Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EFR3A

Gene Name Gene ID Reads Annotation
EFR3A ENSGALG00000039533 3826 EFR3 homolog A [Source:HGNC Symbol;Acc:HGNC:28970]











Genes with expression patterns similar to EFR3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EFR3A ENSGALG00000039533 3826 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 EFR3 homolog A [Source:HGNC Symbol;Acc:HGNC:28970]
2. SIVA1 ENSGALG00000011619 15130 1.727 - - - - - - 0.833 0.894 - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
3. CAMK2G ENSGALG00000005088 5037 1.598 - - - - - - 0.746 0.852 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
4. FAM160B1 ENSGALG00000031404 3153 1.581 - - - - - - 0.750 0.831 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
5. VDAC2 ENSGALG00000005002 12592 1.578 - - - - - - 0.729 0.849 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
6. LOC776067 ENSGALG00000016808 9164 1.576 - - - - - - 0.754 0.822 - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
7. FNBP1L ENSGALG00000005850 9219 1.558 - - - - - - 0.760 0.798 - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
8. POLR1E ENSGALG00000005395 8953 1.555 - - - - - - 0.745 0.810 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
9. CCDC75 CCDC75 4865 1.549 - - - - - - 0.714 0.835 - -
10. RFC5 ENSGALG00000026517 26113 1.542 - - - - - - 0.736 0.806 - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
11. ERBB2IP ERBB2IP 5800 1.536 - - - - - - 0.818 - 0.718 -
12. NDUFS1 ENSGALG00000008606 7898 1.492 - - - - - - 0.759 - 0.733 - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
13. RANGAP1 ENSGALG00000011966 20170 1.486 - - - - - - 0.760 0.726 - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
14. MRPL23 ENSGALG00000006561 13737 0.919 - - - - - - - 0.919 - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
15. DPM2 ENSGALG00000005066 9121 0.905 - - - - - - - 0.905 - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
16. MPDZ ENSGALG00000005846 3179 0.893 - - - - - - - 0.893 - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
17. CIR1 ENSGALG00000014276 7189 0.884 - - - - - - - 0.884 - - corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
18. CYB5R3 ENSGALG00000014122 7664 0.884 - - - - - - - 0.884 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
19. THNSL2 ENSGALG00000015939 2184 0.874 - - - - - - - 0.874 - - threonine synthase like 2 [Source:HGNC Symbol;Acc:HGNC:25602]
20. TPRKB ENSGALG00000013018 8687 0.873 - - - - - - 0.873 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
21. ARMC1 ENSGALG00000036567 5476 0.873 - - - - - - - 0.873 - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
22. CDA ENSGALG00000007382 1544 0.871 - - - - - - - 0.871 - - cytidine deaminase [Source:NCBI gene;Acc:771849]
23. C1H21ORF33 ENSGALG00000019171 8910 0.868 - - - - - - - 0.868 - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
24. MAP3K7 ENSGALG00000015596 15164 0.868 - - - - - - 0.868 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
25. HAND1 ENSGALG00000035104 2351 0.866 - - - - - - - 0.866 - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
26. ASUN ASUN 17129 0.864 - - - - - - 0.864 - - -
27. LSM5 ENSGALG00000041625 22307 0.863 - - - - - - 0.863 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
28. ABTB1 ENSGALG00000005999 2446 0.862 - - - - - - - 0.862 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
29. COLEC12 ENSGALG00000014910 5859 0.861 - - - - - - - 0.861 - - collectin subfamily member 12 [Source:NCBI gene;Acc:421061]
30. PAXBP1 ENSGALG00000036833 5573 0.861 - - - - - - - 0.861 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
31. URB1 ENSGALG00000015887 5854 0.86 - - - - - - 0.860 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
32. MED14 ENSGALG00000016238 4685 0.86 - - - - - - - 0.860 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
33. ICT1 ICT1 11725 0.86 - - - - - - - 0.860 - -
34. TSPAN5 ENSGALG00000012227 8703 0.86 - - - - - - - 0.860 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
35. PNPLA8 ENSGALG00000009505 2910 0.859 - - - - - - - 0.859 - - patatin like phospholipase domain containing 8 [Source:NCBI gene;Acc:417785]
36. KIAA1551 ENSGALG00000045168 3435 0.858 - - - - - - - 0.858 - - KIAA1551, transcript variant X1
37. RANBP1 ENSGALG00000002107 17715 0.857 - - - - - - 0.857 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
38. TADA1L TADA1L 6659 0.856 - - - - - - - 0.856 - -
39. ENSGALG00000026213 ENSGALG00000026213 562 0.855 - - - - - - - - 0.855 -
40. ATP6V0E2 ENSGALG00000020754 2648 0.855 - - - - - - - 0.855 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
41. AP1G1 12403 0.853 - - - - - - - 0.853 - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
42. YWHAZ ENSGALG00000031387 84985 0.853 - - - - - - 0.853 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
43. IDS ENSGALG00000009154 1177 0.852 - - - - - - - 0.852 - - iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
44. KIF3B ENSGALG00000006604 2968 0.851 - - - - - - - 0.851 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
45. SUPT4H1 ENSGALG00000000944 8675 0.849 - - - - - - - 0.849 - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
46. ATG5 ENSGALG00000015387 7752 0.849 - - - - - - 0.849 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
47. PLRG1 ENSGALG00000009257 8613 0.849 - - - - - - 0.849 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
48. CNOT2 ENSGALG00000010042 7612 0.847 - - - - - - - 0.847 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
49. SECISBP2 ENSGALG00000010694 6990 0.847 - - - - - - - 0.847 - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
50. RUVBL1 ENSGALG00000005931 9379 0.847 - - - - - - 0.847 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
51. ACTR3B ENSGALG00000006292 2235 0.846 - - - - - - - 0.846 - - ARP3 actin related protein 3 homolog B, transcript variant X1
52. TRAPPC12 ENSGALG00000016387 2593 0.846 - - - - - - - 0.846 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
53. EBNA1BP2 ENSGALG00000009045 17453 0.844 - - - - - - 0.844 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
54. RBM34 ENSGALG00000029915 5618 0.844 - - - - - - - 0.844 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
55. PPP1R2 ENSGALG00000029789 11594 0.844 - - - - - - 0.844 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
56. DIABLO ENSGALG00000004412 9499 0.843 - - - - - - - 0.843 - - diablo IAP-binding mitochondrial protein, transcript variant X3
57. CNOT11 ENSGALG00000039563 11251 0.843 - - - - - - 0.843 - - - CCR4-NOT transcription complex subunit 11
58. SMN ENSGALG00000002430 7515 0.842 - - - - - - - 0.842 - - survival of motor neuron [Source:NCBI gene;Acc:374025]
59. MMP17 3885 0.842 - - - - - - - 0.842 - - matrix metallopeptidase 17
60. BRF1 ENSGALG00000011705 3406 0.842 - - - - - - - 0.842 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
61. CLIC4 ENSGALG00000001262 11497 0.841 - - - - - - - 0.841 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
62. BLOC1S5 ENSGALG00000012782 5885 0.841 - - - - - - 0.841 - - - biogenesis of lysosomal organelles complex 1 subunit 5 [Source:NCBI gene;Acc:420866]
63. SLC37A4 ENSGALG00000007716 2263 0.839 - - - - - - - 0.839 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
64. NCDN ENSGALG00000002408 6180 0.839 - - - - - - - 0.839 - - neurochondrin [Source:NCBI gene;Acc:419633]
65. C5H15ORF57 C5H15ORF57 4113 0.838 - - - - - - - 0.838 - -
66. ST14 ENSGALG00000001331 1655 0.838 - - - - - - - 0.838 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
67. CYB5R2 ENSGALG00000032372 7967 0.838 - - - - - - 0.838 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
68. IBA57 ENSGALG00000005328 4362 0.837 - - - - - - - 0.837 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
69. SEMA3C ENSGALG00000040444 5404 0.837 - - - - - - - 0.837 - - semaphorin 3C [Source:NCBI gene;Acc:374090]
70. MED20 ENSGALG00000003474 4583 0.836 - - - - - - - 0.836 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
71. FBXL7 ENSGALG00000031947 2480 0.835 - - - - - - - 0.835 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
72. DCN ENSGALG00000011274 4166 0.835 - - - - - - - - 0.835 - decorin [Source:NCBI gene;Acc:417892]
73. SLC4A3 ENSGALG00000011224 2161 0.835 - - - - - - - 0.835 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
74. RABGGTB ENSGALG00000011388 11654 0.835 - - - - - - 0.835 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
75. ZFP91 ENSGALG00000007287 13681 0.835 - - - - - - - 0.835 - - ZFP91 zinc finger protein
76. INTS2 ENSGALG00000005269 6966 0.833 - - - - - - 0.833 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
77. MRTO4 ENSGALG00000003991 13642 0.833 - - - - - - - 0.833 - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
78. HABP4 ENSGALG00000012628 2894 0.833 - - - - - - - 0.833 - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
79. TTC17 ENSGALG00000039558 3301 0.832 - - - - - - - 0.832 - - tetratricopeptide repeat domain 17
80. PARP1 ENSGALG00000009228 39433 0.832 - - - - - - 0.832 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
81. GOT1 ENSGALG00000007484 21664 0.832 - - - - - - - 0.832 - - glutamic-oxaloacetic transaminase 1 [Source:NCBI gene;Acc:396261]
82. UBA3 ENSGALG00000013410 6923 0.832 - - - - - - - 0.832 - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
83. GTSE1 ENSGALG00000004897 2865 0.832 - - - - - - - 0.832 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
84. TBC1D19 ENSGALG00000029673 1868 0.831 - - - - - - - 0.831 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
85. CDC45 ENSGALG00000001616 8432 0.83 - - - - - - 0.830 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
86. DGCR2 ENSGALG00000005891 8405 0.83 - - - - - - 0.830 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
87. ENSGALG00000005785 ENSGALG00000005785 1570 0.83 - - - - - - - 0.830 - -
88. ATG3 ENSGALG00000015204 11277 0.829 - - - - - - 0.829 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
89. NCBP1 ENSGALG00000002087 8907 0.829 - - - - - - - 0.829 - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
90. MRPL37 ENSGALG00000010761 10596 0.829 - - - - - - 0.829 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
91. HSPA4 ENSGALG00000040882 20966 0.828 - - - - - - 0.828 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
92. WBP4 ENSGALG00000016949 5858 0.827 - - - - - - - 0.827 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
93. RBM17 ENSGALG00000006332 12656 0.827 - - - - - - 0.827 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
94. MAN1A1 ENSGALG00000014878 1061 0.827 - - - - - - - 0.827 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
95. SIAH2 ENSGALG00000010395 2126 0.827 - - - - - - - 0.827 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
96. LOC427439 ENSGALG00000003605 9312 0.826 - - - - - - - 0.826 - - Nipped-B homolog-like, transcript variant X1
97. THAP4 ENSGALG00000006283 1707 0.826 - - - - - - - 0.826 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
98. ARID3A ENSGALG00000026231 867 0.826 - - - - - - - - 0.826 - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
99. EHD3 ENSGALG00000009086 14407 0.826 - - - - - - 0.826 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
100. SURF2 ENSGALG00000003181 3500 0.826 - - - - - - - 0.826 - - surfeit 2 [Source:NCBI gene;Acc:417156]

There are 595 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA