Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for EHD3

Gene Name Gene ID Reads Annotation
EHD3 ENSGALG00000009086 14407 EH domain containing 3 [Source:NCBI gene;Acc:421306]











Genes with expression patterns similar to EHD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EHD3 ENSGALG00000009086 14407 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 EH domain containing 3 [Source:NCBI gene;Acc:421306]
2. TUBB6 ENSGALG00000031275 17690 1.775 - - - - - - 0.856 0.919 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
3. LSM5 ENSGALG00000041625 22307 1.737 - - - - - - 0.849 0.888 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
4. ATG3 ENSGALG00000015204 11277 1.732 - - - - - - 0.884 0.848 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
5. FYTTD1 ENSGALG00000007581 9341 1.684 - - - - - - 0.875 0.809 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
6. METAP2 ENSGALG00000011377 16311 1.668 - - - - - - 0.877 0.791 - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
7. RERE ENSGALG00000002232 8724 1.661 - - - - - - 0.808 0.853 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
8. MRPL22 ENSGALG00000003919 2760 1.655 - - - - - - 0.782 0.873 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
9. KRR1 ENSGALG00000010227 11783 1.627 - - - - - - 0.725 0.902 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
10. COMMD10 ENSGALG00000002308 7442 1.626 - - - - - - 0.738 0.888 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
11. C14orf1 C14orf1 14289 1.624 - - - - - - 0.736 0.888 - -
12. GLRX3 ENSGALG00000010464 22578 1.612 - - - - - - 0.881 - - 0.731 glutaredoxin 3 [Source:NCBI gene;Acc:423968]
13. PSMC3IP ENSGALG00000019741 5428 1.61 - - - - - - 0.728 0.882 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
14. NASP ENSGALG00000010255 28423 1.605 - - - - - - 0.825 - - 0.780 nuclear autoantigenic sperm protein, transcript variant X3
15. CTCF 10811 1.58 - - - - - - 0.813 - - 0.767 CCCTC-binding factor, transcript variant X2
16. ITGB1 ENSGALG00000007145 19551 1.573 - - - - 0.700 - 0.873 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
17. LMAN1 ENSGALG00000034821 12788 1.571 - - - - 0.704 - 0.867 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
18. SPEN ENSGALG00000036932 9688 1.567 - - - - - - 0.816 - - 0.751 spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
19. PMPCA ENSGALG00000001950 6766 1.552 - - - - - - 0.783 0.769 - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
20. SLC15A4 ENSGALG00000002695 2729 1.551 - - - - - - 0.804 - - 0.747 solute carrier family 15 member 4 [Source:HGNC Symbol;Acc:HGNC:23090]
21. RIOK3 ENSGALG00000015004 4249 1.55 - - - - - - 0.734 0.816 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
22. TET1 ENSGALG00000031604 13002 1.547 - - - - - - 0.837 - - 0.710 tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
23. RABIF ENSGALG00000000436 6449 1.547 - - - - - - 0.714 0.833 - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
24. MORF4L1 ENSGALG00000008146 29940 1.544 - - - - - - 0.702 0.842 - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
25. MLST8 ENSGALG00000005878 8116 1.542 - - - - - - 0.784 - - 0.758 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
26. CKI CKI 2845 1.535 - - - - - - 0.709 - - 0.826
27. TTC3 ENSGALG00000016050 4115 1.53 - - - - - - 0.816 - - 0.714 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
28. FBXL17 ENSGALG00000000276 2443 1.525 - - - - - - 0.795 - - 0.730 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
29. FTSJ3 ENSGALG00000032993 8929 1.523 - - - - - - 0.708 - - 0.815 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
30. MRPL15 ENSGALG00000041086 16820 1.52 - - - - - - 0.782 - - 0.738 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
31. YIPF6 ENSGALG00000035973 3333 1.516 - - - - - - 0.779 - - 0.737 Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
32. IP6K2 ENSGALG00000005701 12539 1.502 - - - - - - 0.750 0.752 - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
33. HOXA9 ENSGALG00000028983 9298 1.499 - - - - - - 0.736 - - 0.763 homeobox A9 [Source:NCBI gene;Acc:396096]
34. KIAA1671 ENSGALG00000005512 2540 1.499 - - - - - - 0.784 - - 0.715 KIAA1671 [Source:NCBI gene;Acc:768701]
35. USE1 ENSGALG00000003703 4680 1.497 - - - - - - 0.757 - - 0.740 unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
36. PDCD7 ENSGALG00000021027 3807 1.495 - - - - - - 0.738 - - 0.757 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
37. WASF1 ENSGALG00000015066 5628 1.49 - - - - - - 0.749 0.741 - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
38. VPRBP VPRBP 4037 1.486 - - - - - - 0.701 - - 0.785
39. CSTF2 ENSGALG00000006760 8820 1.474 - - - - - - 0.767 - - 0.707 cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
40. FERMT2 ENSGALG00000012425 5480 1.457 - - - - - - 0.711 - - 0.746 fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
41. MTO1 ENSGALG00000015923 4418 1.447 - - - - - - 0.704 - - 0.743 mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
42. KNTC1 ENSGALG00000004515 1417 1.433 - - - - - - 0.726 - - 0.707 kinetochore associated 1 [Source:HGNC Symbol;Acc:HGNC:17255]
43. INTS12 ENSGALG00000010575 2976 1.431 - - - - - - 0.701 - - 0.730 integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
44. VCAN ENSGALG00000015624 11489 1.421 - - - - 0.715 - 0.706 - - - versican [Source:NCBI gene;Acc:395565]
45. ARHGAP11A ENSGALG00000009731 6817 1.416 - - - - - - 0.706 - - 0.710 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
46. SBNO1 ENSGALG00000003392 6731 1.415 - - - - - - 0.713 - - 0.702 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
47. GREB1 ENSGALG00000016455 12794 0.931 - - - - - - - 0.931 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
48. EVL ENSGALG00000011209 5440 0.92 - - - - - - 0.920 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
49. ERP29 ENSGALG00000023510 47100 0.919 - - - - - - - 0.919 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
50. HOXA4 ENSGALG00000022622 22327 0.913 - - - - - - - 0.913 - - homeobox A4 [Source:NCBI gene;Acc:395307]
51. AIF1L ENSGALG00000029834 13866 0.907 - - - - - - - 0.907 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
52. NDUFA9 ENSGALG00000017282 14358 0.907 - - - - - - - 0.907 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
53. MRPL24 ENSGALG00000030994 24264 0.905 - - - - - - 0.905 - - - mitochondrial ribosomal protein L24 [Source:HGNC Symbol;Acc:HGNC:14037]
54. MAP3K7 ENSGALG00000015596 15164 0.904 - - - - - - 0.904 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
55. DRG1 ENSGALG00000006921 10791 0.903 - - - - - - - 0.903 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
56. PSMB2 ENSGALG00000026421 51885 0.901 - - - - - - 0.901 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
57. SKAP2 ENSGALG00000030081 13746 0.901 - - - - - - 0.901 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
58. ISY1 ENSGALG00000005012 7477 0.9 - - - - - - - 0.900 - - ISY1 splicing factor homolog
59. ACTN1 ENSGALG00000042458 10477 0.891 - - - - - - 0.891 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
60. RANBP1 ENSGALG00000002107 17715 0.891 - - - - - - 0.891 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
61. AN1ZNF5L ENSGALG00000014589 21148 0.889 - - - - - - 0.889 - - - AN1-type zinc finger protein 5-like, transcript variant X2
62. GTF3A ENSGALG00000017098 9264 0.889 - - - - - - - 0.889 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
63. YWHAZ ENSGALG00000031387 84985 0.889 - - - - - - 0.889 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
64. LIX1 ENSGALG00000015290 7589 0.886 - - - - - - - 0.886 - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
65. HSPA4 ENSGALG00000040882 20966 0.885 - - - - - - 0.885 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
66. NUMA1 ENSGALG00000001258 8406 0.885 - - - - - - - 0.885 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
67. ENSGALG00000017396 ENSGALG00000017396 9028 0.884 - - - - - - 0.884 - - -
68. NOC4L ENSGALG00000002272 9644 0.883 - - - - - - 0.883 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
69. SSR3 ENSGALG00000028683 24334 0.882 - - - - - - 0.882 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
70. HGS ENSGALG00000007224 3487 0.882 - - - - - - - 0.882 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
71. ATP6V1C1 ENSGALG00000034099 9898 0.882 - - - - - - - 0.882 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
72. PI4K2B ENSGALG00000031538 2607 0.881 - - - - - - - 0.881 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
73. EXOC8 ENSGALG00000043280 3596 0.881 - - - - - - - 0.881 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
74. UMPS ENSGALG00000011770 11331 0.88 - - - - - - 0.880 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
75. EIF4A2 ENSGALG00000008684 58507 0.88 - - - - - - 0.880 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
76. ERP44 ENSGALG00000013452 5352 0.88 - - - - - - - 0.880 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
77. SKP2 ENSGALG00000003547 14637 0.879 - - - - - - 0.879 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
78. TMEM184C ENSGALG00000010019 7856 0.879 - - - - - - 0.879 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
79. KIF18B ENSGALG00000031553 3192 0.879 - - - - - - - 0.879 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
80. DCAF4 ENSGALG00000009345 2604 0.878 - - - - - - - 0.878 - - DDB1 and CUL4 associated factor 4
81. APIP ENSGALG00000031286 6838 0.877 - - - - - - 0.877 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
82. ILF2 ENSGALG00000011570 23050 0.877 - - - - - - 0.877 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
83. PPP1R2 ENSGALG00000029789 11594 0.877 - - - - - - 0.877 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
84. TM4SF18 4553 0.876 - - - - - - 0.876 - - - transmembrane 4 L six family member 18, transcript variant X2
85. ADAT1 ENSGALG00000000908 1484 0.876 - - - - - - - 0.876 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
86. COMT ENSGALG00000002024 2483 0.876 - - - - - - - 0.876 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
87. ASAH1 ENSGALG00000026364 2783 0.875 - - - - - - - 0.875 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
88. COMMD8 ENSGALG00000026279 13509 0.875 - - - - - - - 0.875 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
89. COL5A2 ENSGALG00000031112 18358 0.875 - - - - - - 0.875 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
90. ZRANB2 ENSGALG00000011340 18994 0.875 - - - - - - - 0.875 - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
91. MAP2K4 ENSGALG00000032178 5982 0.874 - - - - - - 0.874 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
92. SPCS3 ENSGALG00000010839 19106 0.874 - - - - - - 0.874 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
93. SNRNP40 ENSGALG00000000615 32298 0.874 - - - - - - 0.874 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
94. RUVBL1 ENSGALG00000005931 9379 0.873 - - - - - - 0.873 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
95. AP2A2 ENSGALG00000006799 13874 0.872 - - - - - - 0.872 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
96. BET1L ENSGALG00000004172 5305 0.872 - - - - - - 0.872 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
97. ZDHHC14 ENSGALG00000013695 2648 0.871 - - - - - - - 0.871 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
98. GPC4 ENSGALG00000006080 56498 0.87 - - - - - - 0.870 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
99. EIF2B1 ENSGALG00000003259 9491 0.87 - - - - - - 0.870 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
100. EI24 ENSGALG00000038097 24081 0.869 - - - - - - - 0.869 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]

There are 1061 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA