Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EIF3D

Gene Name Gene ID Reads Annotation
EIF3D ENSGALG00000012529 40887 eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]











Genes with expression patterns similar to EIF3D

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EIF3D ENSGALG00000012529 40887 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
2. EFTUD2 ENSGALG00000000988 17913 0.999 - - - - - - 0.999 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
3. TMTC2 ENSGALG00000010975 7040 0.998 - - - - - - - 0.998 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
4. RNF141 ENSGALG00000029586 4962 0.998 - - - - - - 0.998 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
5. JKAMP ENSGALG00000012009 5781 0.998 - - - - - - - 0.998 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
6. PDCD2L 4843 0.998 - - - - - - - 0.998 - - programmed cell death 2-like
7. ZEB1 ENSGALG00000007260 9277 0.998 - - - - - - 0.998 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
8. UBALD1 ENSGALG00000007619 8536 0.998 - - - - - - - 0.998 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
9. INTS4 ENSGALG00000000091 5965 0.998 - - - - - - 0.998 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
10. RIC8A ENSGALG00000004191 6094 0.998 - - - - - - - 0.998 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
11. CCNYL1 ENSGALG00000008485 11958 0.998 - - - - - - 0.998 - - - cyclin Y like 1
12. GGA3 ENSGALG00000007992 3566 0.997 - - - - - - - 0.997 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
13. CARKD CARKD 2914 0.997 - - - - - - - 0.997 - -
14. MADD ENSGALG00000008181 2273 0.997 - - - - - - - 0.997 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
15. CTBPL ENSGALG00000007642 14238 0.997 - - - - - - 0.997 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
16. MATR3 ENSGALG00000002478 12793 0.997 - - - - - - 0.997 - - - matrin 3 [Source:NCBI gene;Acc:373948]
17. SCLT1 2397 0.997 - - - - - - - 0.997 - - sodium channel and clathrin linker 1, transcript variant X6
18. NPFF1 NPFF1 3177 0.997 - - - - - - - 0.997 - -
19. ENSGALG00000010034 ENSGALG00000010034 3293 0.997 - - - - - - - 0.997 - -
20. CHMP5 ENSGALG00000013160 13347 0.997 - - - - - - - 0.997 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
21. RRN3 ENSGALG00000041989 3934 0.997 - - - - - - - 0.997 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
22. HBXIP HBXIP 8637 0.997 - - - - - - - 0.997 - -
23. FAM125B FAM125B 2953 0.997 - - - - - - - 0.997 - -
24. ATL1 ENSGALG00000012339 3789 0.997 - - - - - - - 0.997 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
25. RNF113A ENSGALG00000000538 3985 0.997 - - - - - - - 0.997 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
26. HDAC8 ENSGALG00000004825 12066 0.997 - - - - - - 0.997 - - - histone deacetylase 8, transcript variant X2
27. FAM192A ENSGALG00000021473 10213 0.996 - - - - - - 0.996 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
28. PGM1 ENSGALG00000011016 3391 0.996 - - - - - - - 0.996 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
29. FXN ENSGALG00000015108 1867 0.996 - - - - - - - 0.996 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
30. MCM3 ENSGALG00000016676 16934 0.996 - - - - - - 0.996 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
31. KIAA0895L 1739 0.996 - - - - - - - 0.996 - - KIAA0895 like, transcript variant X4
32. LRPAP1 ENSGALG00000015612 3526 0.996 - - - - - - 0.996 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
33. WDHD1 ENSGALG00000012199 3570 0.996 - - - - - - 0.996 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
34. C9orf64 ENSGALG00000012589 6097 0.996 - - - - - - 0.996 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
35. RAB12 ENSGALG00000033608 14160 0.996 - - - - - - 0.996 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
36. EIF1B ENSGALG00000038646 9508 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
37. YTHDC2 2266 0.996 - - - - - - - 0.996 - - YTH domain containing 2, transcript variant X3
38. TMEM18 ENSGALG00000028744 11779 0.996 - - - - - - 0.996 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
39. VSX1 ENSGALG00000037576 1517 0.996 - - - - - - 0.996 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
40. USPL1 ENSGALG00000017079 6263 0.996 - - - - - - 0.996 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
41. FAT1 ENSGALG00000013579 6030 0.995 - - - - - - 0.995 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
42. CHTOP ENSGALG00000042129 24112 0.995 - - - - - - - 0.995 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
43. RBFA ENSGALG00000036067 6542 0.995 - - - - - - - 0.995 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
44. CORO1C ENSGALG00000004901 7055 0.995 - - - - - - 0.995 - - - coronin 1C [Source:NCBI gene;Acc:416893]
45. DDX24 ENSGALG00000010884 5485 0.995 - - - - - - - 0.995 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
46. DAPK3 ENSGALG00000037733 6215 0.995 - - - - - - 0.995 - - - death-associated protein kinase 3, transcript variant X2
47. Sep-06 Sep-06 5961 0.995 - - - - - - 0.995 - - -
48. ARHGAP32 ENSGALG00000043511 7916 0.995 - - - - - - 0.995 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
49. CASP3 ENSGALG00000010638 11572 0.994 - - - - - - - 0.994 - - caspase 3 [Source:NCBI gene;Acc:395476]
50. CXCL12 ENSGALG00000041346 4128 0.994 - - - - - - 0.994 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
51. GPC1 ENSGALG00000040316 13364 0.993 - - - - - - 0.993 - - - glypican 1 [Source:NCBI gene;Acc:424770]
52. CNOT6 ENSGALG00000034316 10496 0.992 - - - - - - 0.992 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
53. C15H12ORF49 C15H12ORF49 13250 0.992 - - - - - - 0.992 - - -
54. MCM6 ENSGALG00000012348 12523 0.992 - - - - - - 0.992 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
55. DNAJC7 ENSGALG00000042796 14597 0.99 - - - - - - 0.990 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
56. SLC9A3R1 ENSGALG00000007650 13053 0.988 - - - - - - 0.988 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
57. ARHGAP11A ENSGALG00000009731 6817 0.988 - - - - - - - 0.988 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
58. IFT20 ENSGALG00000005707 23973 0.987 - - - - - - 0.987 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
59. NECAP1 ENSGALG00000037656 5181 0.986 - - - - - - - 0.986 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
60. UBE2L3 ENSGALG00000036739 21401 0.985 - - - - - - 0.985 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
61. MMADHC ENSGALG00000012473 9026 0.985 - - - - - - - 0.985 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
62. DHFR ENSGALG00000026757 18478 0.983 - - - - - - 0.983 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
63. RAP1B ENSGALG00000009927 26562 0.983 - - - - - - 0.983 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
64. PDLIM4 ENSGALG00000039872 7823 0.982 - - - - - - 0.982 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
65. RAB11A ENSGALG00000007615 9154 0.981 - - - - 0.981 - - - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
66. MRPS17 ENSGALG00000002379 30243 0.981 - - - - - - - 0.981 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
67. LRPPRC ENSGALG00000009967 17091 0.981 - - - - - - 0.981 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
68. HNRNPH3 ENSGALG00000003947 28724 0.98 - - - - - - 0.980 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
69. PPIG ENSGALG00000009839 24114 0.979 - - - - - - 0.979 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
70. ZNF644 ENSGALG00000034253 28348 0.978 - - - - - - 0.978 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
71. CDCA4 ENSGALG00000011692 10381 0.977 - - - - - - 0.977 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
72. NDUFA2 ENSGALG00000040626 27899 0.974 - - - - - - - 0.974 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
73. SMARCE1 ENSGALG00000003882 49063 0.971 - - - - - - 0.971 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
74. NOC4L ENSGALG00000002272 9644 0.97 - - - - - - - 0.970 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
75. SMC3 ENSGALG00000008585 16618 0.968 - - - - - - - 0.968 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
76. PRKG1 ENSGALG00000003805 4654 0.965 - - - - - - - 0.965 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
77. SQLE ENSGALG00000036915 4172 0.964 - - - - - - - 0.964 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
78. PPA1 ENSGALG00000004442 33355 0.961 - - - - 0.961 - - - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
79. BSDC1 ENSGALG00000003405 3701 0.957 - - - - - - - 0.957 - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
80. MAEA ENSGALG00000013310 13230 0.955 - - - - 0.955 - - - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
81. CENPP ENSGALG00000004687 6707 0.953 - - - - - - - 0.953 - - centromere protein P [Source:NCBI gene;Acc:415952]
82. GCLM ENSGALG00000005782 15789 0.952 - - - - - - - 0.952 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
83. HNRNPM ENSGALG00000000377 40684 0.952 - - - - - - 0.952 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
84. ALYREF ENSGALG00000007237 48479 0.939 - - - - - - - 0.939 - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
85. COL4A6 ENSGALG00000008266 6374 0.931 - - - - - - - 0.931 - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
86. MRPL17 ENSGALG00000002605 46508 0.917 - - - - 0.917 - - - - - mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
87. COPS4 ENSGALG00000011130 21515 0.903 - - - - 0.903 - - - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
88. UTP11L UTP11L 11927 0.902 - - - - - - - 0.902 - -
89. SEC11A ENSGALG00000037553 32123 0.896 - - - - - - - 0.896 - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
90. HMGN2 HMGN2 158543 0.883 - - - - - - - 0.883 - -
91. CCDC59 ENSGALG00000028648 9272 0.872 - - - - - - - 0.872 - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
92. MAPRE1 ENSGALG00000006657 64346 0.862 - - - - - - - 0.862 - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
93. PITX2 ENSGALG00000042492 20419 0.859 - - - - - - - 0.859 - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
94. PIK3IP1 ENSGALG00000006942 8388 0.849 - - - - - - - 0.849 - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
95. SELT SELT 25524 0.848 - - - - - - - 0.848 - -
96. AP1M1 ENSGALG00000003959 31761 0.847 - - - - - - - 0.847 - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
97. PRPS1 ENSGALG00000004908 27994 0.847 - - - - - - - 0.847 - - phosphoribosyl pyrophosphate synthetase 1
98. CHCHD2 ENSGALG00000002495 99536 0.84 - - - - 0.840 - - - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
99. NDUFA4 ENSGALG00000025999 53323 0.835 - - - - - - - 0.835 - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
100. EIF3E ENSGALG00000037067 36561 0.834 - - - - - - - 0.834 - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]

There are 99 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA