Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EIF1

Gene Name Gene ID Reads Annotation
EIF1 ENSGALG00000028517 124882 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]











Genes with expression patterns similar to EIF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EIF1 ENSGALG00000028517 124882 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
2. RPS23 ENSGALG00000015617 430299 1.483 0.781 - - - - - - 0.702 - - ribosomal protein S23
3. MAP4K3 ENSGALG00000039720 5124 0.874 - - - - - - - 0.874 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
4. INTS2 ENSGALG00000005269 6966 0.869 - - - - - - - 0.869 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
5. FARP1 ENSGALG00000016886 13132 0.869 - - - - - - - 0.869 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
6. MYBL2 ENSGALG00000003503 15875 0.868 - - - - - - - 0.868 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
7. KLHDC2 ENSGALG00000012244 12903 0.868 - - - - - - - 0.868 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
8. WDFY3 10775 0.867 - - - - - - - 0.867 - - WD repeat and FYVE domain containing 3, transcript variant X7
9. PTK7 ENSGALG00000008609 8081 0.866 - - - - - - - 0.866 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
10. PHAX ENSGALG00000014691 8114 0.866 - - - - - - - 0.866 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
11. ZNF462 ENSGALG00000015451 12653 0.865 - - - - - - - 0.865 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
12. ADAR ENSGALG00000021475 6004 0.865 - - - - - - - 0.865 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
13. SLBP ENSGALG00000015712 5586 0.865 - - - - - - - 0.865 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
14. TNFRSF21 ENSGALG00000016719 2762 0.865 - - - - - - - 0.865 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
15. CWC22 ENSGALG00000009001 5984 0.865 - - - - - - - 0.865 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
16. LMO7 ENSGALG00000016920 3809 0.865 - - - - - - - 0.865 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
17. VPS36 ENSGALG00000017026 3658 0.864 - - - - - - - 0.864 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
18. PDCD6 ENSGALG00000013400 7611 0.864 - - - - - - - 0.864 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
19. FAT1 ENSGALG00000013579 6030 0.864 - - - - - - - 0.864 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
20. GYG1 ENSGALG00000035535 6311 0.864 - - - - - - - 0.864 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
21. PPAT ENSGALG00000013728 7563 0.864 - - - - - - - 0.864 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
22. CTU2 4818 0.863 - - - - - - - 0.863 - - cytosolic thiouridylase subunit 2, transcript variant X3
23. C9orf89 C9orf89 3056 0.863 - - - - - - - 0.863 - -
24. RRBP1 ENSGALG00000008676 5376 0.863 - - - - - - - 0.863 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
25. PRRX2 ENSGALG00000028236 1990 0.863 - - - - - - - 0.863 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
26. USP30 ENSGALG00000040265 2000 0.862 - - - - - - - 0.862 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
27. VEGFC ENSGALG00000010847 2197 0.862 - - - - - - - 0.862 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
28. SIN3A ENSGALG00000001644 1141 0.862 - - - - - - - 0.862 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
29. STAMBP ENSGALG00000042555 1362 0.861 - - - - - - - 0.861 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
30. SLC52A3 ENSGALG00000006194 3952 0.861 - - - - - - - 0.861 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
31. TMEM69 ENSGALG00000010279 716 0.861 - - - - - - - 0.861 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
32. USP42 ENSGALG00000003378 1392 0.861 - - - - - - - 0.861 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
33. GNA12 ENSGALG00000004368 692 0.86 - - - - - - - 0.860 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
34. CREB1 ENSGALG00000008494 2219 0.86 - - - - - - - 0.860 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
35. ENSGALG00000028413 ENSGALG00000028413 551 0.86 - - - - - - - 0.860 - -
36. TDRD1 ENSGALG00000046180 612 0.86 - - - - - - - 0.860 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
37. LAMTOR2 ENSGALG00000029881 35356 0.855 - - - - - - - 0.855 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
38. MCM6 ENSGALG00000012348 12523 0.854 - - - - - - - 0.854 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
39. EIF5 ENSGALG00000011464 62584 0.85 - - - - - - - 0.850 - - eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
40. CPSF4 ENSGALG00000004714 14353 0.848 - - - - - - - 0.848 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
41. ACTR6 ENSGALG00000040976 31271 0.847 - - - - - - - 0.847 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
42. TIMM23B ENSGALG00000002089 8122 0.847 - - - - - - - 0.847 - - translocase of inner mitochondrial membrane 23 homolog B
43. MGST1 ENSGALG00000013098 17632 0.839 - - - - - - - 0.839 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
44. HSPA12A ENSGALG00000009248 7783 0.831 - - - - - - - 0.831 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
45. BMP4 ENSGALG00000012429 4306 0.826 - - - - - - - 0.826 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
46. LAPTM4A ENSGALG00000016479 15973 0.824 - - - - - - - 0.824 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
47. GLO1 ENSGALG00000010127 31662 0.824 - - - - - - - 0.824 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
48. CSNK2A1 ENSGALG00000006197 41409 0.823 - - - - - - - 0.823 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
49. SPATA20 ENSGALG00000006857 3506 0.819 - - - - - - - 0.819 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
50. C11orf57 C11orf57 4971 0.819 - - - - - - - 0.819 - -
51. NSUN4 ENSGALG00000010360 3567 0.819 - - - - - - - 0.819 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
52. RPS21 ENSGALG00000005338 293390 0.819 0.819 - - - - - - - - - ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
53. NAA30 ENSGALG00000012098 4681 0.819 - - - - - - - 0.819 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
54. DERL1 ENSGALG00000033950 15074 0.818 - - - - - - - 0.818 - - derlin 1 [Source:NCBI gene;Acc:420350]
55. PDCL3 ENSGALG00000016772 14897 0.818 - - - - - - - 0.818 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
56. RPL7L1 ENSGALG00000011974 20292 0.813 - - - - - - - 0.813 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
57. ZNF367 ENSGALG00000012629 3215 0.809 - - - - - - - 0.809 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
58. THRAP3 ENSGALG00000002144 21958 0.798 - - - - - - - 0.798 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
59. MED6 ENSGALG00000029743 9414 0.798 - - - - - - - 0.798 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
60. NDUFV2 ENSGALG00000036625 29234 0.797 - - - - - - - 0.797 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
61. CDC42SE1 ENSGALG00000028119 14813 0.796 - - - - - - - - - 0.796 CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
62. TMEM199 ENSGALG00000023757 10781 0.795 - - - - - - - 0.795 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
63. TAF15 ENSGALG00000002060 12320 0.793 - - - - - - - 0.793 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
64. gga-mir-3533 ENSGALG00000027736 789549 0.791 - - - - - - - - - 0.791 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
65. CKAP4 ENSGALG00000012659 36398 0.784 - - - - - - - 0.784 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
66. RPL27 ENSGALG00000002837 302752 0.781 0.781 - - - - - - - - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
67. TRA2B ENSGALG00000006531 40566 0.779 - - - - - - - 0.779 - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
68. ENSGALG00000021694 ENSGALG00000021694 26011 0.764 - - - - - - - 0.764 - -
69. DHCR24 ENSGALG00000010798 3963 0.763 - - - - - - - 0.763 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
70. RPL23 ENSGALG00000001634 246592 0.763 0.763 - - - - - - - - - Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
71. ID1 ENSGALG00000034661 44524 0.761 - - - - - 0.761 - - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
72. RPL36 ENSGALG00000000474 237707 0.761 0.761 - - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
73. ARHGEF7 ENSGALG00000031009 10090 0.761 - - - - - - - 0.761 - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
74. RBM17 ENSGALG00000006332 12656 0.758 - - - - - - - 0.758 - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
75. TCEB3 ENSGALG00000034625 184577 0.752 0.752 - - - - - - - - - transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
76. EI24 ENSGALG00000038097 24081 0.752 - - - - - 0.752 - - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
77. RPL31 ENSGALG00000016775 188657 0.751 0.751 - - - - - - - - - ribosomal protein L31 [Source:NCBI gene;Acc:418710]
78. ANP32E ENSGALG00000039891 35925 0.749 - - - - - - - 0.749 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
79. CNOT7 ENSGALG00000013649 23435 0.741 - - - - - - - 0.741 - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
80. POLDIP2 ENSGALG00000003211 11664 0.74 - - - - - - - - - 0.740 DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
81. PSMB4 ENSGALG00000000905 46735 0.735 - - - - - - - - - 0.735 proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
82. ZC3H13 ENSGALG00000016984 21043 0.734 - - - - - 0.734 - - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
83. POLR2E ENSGALG00000002591 26405 0.734 - - - - - - - - - 0.734 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
84. RPL29 ENSGALG00000026978 271790 0.734 0.734 - - - - - - - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
85. UQCRC1 ENSGALG00000005789 23201 0.731 - - - - - - - 0.731 - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
86. CLNS1A ENSGALG00000008574 25675 0.73 0.730 - - - - - - - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
87. MYCL ENSGALG00000024047 10367 0.728 - - - - - - - - - 0.728 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
88. TXN ENSGALG00000015704 170016 0.726 0.726 - - - - - - - - - thioredoxin [Source:NCBI gene;Acc:396437]
89. OAZ OAZ 45951 0.725 - - - - - - - - 0.725 -
90. PEO1 PEO1 6747 0.724 - - - - - - - - - 0.724
91. CYP51A1 ENSGALG00000009365 6996 0.722 - - - - - 0.722 - - - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
92. PPIB ENSGALG00000002210 46778 0.721 - - - - - 0.721 - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
93. RPL14 ENSGALG00000043379 239812 0.721 0.721 - - - - - - - - - ribosomal protein L14
94. HSPA5 ENSGALG00000001000 40342 0.72 - - - - - 0.720 - - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
95. RPS24 ENSGALG00000004871 173117 0.72 0.720 - - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
96. GDI2 ENSGALG00000008169 67151 0.718 - - - - - - - - 0.718 - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
97. PEBP1 ENSGALG00000007403 77502 0.717 - - - - - - - - 0.717 - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
98. TTYH2 ENSGALG00000026940 15628 0.716 - - - - - - - - 0.716 - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
99. DNPEP ENSGALG00000011318 10623 0.716 - - - - - - - - - 0.716 aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
100. ATP5MC1 ENSGALG00000001330 37766 0.715 - - - - - - - 0.715 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]

There are 15 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA