSGALG00000014846 17 0.81 - - - - 0.810 - - - - - 3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:427190]
39. MDM1 ENSGALG00000009905 825 0.807 - - - - - - - - 0.807 - Mdm1 nuclear protein [Source:NCBI gene;Acc:417839]
40. WASF3 ENSGALG00000017103 50 0.806 - - - - - 0.806 - - - - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
41. PLAG1 ENSGALG00000015407 17 0.806 - - - - - - - 0.806 - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
42. FAM190B FAM190B 165 0.806 - - - - - - - 0.806 - -
43. APBB1IP ENSGALG00000007579 30 0.806 - - - - - - - 0.806 - - amyloid beta precursor protein binding family B member 1 interacting protein [Source:NCBI gene;Acc:420492]
44. TNFSF11 ENSGALG00000026163 26 0.803 - - - - 0.803 - - - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
45. DCLRE1B ENSGALG00000028626 48 0.803 - - - - - - - 0.803 - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
46. C8orf22 C8orf22 37 0.803 - - - - - - - 0.803 - -
47. KCTD8 ENSGALG00000014225 47 0.803 - - - - - - - 0.803 - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
48. EPCAM ENSGALG00000008969 10014 0.802 - - - - - - - - - 0.802 epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
49. PLEKHS1 ENSGALG00000020679 161 0.796 - - - - - - - 0.796 - - pleckstrin homology domain containing S1 [Source:HGNC Symbol;Acc:HGNC:26285]
50. C4orf19 ENSGALG00000027885 305 0.795 - - - - - - - - - 0.795 chromosome 4 open reading frame 19 [Source:HGNC Symbol;Acc:HGNC:25618]
51. CFAP74 ENSGALG00000001288 54 0.795 - - - - - - - 0.795 - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
52. LOC101750367 ENSGALG00000006693 5 0.795 - - - - - - - 0.795 - - BPI fold-containing family B member 4-like, transcript variant X3
53. KIAA1239 KIAA1239 263 0.794 - - - - - - - - - 0.794
54. ELF3 ENSGALG00000000616 217 0.794 - - - - - - - - - 0.794 E74 like ETS transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3318]
55. ENSGALG00000020592 ENSGALG00000020592 2 0.792 - - - - - - - 0.792 - -
56. PRRX2 ENSGALG00000028236 1990 0.792 - - - - - - - - 0.792 - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
57. ZNF804A ENSGALG00000023886 52 0.792 - - - - - - - 0.792 - - zinc finger protein 804A [Source:HGNC Symbol;Acc:HGNC:21711]
58. TACSTD2 ENSGALG00000010867 1 0.792 - - - - - - - 0.792 - - tumor-associated calcium signal transducer 2 [Source:NCBI gene;Acc:772378]
59. CETN3 ENSGALG00000014648 146 0.792 - - - - - - - 0.792 - - centrin 3 [Source:HGNC Symbol;Acc:HGNC:1868]
60. ENTPD7 ENSGALG00000023691 46 0.792 - - - - - - - 0.792 - - ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
61. TEX14 ENSGALG00000005037 3 0.792 - - - - - - - 0.792 - - testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737]
62. KLHL31 ENSGALG00000016309 1518 0.792 - - - - - - - 0.792 - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
63. GRIP1 ENSGALG00000009895 24 0.792 - - - - - - - 0.792 - - glutamate receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18708]
64. C1R ENSGALG00000014659 9 0.792 - - - - - - - 0.792 - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
65. GSTA3 ENSGALG00000016325 1254 0.788 - - - - - - - - - 0.788 glutathione S-transferase alpha 3 [Source:NCBI gene;Acc:414896]
66. MT1 MT1 218 0.786 - - - - - - - 0.786 - -
67. EYA1 ENSGALG00000043033 1048 0.782 - - - - - - - 0.782 - - EYA transcriptional coactivator and phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:3519]
68. POMGNT2 ENSGALG00000011518 36 0.78 - - - - - 0.780 - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
69. PAK3 ENSGALG00000008058 234 0.779 - - - - - - - 0.779 - - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
70. MAP2K3 ENSGALG00000041285 27 0.779 - - - - - - - 0.779 - - mitogen-activated protein kinase kinase 3 [Source:NCBI gene;Acc:416496]
71. LOC419390 ENSGALG00000001136 607 0.779 - - - - - - - 0.779 - - hairy and enhancer of split 5-like, transcript variant X1
72. MECOM ENSGALG00000032577 5062 0.778 - - - - - - - 0.778 - - MDS1 and EVI1 complex locus [Source:HGNC Symbol;Acc:HGNC:3498]
73. PRIMA1 ENSGALG00000020392 13 0.776 - - - - 0.776 - - - - - proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
74. DYNC2LI1 ENSGALG00000009954 38 0.774 - - - - - - - 0.774 - - dynein cytoplasmic 2 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:24595]
75. KATNB1 ENSGALG00000034373 195 0.774 - - - - - - - 0.774 - - katanin regulatory subunit B1 [Source:NCBI gene;Acc:415631]
76. TF ENSGALG00000006453 14007 0.772 - - - - - - - - - 0.772 transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
77. SLC6A1 ENSGALG00000004921 118 0.771 - - - - - - - 0.771 - - solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
78. TAGLN ENSGALG00000011902 12030 0.761 - - - - - 0.761 - - - - transgelin [Source:NCBI gene;Acc:396490]
79. FAH ENSGALG00000006482 589 0.761 - - - - - - - - - 0.761 fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
80. LOC769486 ENSGALG00000029144 20 0.756 - - - - - - - 0.756 - - scale keratin-like, transcript variant X1
81. FAM73B FAM73B 2 0.755 - - - - - 0.755 - - - -
82. GZMM ENSGALG00000015192 8 0.755 - - - - - 0.755 - - - - granzyme M
83. TANC2 26 0.755 - - - - - 0.755 - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
84. IKBKE ENSGALG00000013356 1 0.755 - - - - - 0.755 - - - - inhibitor of nuclear factor kappa B kinase subunit epsilon [Source:HGNC Symbol;Acc:HGNC:14552]
85. ANO3 ENSGALG00000013311 16 0.755 - - - - - 0.755 - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
86. SOHYE2L ENSGALG00000007118 1 0.755 - - - - - 0.755 - - - - sodium/hydrogen exchanger 2-like
87. FNDC7 ENSGALG00000001983 24 0.755 - - - - - 0.755 - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
88. IL10R2 IL10R2 72 0.755 - - - - - 0.755 - - - -
89. SLC4A5 ENSGALG00000032146 3 0.755 - - - - - 0.755 - - - - solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
90. ENSGALG00000023424 ENSGALG00000023424 1 0.755 - - - - - 0.755 - - - -
91. FAM43B ENSGALG00000026367 2 0.755 - - - - - 0.755 - - - - family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
92. GJA5 ENSGALG00000039452 1194 0.755 - - - - - - - 0.755 - - gap junction protein alpha 5 [Source:NCBI gene;Acc:396502]
93. HSD11B1L ENSGALG00000012860 4 0.755 - - - - - 0.755 - - - - hydroxysteroid 11-beta dehydrogenase 1 like [Source:NCBI gene;Acc:408034]
94. SYPL1 ENSGALG00000029006 126 0.755 - - - - - 0.755 - - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
95. MAL ENSGALG00000008552 4 0.755 - - - - - 0.755 - - - - mal, T cell differentiation protein [Source:NCBI gene;Acc:416707]
96. RNP ENSGALG00000028991 10 0.755 - - - - - 0.755 - - - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
97. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.755 - - - - - 0.755 - - - - homer scaffolding protein 3, transcript variant X4
98. BSND ENSGALG00000043998 11 0.755 - - - - - 0.755 - - - - barttin CLCNK type accessory beta subunit [Source:HGNC Symbol;Acc:HGNC:16512]
99. PLA2G6 ENSGALG00000012281 2 0.755 - - - - - 0.755 - - - - phospholipase A2 group VI [Source:NCBI gene;Acc:418028]
100. TFF2 ENSGALG00000016165 1 0.755 - - - - - 0.755 - - - - trefoil factor 2 [Source:HGNC Symbol;Acc:HGNC:11756]

There are 110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA