Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EMX1

Gene Name Gene ID Reads Annotation
EMX1 ENSGALG00000030516 408 empty spiracles homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3340]











Genes with expression patterns similar to EMX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EMX1 ENSGALG00000030516 408 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 empty spiracles homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3340]
2. ASTL ENSGALG00000037220 2775 3.941 - - - - - 0.913 0.701 0.802 0.737 0.788 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
3. GAL10 GAL10 33355 3.177 - - - - - 0.886 0.777 0.711 - 0.803
4. EMX2 ENSGALG00000009302 2103 2.377 - - - - 0.735 0.872 - 0.770 - - empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
5. GATA3 ENSGALG00000029270 854 1.715 - - - - - 0.873 - 0.842 - - GATA binding protein 3 [Source:NCBI gene;Acc:419106]
6. OTOG ENSGALG00000006208 17 1.673 - - - - - 0.888 - 0.785 - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
7. SMS ENSGALG00000016379 11607 1.616 - - - - - 0.817 - - - 0.799 spermine synthase [Source:NCBI gene;Acc:418602]
8. PAX2 ENSGALG00000005689 351 1.596 - - - - - - - 0.810 - 0.786 paired box 2 [Source:NCBI gene;Acc:395574]
9. PGO2 PGO2 589 1.582 - - - - - - - - 0.765 0.817
10. SCNN1B ENSGALG00000006202 87 1.569 - - - - 0.810 - - - - 0.759 sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
11. TSPAN8 ENSGALG00000010152 2666 1.539 - - - - - - - - 0.736 0.803 tetraspanin 8 [Source:NCBI gene;Acc:417854]
12. SIM1 ENSGALG00000015466 111 1.539 - - - - 0.790 - - 0.749 - - SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
13. TCF4 TCF4 29 1.498 - - - - - 0.706 - 0.792 - -
14. DCDC2 ENSGALG00000042454 2306 1.435 - - - - - - - 0.725 - 0.710 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
15. MSGN1 ENSGALG00000016469 17 0.887 - - - - 0.887 - - - - - mesogenin 1 [Source:NCBI gene;Acc:395419]
16. ENSGALG00000020103 ENSGALG00000020103 64 0.884 - - - - - - - 0.884 - -
17. SMG5 ENSGALG00000029918 8 0.871 - - - - - 0.871 - - - - SMG5, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:24644]
18. GLDC ENSGALG00000015053 103 0.859 - - - - 0.859 - - - - - glycine decarboxylase [Source:NCBI gene;Acc:374222]
19. KCNJ3 ENSGALG00000012537 6 0.859 - - - - 0.859 - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
20. PKDREJ 3 0.859 - - - - 0.859 - - - - - polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)
21. TRPV2 ENSGALG00000004519 7 0.859 - - - - 0.859 - - - - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
22. ENSGALG00000027164 ENSGALG00000027164 8 0.859 - - - - 0.859 - - - - -
23. CCDC84 ENSGALG00000007689 18 0.859 - - - - 0.859 - - - - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
24. gga-mir-6659 ENSGALG00000028216 6 0.859 - - - - 0.859 - - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
25. PLAC8 PLAC8 20 0.859 - - - - 0.859 - - - - -
26. GFRAL ENSGALG00000016296 4 0.859 - - - - - - - 0.859 - - GDNF family receptor alpha like [Source:HGNC Symbol;Acc:HGNC:32789]
27. ABCA9 ENSGALG00000021395 5 0.859 - - - - 0.859 - - - - - ATP binding cassette subfamily A member 9
28. DPP10 ENSGALG00000012156 20 0.859 - - - - 0.859 - - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
29. TAF5L ENSGALG00000011098 17 0.859 - - - - 0.859 - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
30. CDH1 ENSGALG00000000608 6156 0.853 - - - - - - - - - 0.853 cadherin 3 [Source:NCBI gene;Acc:414845]
31. ENSGALG00000028211 ENSGALG00000028211 1 0.848 - - - - - - - 0.848 - -
32. MIP-3ALPHA MIP-3ALPHA 14 0.83 - - - - 0.830 - - - - -
33. BCMO1 BCMO1 35 0.825 - - - - 0.825 - - - - -
34. Mar-01 Mar-01 3 0.821 - - - - 0.821 - - - - -
35. GTF2A1L ENSGALG00000026747 13 0.814 - - - - - 0.814 - - - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
36. OXCT1 ENSGALG00000014846 17 0.81 - - - - 0.810 - - - - - 3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:427190]
37. UPK3BL ENSGALG00000001885 1650 0.81 - - - - - - - - - 0.810 uroplakin 3B-like
38. HSD11B2 ENSGALG00000028326 418 0.81 - - - - - - - - - 0.810 hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]
39. MDM1 ENSGALG00000009905 825 0.807 - - - - - - - - 0.807 - Mdm1 nuclear protein [Source:NCBI gene;Acc:417839]
40. APBB1IP ENSGALG00000007579 30 0.806 - - - - - - - 0.806 - - amyloid beta precursor protein binding family B member 1 interacting protein [Source:NCBI gene;Acc:420492]
41. FAM190B FAM190B 165 0.806 - - - - - - - 0.806 - -
42. PLAG1 ENSGALG00000015407 17 0.806 - - - - - - - 0.806 - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
43. WASF3 ENSGALG00000017103 50 0.806 - - - - - 0.806 - - - - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
44. KCTD8 ENSGALG00000014225 47 0.803 - - - - - - - 0.803 - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
45. C8orf22 C8orf22 37 0.803 - - - - - - - 0.803 - -
46. DCLRE1B ENSGALG00000028626 48 0.803 - - - - - - - 0.803 - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
47. TNFSF11 ENSGALG00000026163 26 0.803 - - - - 0.803 - - - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
48. EPCAM ENSGALG00000008969 10014 0.802 - - - - - - - - - 0.802 epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
49. PLEKHS1 ENSGALG00000020679 161 0.796 - - - - - - - 0.796 - - pleckstrin homology domain containing S1 [Source:HGNC Symbol;Acc:HGNC:26285]
50. LOC101750367 ENSGALG00000006693 5 0.795 - - - - - - - 0.795 - - BPI fold-containing family B member 4-like, transcript variant X3
51. CFAP74 ENSGALG00000001288 54 0.795 - - - - - - - 0.795 - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
52. C4orf19 ENSGALG00000027885 305 0.795 - - - - - - - - - 0.795 chromosome 4 open reading frame 19 [Source:HGNC Symbol;Acc:HGNC:25618]
53. ELF3 ENSGALG00000000616 217 0.794 - - - - - - - - - 0.794 E74 like ETS transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3318]
54. KIAA1239 KIAA1239 263 0.794 - - - - - - - - - 0.794
55. C1R ENSGALG00000014659 9 0.792 - - - - - - - 0.792 - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
56. TEX14 ENSGALG00000005037 3 0.792 - - - - - - - 0.792 - - testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737]
57. KLHL31 ENSGALG00000016309 1518 0.792 - - - - - - - 0.792 - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
58. GRIP1 ENSGALG00000009895 24 0.792 - - - - - - - 0.792 - - glutamate receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18708]
59. ENTPD7 ENSGALG00000023691 46 0.792 - - - - - - - 0.792 - - ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
60. CETN3 ENSGALG00000014648 146 0.792 - - - - - - - 0.792 - - centrin 3 [Source:HGNC Symbol;Acc:HGNC:1868]
61. TACSTD2 ENSGALG00000010867 1 0.792 - - - - - - - 0.792 - - tumor-associated calcium signal transducer 2 [Source:NCBI gene;Acc:772378]
62. ZNF804A ENSGALG00000023886 52 0.792 - - - - - - - 0.792 - - zinc finger protein 804A [Source:HGNC Symbol;Acc:HGNC:21711]
63. PRRX2 ENSGALG00000028236 1990 0.792 - - - - - - - - 0.792 - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
64. ENSGALG00000020592 ENSGALG00000020592 2 0.792 - - - - - - - 0.792 - -
65. GSTA3 ENSGALG00000016325 1254 0.788 - - - - - - - - - 0.788 glutathione S-transferase alpha 3 [Source:NCBI gene;Acc:414896]
66. MT1 MT1 218 0.786 - - - - - - - 0.786 - -
67. EYA1 ENSGALG00000043033 1048 0.782 - - - - - - - 0.782 - - EYA transcriptional coactivator and phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:3519]
68. POMGNT2 ENSGALG00000011518 36 0.78 - - - - - 0.780 - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
69. LOC419390 ENSGALG00000001136 607 0.779 - - - - - - - 0.779 - - hairy and enhancer of split 5-like, transcript variant X1
70. MAP2K3 ENSGALG00000041285 27 0.779 - - - - - - - 0.779 - - mitogen-activated protein kinase kinase 3 [Source:NCBI gene;Acc:416496]
71. PAK3 ENSGALG00000008058 234 0.779 - - - - - - - 0.779 - - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
72. MECOM ENSGALG00000032577 5062 0.778 - - - - - - - 0.778 - - MDS1 and EVI1 complex locus [Source:HGNC Symbol;Acc:HGNC:3498]
73. PRIMA1 ENSGALG00000020392 13 0.776 - - - - 0.776 - - - - - proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
74. KATNB1 ENSGALG00000034373 195 0.774 - - - - - - - 0.774 - - katanin regulatory subunit B1 [Source:NCBI gene;Acc:415631]
75. DYNC2LI1 ENSGALG00000009954 38 0.774 - - - - - - - 0.774 - - dynein cytoplasmic 2 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:24595]
76. TF ENSGALG00000006453 14007 0.772 - - - - - - - - - 0.772 transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
77. SLC6A1 ENSGALG00000004921 118 0.771 - - - - - - - 0.771 - - solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
78. FAH ENSGALG00000006482 589 0.761 - - - - - - - - - 0.761 fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
79. TAGLN ENSGALG00000011902 12030 0.761 - - - - - 0.761 - - - - transgelin [Source:NCBI gene;Acc:396490]
80. LOC769486 ENSGALG00000029144 20 0.756 - - - - - - - 0.756 - - scale keratin-like, transcript variant X1
81. ENSGALG00000027467 ENSGALG00000027467 1 0.755 - - - - - 0.755 - - - -
82. ENSGALG00000026365 ENSGALG00000026365 1 0.755 - - - - - 0.755 - - - -
83. PKHD1 ENSGALG00000042136 8 0.755 - - - - - 0.755 - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
84. PPP1R3E ENSGALG00000003492, ENSGALG00000041047 376 0.755 - - - - - 0.755 - - - - protein phosphatase 1 regulatory subunit 3E [Source:HGNC Symbol;Acc:HGNC:14943]
85. HPRTL ENSGALG00000005361 31 0.755 - - - - - 0.755 - - - - hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
86. ALPL ENSGALG00000023542 6 0.755 - - - - - 0.755 - - - - alkaline phosphatase, liver/bone/kidney [Source:NCBI gene;Acc:396317]
87. ENSGALG00000009777 ENSGALG00000009777 3 0.755 - - - - - 0.755 - - - -
88. HINT2 ENSGALG00000027418 10 0.755 - - - - - 0.755 - - - - histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18344]
89. KBTBD11 ENSGALG00000022887 168 0.755 - - - - - 0.755 - - - - kelch repeat and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:29104]
90. SRMS ENSGALG00000005852 174 0.755 - - - - - 0.755 - - - - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
91. NANOG ENSGALG00000027772 89 0.755 - - - - - 0.755 - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
92. TLR7 ENSGALG00000016590 6 0.755 - - - - - 0.755 - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
93. MYH13 4 0.755 - - - - - 0.755 - - - - myosin, heavy chain 13, skeletal muscle
94. LRRC8A ENSGALG00000004573 2 0.755 - - - - - 0.755 - - - - leucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]
95. TFF2 ENSGALG00000016165 1 0.755 - - - - - 0.755 - - - - trefoil factor 2 [Source:HGNC Symbol;Acc:HGNC:11756]
96. FOXRED2 ENSGALG00000012530 36 0.755 - - - - - 0.755 - - - - FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
97. PLA2G6 ENSGALG00000012281 2 0.755 - - - - - 0.755 - - - - phospholipase A2 group VI [Source:NCBI gene;Acc:418028]
98. BSND ENSGALG00000043998 11 0.755 - - - - - 0.755 - - - - barttin CLCNK type accessory beta subunit [Source:HGNC Symbol;Acc:HGNC:16512]
99. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.755 - - - - - 0.755 - - - - homer scaffolding protein 3, transcript variant X4
100. RNP ENSGALG00000028991 10 0.755 - - - - - 0.755 - - - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]

There are 110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA