Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EIF3B

Gene Name Gene ID Reads Annotation
EIF3B ENSGALG00000040999 49971 eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]











Genes with expression patterns similar to EIF3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EIF3B ENSGALG00000040999 49971 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
2. G3BP1 ENSGALG00000004160 36795 2.286 - 0.703 - - 0.799 - 0.784 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
3. Mar-05 Mar-05 6330 1.705 - - - - 0.881 - 0.824 - - -
4. GABARAPL2 ENSGALG00000003208 9195 1.704 - - - - 0.842 - 0.862 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
5. DLD ENSGALG00000007931 11011 1.697 - - - - 0.830 - 0.867 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
6. SPEN ENSGALG00000036932 9688 1.679 - - - - 0.881 - 0.798 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
7. PSMD3 ENSGALG00000033162 25615 1.67 - - - - 0.874 - 0.796 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
8. NEK6 ENSGALG00000001118 20333 1.661 - - - - 0.855 - 0.806 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
9. CEP78 ENSGALG00000015179 5227 1.659 - - - - 0.882 - 0.777 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
10. GSPT1 15580 1.657 - - - - 0.876 - 0.781 - - - G1 to S phase transition 1, transcript variant X1
11. CENPP ENSGALG00000004687 6707 1.651 - - - - 0.857 - 0.794 - - - centromere protein P [Source:NCBI gene;Acc:415952]
12. HARS ENSGALG00000035080 11602 1.645 - - - - 0.851 - 0.794 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
13. LGALS1 ENSGALG00000012420 13993 1.636 - - - - 0.855 - 0.781 - - - galectin 1 [Source:NCBI gene;Acc:396491]
14. GSTO1 ENSGALG00000008409 7561 1.632 - - - - 0.875 - 0.757 - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
15. DNAJC9 ENSGALG00000002701 19249 1.628 - - - - 0.859 - 0.769 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
16. RAD23B ENSGALG00000015540 10828 1.624 - - - - 0.845 - 0.779 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
17. LMAN2 ENSGALG00000033232 11740 1.608 - - - - 0.816 - 0.792 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
18. TAF3 ENSGALG00000006731 15569 1.594 - - - - 0.833 - 0.761 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
19. TMCO1 ENSGALG00000033460 22822 1.587 - - - - - - 0.747 0.840 - - transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]
20. SVIL ENSGALG00000007331 12032 1.585 - - - - 0.823 - 0.762 - - - supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
21. MARC1 ENSGALG00000009453 5675 1.565 - - - - 0.852 - 0.713 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
22. LOC426385 ENSGALG00000026301 2703 1.556 - - - - 0.845 - 0.711 - - - serine/threonine kinase 35-like, transcript variant X2
23. FUNDC2 ENSGALG00000029585 9334 1.549 - - - - 0.830 - 0.719 - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
24. CSNK2A1 ENSGALG00000006197 41409 1.548 - - - - 0.810 - 0.738 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
25. CHMP5 ENSGALG00000013160 13347 1.54 - - - - 0.810 - 0.730 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
26. NUTF2 ENSGALG00000001602 32832 1.526 - - 0.723 - - - 0.803 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
27. UBE2J2 ENSGALG00000001848 6527 1.517 - - - - - - 0.755 - 0.762 - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
28. API5 ENSGALG00000037968 18265 1.517 - - - - - - 0.776 0.741 - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
29. ZADH2 ENSGALG00000022882 11790 1.506 - - - - 0.738 - 0.768 - - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
30. UMPS ENSGALG00000011770 11331 1.499 - - - - 0.786 - 0.713 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
31. DDX27 ENSGALG00000006974 18388 1.487 - - - - 0.744 - 0.743 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
32. ELOVL5 ENSGALG00000016314 18163 1.462 - - - - 0.756 - 0.706 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
33. MTX2 ENSGALG00000009264 17304 1.455 - - - - 0.753 - - 0.702 - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
34. HDAC8 ENSGALG00000004825 12066 0.906 - - - - 0.906 - - - - - histone deacetylase 8, transcript variant X2
35. CDCA4 ENSGALG00000011692 10381 0.901 - - - - 0.901 - - - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
36. THRAP3 ENSGALG00000002144 21958 0.897 - - - - - - 0.897 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
37. DKC1 ENSGALG00000005054 30350 0.896 - - - - - - 0.896 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
38. SSBP1 ENSGALG00000012876 34256 0.895 - - - - - - 0.895 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
39. SOD1 ENSGALG00000015844 35836 0.893 - - - - - - 0.893 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
40. TXNDC17 ENSGALG00000027950 45004 0.893 - - - - - - 0.893 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
41. USMG5 ENSGALG00000034645 33263 0.892 - - - - 0.892 - - - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
42. CSE1L ENSGALG00000004707 20653 0.886 - - - - - - 0.886 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
43. MORF4L1 ENSGALG00000008146 29940 0.886 - - - - - - 0.886 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
44. RSL1D1 ENSGALG00000033690 13638 0.885 - - - - - - 0.885 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
45. EIF2S1 ENSGALG00000009565 63906 0.885 - - - - - - 0.885 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
46. SNRNP27 ENSGALG00000013883 22212 0.883 - - - - - - 0.883 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
47. ENSGALG00000017396 ENSGALG00000017396 9028 0.879 - - - - - - 0.879 - - -
48. UTP6 ENSGALG00000003260 4909 0.877 - - - - 0.877 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
49. MRPL21 ENSGALG00000004362 20796 0.874 - - - - 0.874 - - - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
50. PLRG1 ENSGALG00000009257 8613 0.873 - - - - - - 0.873 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
51. MRPL20 ENSGALG00000001542 28764 0.873 - - - - - - 0.873 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
52. DKK3 ENSGALG00000005551 7807 0.871 - - - - 0.871 - - - - - dickkopf WNT signaling pathway inhibitor 3 [Source:NCBI gene;Acc:396023]
53. HMGB2 ENSGALG00000010745 89235 0.871 - - - - - - 0.871 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
54. KIF2A ENSGALG00000014737 16391 0.871 - - - - 0.871 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
55. RUVBL1 ENSGALG00000005931 9379 0.869 - - - - - - 0.869 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
56. DENR ENSGALG00000003795 30805 0.868 - - - - 0.868 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
57. MEF2BNB MEF2BNB 5578 0.868 - - - - 0.868 - - - - -
58. NDUFS4 ENSGALG00000028026 25876 0.867 - - - - 0.867 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
59. DYNLT1 ENSGALG00000019979 38176 0.867 - - - - - - 0.867 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
60. YWHAZ ENSGALG00000031387 84985 0.867 - - - - - - 0.867 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
61. BLMH ENSGALG00000004259 36907 0.867 - - - - - - 0.867 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
62. MINOS1 ENSGALG00000004039 37740 0.866 - - - - 0.866 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
63. MRPL40 ENSGALG00000001587 20893 0.866 - - - - - - 0.866 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
64. SSR3 ENSGALG00000028683 24334 0.866 - - - - - - 0.866 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
65. EIF4A2 ENSGALG00000008684 58507 0.866 - - - - - - 0.866 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
66. CDCA3 ENSGALG00000014513 17047 0.865 - - - - 0.865 - - - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
67. VMP1 ENSGALG00000005160 12859 0.864 - - - - 0.864 - - - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
68. PARP1 ENSGALG00000009228 39433 0.864 - - - - - - 0.864 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
69. TMEM167A ENSGALG00000027332 13862 0.864 - - - - - - 0.864 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
70. MYBL2 ENSGALG00000003503 15875 0.864 - - - - 0.864 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
71. PPP1R7 ENSGALG00000031766 22187 0.863 - - - - - - 0.863 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
72. PAXIP1 ENSGALG00000036064 3120 0.863 - - - - - - 0.863 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
73. SEC11A ENSGALG00000037553 32123 0.863 - - - - - - 0.863 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
74. XRN2 ENSGALG00000008372 22164 0.862 - - - - - - 0.862 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
75. WDR51B WDR51B 5757 0.862 - - - - - - 0.862 - - -
76. SMC4 ENSGALG00000009553 15715 0.862 - - - - - - 0.862 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
77. R3HDM1 ENSGALG00000012246 6580 0.861 - - - - - - 0.861 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
78. STK4 ENSGALG00000004098 11366 0.861 - - - - 0.861 - - - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
79. TXN2 ENSGALG00000012532 12518 0.86 - - - - - - 0.860 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
80. SIVA1 ENSGALG00000011619 15130 0.86 - - - - - - 0.860 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
81. MRPS26 ENSGALG00000014118 27422 0.86 - - - - 0.860 - - - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
82. SLMO2 SLMO2 9207 0.859 - - - - 0.859 - - - - -
83. RRP36 ENSGALG00000028056 7560 0.858 - - - - - - 0.858 - - - ribosomal RNA processing 36
84. SFXN5 ENSGALG00000016094 2678 0.858 - - - - 0.858 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
85. LIMD2 ENSGALG00000000529 30617 0.858 - - - - - - 0.858 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
86. RHOT1 ENSGALG00000003397 5149 0.858 - - - - 0.858 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
87. SRP19 ENSGALG00000000218 14207 0.858 - - - - 0.858 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
88. TFDP1 ENSGALG00000016823 17019 0.858 - - - - - - 0.858 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
89. ZDHHC6 ENSGALG00000008870 16575 0.858 - - - - 0.858 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
90. TFB2M ENSGALG00000010651 4374 0.858 - - - - - - 0.858 - - - transcription factor B2, mitochondrial
91. TM9SF3 ENSGALG00000005534 15290 0.857 - - - - 0.857 - - - - - transmembrane 9 superfamily member 3
92. NDUFC2 ENSGALG00000029172 26136 0.857 - - - - - - 0.857 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
93. NAA38 ENSGALG00000045783 11229 0.856 - - - - - - 0.856 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
94. GLRX3 ENSGALG00000010464 22578 0.856 - - - - - - 0.856 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
95. PRCC ENSGALG00000040696 9346 0.855 - - - - 0.855 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
96. PCNP ENSGALG00000015330 15750 0.855 - - - - - - 0.855 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
97. UBE2D3 ENSGALG00000012311 39831 0.855 - - - - 0.855 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
98. NUPL1 NUPL1 8197 0.854 - - - - - - 0.854 - - -
99. RAD21 ENSGALG00000029523 25658 0.853 - - - - - - 0.853 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
100. SLC25A3 ENSGALG00000011514 62606 0.853 - - - - - - 0.853 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]

There are 908 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA