Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EFNB2

Gene Name Gene ID Reads Annotation
EFNB2 ENSGALG00000029175 5664 ephrin B2 [Source:NCBI gene;Acc:395625]











Genes with expression patterns similar to EFNB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EFNB2 ENSGALG00000029175 5664 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ephrin B2 [Source:NCBI gene;Acc:395625]
2. WDR47 ENSGALG00000002129 2624 1.738 - - - - - - 0.901 0.837 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
3. DARS ENSGALG00000012355 2887 1.655 - - - - 0.819 - - 0.836 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
4. LFNG ENSGALG00000038515 5178 1.64 - - - - 0.803 - 0.837 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
5. LONP1 ENSGALG00000040492 7133 1.601 - - - - - - 0.773 0.828 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
6. CCDC101 CCDC101 9111 1.556 - - - - 0.814 - 0.742 - - -
7. ZC3H6 ENSGALG00000008269 10353 1.551 - - - - - - 0.727 0.824 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
8. PEX16 ENSGALG00000008421 3684 1.503 - - - - - - 0.761 - - 0.742 peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
9. CSTF3 ENSGALG00000011685 4711 1.467 - - - - - - 0.763 - - 0.704 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
10. COG7 ENSGALG00000006156 4072 0.952 - - - - - - - 0.952 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
11. PKP2 ENSGALG00000012913 2547 0.939 - - - - - - - 0.939 - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
12. SRPK1 ENSGALG00000037546 1849 0.936 - - - - - - 0.936 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
13. RBL1 ENSGALG00000001332 2568 0.921 - - - - - - 0.921 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
14. HSP90AA1 ENSGALG00000033212 55740 0.919 - - - - 0.919 - - - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
15. SUGP1 ENSGALG00000042132 2771 0.905 - - - - - - 0.905 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
16. DIEXF ENSGALG00000009887 4782 0.904 - - - - - - 0.904 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
17. SMAD5 ENSGALG00000006309 1748 0.901 - - - - - - 0.901 - - - SMAD family member 5 [Source:NCBI gene;Acc:395679]
18. GAS2 ENSGALG00000003655 2672 0.898 - - - - - - 0.898 - - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
19. NUPL1 NUPL1 8197 0.898 - - - - - - - 0.898 - -
20. USP8 ENSGALG00000005894 4499 0.895 - - - - - - 0.895 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
21. USP54 ENSGALG00000005232 2749 0.892 - - - - - - 0.892 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
22. MBNL2 ENSGALG00000016890 3162 0.89 - - - - - - 0.890 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
23. PEX6 ENSGALG00000045514 4582 0.89 - - - - - - 0.890 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
24. PLCE1 ENSGALG00000039528 151 0.889 - - - - - - 0.889 - - - phospholipase C epsilon 1
25. TM9SF4 ENSGALG00000006568 567 0.886 - - - - - - 0.886 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
26. RRM1 ENSGALG00000017350 47890 0.885 - - - - 0.885 - - - - - ribonucleotide reductase catalytic subunit M1 [Source:NCBI gene;Acc:419081]
27. MBNL1 ENSGALG00000029190 3953 0.885 - - - - - - 0.885 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
28. PGAP2 ENSGALG00000027762 2583 0.883 - - - - - - 0.883 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
29. SLC25A21 ENSGALG00000010117 536 0.882 - - - - - - 0.882 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
30. CNOT10 ENSGALG00000011494 2614 0.881 - - - - - - 0.881 - - - CCR4-NOT transcription complex subunit 10 [Source:NCBI gene;Acc:420669]
31. MED16 ENSGALG00000001978 2387 0.881 - - - - - - 0.881 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
32. KRR1 ENSGALG00000010227 11783 0.878 - - - - 0.878 - - - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
33. MORC3 ENSGALG00000036556 2976 0.875 - - - - - - 0.875 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
34. GPN3 ENSGALG00000003807 6320 0.873 - - - - - - 0.873 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
35. RAB1A ENSGALG00000031582 6929 0.872 - - - - - - 0.872 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
36. RCAN3 ENSGALG00000004282 7778 0.87 - - - - - - 0.870 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
37. INTS7 ENSGALG00000009843 2395 0.869 - - - - - - 0.869 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
38. MRPL35 ENSGALG00000022950 26070 0.867 - - - - - - - 0.867 - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
39. SCLT1 2397 0.867 - - - - - - 0.867 - - - sodium channel and clathrin linker 1, transcript variant X6
40. HELLS ENSGALG00000005451 7094 0.866 - - - - - - 0.866 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
41. ENSGALG00000013233 ENSGALG00000013233 3265 0.865 - - - - - - 0.865 - - -
42. HYOU1 ENSGALG00000007659 3555 0.865 - - - - - - 0.865 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
43. GPC3 ENSGALG00000006087 3744 0.861 - - - - - - 0.861 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
44. NSRP1 ENSGALG00000004186 1683 0.859 - - - - - - 0.859 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
45. RPIA ENSGALG00000015960 2784 0.857 - - - - - - 0.857 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
46. FN3KRP ENSGALG00000028979 4160 0.857 - - - - - - 0.857 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
47. MPST ENSGALG00000040840 2122 0.856 - - - - - - 0.856 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
48. WIPI1 ENSGALG00000004215 3359 0.855 - - - - - - 0.855 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
49. HNRNPAB ENSGALG00000014381 41009 0.854 - - - - 0.854 - - - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
50. MESDC1 1013 0.854 - - - - - - 0.854 - - - mesoderm development candidate 1
51. RBM34 ENSGALG00000029915 5618 0.853 - - - - - - 0.853 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
52. TNFAIP8 ENSGALG00000027761 2383 0.853 - - - - - - 0.853 - - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
53. SPG11 ENSGALG00000008180 1890 0.851 - - - - - - 0.851 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
54. FAM183A 242 0.851 - - - - - - 0.851 - - - family with sequence similarity 183 member A, transcript variant 2
55. SDK2 ENSGALG00000031895 2682 0.85 - - - - - - 0.850 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
56. IFT74 ENSGALG00000001801 1932 0.848 - - - - - - 0.848 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]
57. FAM193A ENSGALG00000015667 3075 0.848 - - - - - - 0.848 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
58. SNORA31 SNORA31 183 0.847 - - - - - - 0.847 - - -
59. EIF3I ENSGALG00000003337 28832 0.847 - - - - - - 0.847 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
60. ENTPD8L ENSGALG00000008936 731 0.846 - - - - - - 0.846 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
61. RNASEH1 ENSGALG00000016389 2694 0.846 - - - - - - 0.846 - - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
62. UBE3B ENSGALG00000013851 1672 0.845 - - - - - - 0.845 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
63. SPAG9 ENSGALG00000034001 2314 0.845 - - - - - - 0.845 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
64. TCTE1 ENSGALG00000010165 65 0.845 - - - - - - 0.845 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
65. PIK3R3 ENSGALG00000010335 374 0.844 - - - - - - 0.844 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
66. NUP205 ENSGALG00000011662 4157 0.844 - - - - - - 0.844 - - - nucleoporin 205
67. NPHP4 ENSGALG00000000966 1698 0.844 - - - - - - 0.844 - - - nephrocystin 4, transcript variant X5
68. BRD1 ENSGALG00000029379 6047 0.844 - - - - - - 0.844 - - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
69. GAS6 ENSGALG00000016820 481 0.844 - - - - - - 0.844 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
70. PALD1 ENSGALG00000004465 3553 0.843 - - - - - - 0.843 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
71. PTN ENSGALG00000040493 864 0.843 - - - - - - 0.843 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
72. ENSGALG00000016099 ENSGALG00000016099 138 0.842 - - - - - - 0.842 - - -
73. MXRA5 ENSGALG00000016635 352 0.842 - - - - - - 0.842 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
74. ENSGALG00000003619 ENSGALG00000003619 58 0.842 - - - - - - 0.842 - - -
75. ENSGALG00000026925 ENSGALG00000026925 119 0.842 - - - - - - 0.842 - - -
76. SCUBE1 ENSGALG00000014178 91 0.841 - - - - - - 0.841 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
77. METTL24 ENSGALG00000041120 60 0.841 - - - - - - 0.841 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
78. ZYX ENSGALG00000014688 8686 0.841 - - - - - - 0.841 - - - zyxin [Source:NCBI gene;Acc:418300]
79. CEP290 ENSGALG00000011177 1559 0.841 - - - - - - 0.841 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
80. GRB14 ENSGALG00000020703 42 0.841 - - - - - - 0.841 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
81. TPR ENSGALG00000005105 2924 0.841 - - - - - - 0.841 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
82. HEMK1 ENSGALG00000002253 40 0.841 - - - - - - 0.841 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
83. C14orf80 C14orf80 1921 0.84 - - - - - - 0.840 - - -
84. PKN3 532 0.84 - - - - - - 0.840 - - - protein kinase N3, transcript variant X2
85. HESX1 ENSGALG00000005506 203 0.84 - - - - - - 0.840 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
86. WDSUB1 ENSGALG00000012574 2038 0.84 - - - - - - 0.840 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
87. DNAJC16 ENSGALG00000032832 750 0.839 - - - - - - 0.839 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
88. ACL ACL 1813 0.839 - - - - - - - 0.839 - -
89. CUTC ENSGALG00000037283 2530 0.839 - - - - - - - 0.839 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
90. NSMCE4A ENSGALG00000009504 1302 0.839 - - - - - - 0.839 - - - NSE4 homolog A, SMC5-SMC6 complex component
91. C10orf76 C10orf76 2424 0.839 - - - - - - - 0.839 - -
92. OLFM1 ENSGALG00000002515 1841 0.839 - - - - - - - 0.839 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
93. FAM114A1 ENSGALG00000013583 736 0.839 - - - - - - - 0.839 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
94. TOLLIP ENSGALG00000006697 917 0.838 - - - - - - - 0.838 - - toll interacting protein [Source:NCBI gene;Acc:423099]
95. ACTR10 ENSGALG00000012041 2752 0.838 - - - - - - - 0.838 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
96. UBR5 ENSGALG00000031282 12143 0.838 - - - - - - - 0.838 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
97. USP3 ENSGALG00000003427 1236 0.838 - - - - - - - 0.838 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
98. EPFIP1L ENSGALG00000007683 18050 0.838 - - - - - - - 0.838 - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
99. DIP2C ENSGALG00000006652 1858 0.838 - - - - - - - 0.838 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
100. SLC43A3 ENSGALG00000020479 1332 0.838 - - - - - - - 0.838 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]

There are 390 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA