Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EIF3E

Gene Name Gene ID Reads Annotation
EIF3E ENSGALG00000037067 36561 eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]











Genes with expression patterns similar to EIF3E

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EIF3E ENSGALG00000037067 36561 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
2. ENSGALG00000011687 ENSGALG00000011687 4553 1.547 - - - - 0.830 - - - 0.717 -
3. CARKD CARKD 2914 1.546 - - - - - 0.716 - 0.830 - -
4. GBAS 18453 1.508 - - - - 0.724 0.784 - - - - glioblastoma amplified sequence
5. BET1 ENSGALG00000024485 2451 1.434 - - - - - 0.731 - - - 0.703 Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
6. SEC61G ENSGALG00000037863 83362 1.424 - - - - 0.702 - - - - 0.722 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
7. HSPD1 ENSGALG00000008094 40870 0.994 - - - - - - 0.994 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
8. PDAP1 ENSGALG00000036552 28881 0.986 - - - - - - 0.986 - - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
9. COX7B ENSGALG00000007863 59194 0.984 - - - - - - 0.984 - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
10. RBM5 30998 0.983 - - - - - - 0.983 - - - RNA binding motif protein 5, transcript variant X1
11. FAM72A ENSGALG00000000791 17723 0.982 - - - - - - 0.982 - - - family with sequence similarity 72 member A, transcript variant X1
12. GDI2 ENSGALG00000008169 67151 0.982 - - - - - - 0.982 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
13. UBLCP1 ENSGALG00000003672 9332 0.981 - - - - - - 0.981 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
14. ISY1 ENSGALG00000005012 7477 0.981 - - - - - - 0.981 - - - ISY1 splicing factor homolog
15. CAPZB ENSGALG00000004034 19630 0.98 - - - - - - 0.980 - - - capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
16. EPCAM ENSGALG00000008969 10014 0.98 - - - - - - 0.980 - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
17. SEC62 ENSGALG00000009379 15745 0.98 - - - - - - 0.980 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
18. ZWILCH ENSGALG00000007736 4939 0.98 - - - - - - 0.980 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
19. HINT3 ENSGALG00000044342 5674 0.979 - - - - - - 0.979 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
20. POLR2L ENSGALG00000006841 33915 0.979 - - - - - - 0.979 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
21. MAP3K4 ENSGALG00000020003 6378 0.978 - - - - - - 0.978 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
22. PSIP1 ENSGALG00000015105 8322 0.978 - - - - - - 0.978 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
23. ARL14EP ENSGALG00000012139 4690 0.978 - - - - - - 0.978 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
24. SUPT4H1 ENSGALG00000000944 8675 0.978 - - - - - - 0.978 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
25. ELP3 ENSGALG00000016624 4483 0.978 - - - - - - 0.978 - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
26. NAE1 ENSGALG00000038957 13777 0.977 - - - - - - 0.977 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
27. RBM38 ENSGALG00000026081 7115 0.977 - - - - - - 0.977 - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
28. MTRR ENSGALG00000039424 3197 0.977 - - - - - - 0.977 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
29. IRX2 ENSGALG00000013193 2170 0.976 - - - - - - 0.976 - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
30. GRSF1 2406 0.975 - - - - - - 0.975 - - - G-rich RNA sequence binding factor 1, transcript variant X2
31. PPP2R3B ENSGALG00000016702 1538 0.975 - - - - - - 0.975 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
32. D1A D1A 1026 0.975 - - - - - - 0.975 - - -
33. C5orf22 ENSGALG00000012909 3537 0.974 - - - - - - 0.974 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
34. TYMS ENSGALG00000014897 20484 0.973 - - - - - - 0.973 - - - thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
35. DDX21 ENSGALG00000004144 13105 0.972 - - - - 0.972 - - - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
36. ZFP91 ENSGALG00000007287 13681 0.972 - - - - - - 0.972 - - - ZFP91 zinc finger protein
37. PNRC1 ENSGALG00000015780 75894 0.971 - - - - - - 0.971 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
38. SELT SELT 25524 0.971 - - - - - - - 0.971 - -
39. BMP7 ENSGALG00000007668 6645 0.969 - - - - - - 0.969 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
40. ARMC1 ENSGALG00000036567 5476 0.968 - - - - - - 0.968 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
41. CDC42SE1 ENSGALG00000028119 14813 0.967 - - - - - - 0.967 - - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
42. PTRHD1 ENSGALG00000016610 3636 0.966 - - - - - - 0.966 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
43. HSP90B1 ENSGALG00000033789 58910 0.937 - - - - - - 0.937 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
44. EIF3F ENSGALG00000005326 76059 0.929 - - - - - - 0.929 - - - eukaryotic translation initiation factor 3 subunit F
45. PTPRU ENSGALG00000031440 1357 0.922 - - - - - - - - 0.922 - protein tyrosine phosphatase, receptor type U [Source:NCBI gene;Acc:395153]
46. MLF2 ENSGALG00000014468 45953 0.921 - - - - - - 0.921 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
47. WBP4 ENSGALG00000016949 5858 0.913 - - - - 0.913 - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
48. NDUFB9 ENSGALG00000042242 115459 0.913 - - - - 0.913 - - - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
49. SRSF3 ENSGALG00000000533 51281 0.912 - - - - - - - 0.912 - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
50. ANO1 ENSGALG00000041808 5149 0.911 - - - - - - - - 0.911 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
51. CTDP1 ENSGALG00000031461 4818 0.904 - - - - - - - 0.904 - - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
52. RPL27A ENSGALG00000005948 363481 0.901 - - - - - - 0.901 - - - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
53. NUP188 ENSGALG00000043394 9288 0.896 - - - - - - - 0.896 - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
54. TRPC4 ENSGALG00000017044 300 0.886 - - - - - - - - 0.886 - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
55. MRPS21 ENSGALG00000000456 35298 0.881 - - - - 0.881 - - - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
56. TAX1BP3 ENSGALG00000004618 35172 0.878 - - - - - - 0.878 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
57. SUMO2 ENSGALG00000007971 46283 0.871 - - - - - - - 0.871 - - small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:770125]
58. PRPS2 ENSGALG00000016592 165 0.863 - - - - - - - - 0.863 - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
59. RBM45 ENSGALG00000009202 6057 0.863 - - - - - - - - 0.863 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
60. OSBPL11 ENSGALG00000012059 2523 0.857 - - - - - - - - 0.857 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
61. PDE6D ENSGALG00000033062 20177 0.852 - - - - 0.852 - - - - - phosphodiesterase 6D [Source:HGNC Symbol;Acc:HGNC:8788]
62. UBTD2 ENSGALG00000037395 539 0.85 - - - - - 0.850 - - - - ubiquitin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24463]
63. ENSGALG00000021397 ENSGALG00000021397 51155 0.849 - - - - 0.849 - - - - -
64. G6PC2 ENSGALG00000010899 260 0.848 - - - - - - - - 0.848 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
65. TPP1 52 0.839 - - - - - - - - 0.839 - tripeptidyl peptidase 1
66. MRPS17 ENSGALG00000002379 30243 0.838 - - - - - - - 0.838 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
67. ARHGAP11A ENSGALG00000009731 6817 0.837 - - - - - - - 0.837 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
68. RPS15A ENSGALG00000006771 287037 0.836 - - - - 0.836 - - - - - ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
69. DACT1 ENSGALG00000012023 1008 0.836 - - - - - - - - 0.836 - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
70. EIF3D ENSGALG00000012529 40887 0.834 - - - - - - - 0.834 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
71. ATL1 ENSGALG00000012339 3789 0.834 - - - - - - - 0.834 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
72. CHTOP ENSGALG00000042129 24112 0.833 - - - - - - - 0.833 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
73. RPL15 ENSGALG00000011290 415571 0.832 - - - - 0.832 - - - - - ribosomal protein L15 [Source:NCBI gene;Acc:428442]
74. TMTC2 ENSGALG00000010975 7040 0.832 - - - - - - - 0.832 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
75. PDCD2L 4843 0.832 - - - - - - - 0.832 - - programmed cell death 2-like
76. FAM125B FAM125B 2953 0.832 - - - - - - - 0.832 - -
77. RIC8A ENSGALG00000004191 6094 0.832 - - - - - - - 0.832 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
78. CHMP5 ENSGALG00000013160 13347 0.832 - - - - - - - 0.832 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
79. RNF113A ENSGALG00000000538 3985 0.832 - - - - - - - 0.832 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
80. IGF1R ENSGALG00000040651 772 0.831 - - - - 0.831 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
81. PGM1 ENSGALG00000011016 3391 0.831 - - - - - - - 0.831 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
82. ENSGALG00000010034 ENSGALG00000010034 3293 0.831 - - - - - - - 0.831 - -
83. DDX55 ENSGALG00000003298 2315 0.831 - - - - 0.831 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
84. JKAMP ENSGALG00000012009 5781 0.831 - - - - - - - 0.831 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
85. DDX24 ENSGALG00000010884 5485 0.831 - - - - - - - 0.831 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
86. HBXIP HBXIP 8637 0.831 - - - - - - - 0.831 - -
87. UBALD1 ENSGALG00000007619 8536 0.831 - - - - - - - 0.831 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
88. MMADHC ENSGALG00000012473 9026 0.831 - - - - - - - 0.831 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
89. MADD ENSGALG00000008181 2273 0.83 - - - - - - - 0.830 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
90. GGA3 ENSGALG00000007992 3566 0.83 - - - - - - - 0.830 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
91. SSPN ENSGALG00000014042 638 0.83 - - - - 0.830 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
92. CASP3 ENSGALG00000010638 11572 0.83 - - - - - - - 0.830 - - caspase 3 [Source:NCBI gene;Acc:395476]
93. SCLT1 2397 0.83 - - - - - - - 0.830 - - sodium channel and clathrin linker 1, transcript variant X6
94. EAPP ENSGALG00000010007 5080 0.83 - - - - 0.830 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
95. CTSZ ENSGALG00000007462 630 0.83 - - - - 0.830 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
96. RAP1A ENSGALG00000001476 5287 0.83 - - - - - - - - 0.830 - RAP1A, member of RAS oncogene family
97. RRN3 ENSGALG00000041989 3934 0.83 - - - - - - - 0.830 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
98. FXN ENSGALG00000015108 1867 0.829 - - - - - - - 0.829 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
99. REST 2394 0.829 - - - - 0.829 - - - - - RE1 silencing transcription factor
100. NPFF1 NPFF1 3177 0.829 - - - - - - - 0.829 - -

There are 294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA