Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EFNB1

Gene Name Gene ID Reads Annotation
EFNB1 ENSGALG00000036539 2706 ephrin B1 [Source:NCBI gene;Acc:395896]











Genes with expression patterns similar to EFNB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EFNB1 ENSGALG00000036539 2706 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ephrin B1 [Source:NCBI gene;Acc:395896]
2. C4orf46 ENSGALG00000009432 3255 1.807 - - - - - - 0.819 0.988 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
3. IFT81 ENSGALG00000003854 2534 1.803 - - - - - - 0.809 0.994 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
4. FOXK2 ENSGALG00000001577 6346 1.751 - - - - - - 0.845 0.906 - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
5. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.672 - - 0.764 - - - 0.908 - - -
6. ABHD13 ENSGALG00000016853 4975 1.655 - - 0.705 - - - 0.950 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
7. CASP8AP2 ENSGALG00000015611 5657 1.572 - - 0.780 - - - 0.792 - - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
8. PTPN12 9302 1.494 - - 0.718 - - - 0.776 - - - protein tyrosine phosphatase, non-receptor type 12
9. ANKS1B ENSGALG00000011549 440 0.999 - - - - - - - 0.999 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
10. CRADD ENSGALG00000011297 1653 0.999 - - - - - - - 0.999 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
11. PIK3C2B ENSGALG00000037043 4522 0.998 - - - - - - - 0.998 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
12. FPGS ENSGALG00000042460 1749 0.998 - - - - - - - 0.998 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
13. ERAL1 ENSGALG00000003995 1114 0.998 - - - - - - - 0.998 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
14. NEK1 ENSGALG00000009683 4305 0.998 - - - - - - - 0.998 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
15. ADAMTSL1 1479 0.998 - - - - - - - 0.998 - - ADAMTS like 1, transcript variant X3
16. XPOT ENSGALG00000009835 2953 0.998 - - - - - - - 0.998 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
17. GTF2H1 ENSGALG00000042340 1553 0.998 - - - - - - - 0.998 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
18. MED1 ENSGALG00000001708 9556 0.998 - - - - - - - 0.998 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
19. ERICH1 ENSGALG00000031021 1495 0.998 - - - - - - - 0.998 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
20. C12orf45 C12orf45 2445 0.998 - - - - - - - 0.998 - -
21. HEXA ENSGALG00000043828 4789 0.998 - - - - - - - 0.998 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
22. FAM69B ENSGALG00000002437 1253 0.998 - - - - - - - 0.998 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
23. PDE4B ENSGALG00000011094 1871 0.998 - - - - - - - 0.998 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
24. MAP9 ENSGALG00000020253 785 0.998 - - - - - - - 0.998 - - microtubule associated protein 9, transcript variant X7
25. STXBP3 ENSGALG00000002001 1740 0.997 - - - - - - - 0.997 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
26. CHEK2 ENSGALG00000005695 1558 0.997 - - - - - - - 0.997 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
27. PDIA3 ENSGALG00000008348 4982 0.997 - - - - - - - 0.997 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
28. C20ORF7 C20ORF7 2383 0.997 - - - - - - - 0.997 - -
29. DUSP3 ENSGALG00000035369 1790 0.997 - - - - - - - 0.997 - - dual specificity phosphatase 3
30. UQCC UQCC 5913 0.996 - - - - - - - 0.996 - -
31. VPS39 ENSGALG00000008991 4018 0.996 - - - - - - - 0.996 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
32. FABP3 ENSGALG00000037050 873 0.996 - - - - - - - 0.996 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
33. ARPC5L ENSGALG00000001014 5642 0.995 - - - - - - - 0.995 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
34. ELP3 ENSGALG00000016624 4483 0.995 - - - - - - - 0.995 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
35. PDS5B ENSGALG00000017070 3998 0.995 - - - - - - - 0.995 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
36. ATOX1 ENSGALG00000004176 16486 0.995 - - - - - - - 0.995 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
37. ANKRD49 ENSGALG00000017210 3247 0.994 - - - - - - - 0.994 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
38. WDR92 ENSGALG00000008760 3934 0.993 - - - - - - - 0.993 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
39. FZD6 ENSGALG00000030626 3336 0.993 - - - - - - - 0.993 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
40. BCL2L1 ENSGALG00000006211 2490 0.992 - - - - - - - 0.992 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
41. SOX9 ENSGALG00000004386 14802 0.991 - - - - - - - 0.991 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
42. TBC1D1 ENSGALG00000039380 4423 0.99 - - - - - - - 0.990 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
43. DCTN6 ENSGALG00000010298 7507 0.99 - - - - - - - 0.990 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
44. EIF1AY ENSGALG00000016410 6431 0.988 - - - - - - - 0.988 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
45. PES1 ENSGALG00000007778 12248 0.987 - - - - - - - 0.987 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
46. ZEB1 ENSGALG00000007260 9277 0.986 - - - - - - - 0.986 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
47. EMC7 ENSGALG00000009637 4969 0.985 - - - - - - - 0.985 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
48. SDHA ENSGALG00000013167 6509 0.984 - - - - - - - 0.984 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
49. CABIN1 ENSGALG00000006363 4415 0.983 - - - - - - - 0.983 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
50. UBE2B ENSGALG00000032664 6069 0.98 - - - - - - - 0.980 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
51. TAB2 ENSGALG00000012356 3467 0.977 - - - - - - - 0.977 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
52. PIGL ENSGALG00000004492 669 0.974 - - - - - - 0.974 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
53. IWS1 ENSGALG00000001803 2305 0.974 - - - - - - 0.974 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
54. MRM1 ENSGALG00000039523 2009 0.972 - - - - - - 0.972 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
55. POLR2H ENSGALG00000008534 21521 0.969 - - - - - - - 0.969 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
56. SLC28A3 ENSGALG00000012593 131 0.968 - - - - - - 0.968 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
57. TP53BP1 ENSGALG00000042201 708 0.968 - - - - - - 0.968 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
58. C9orf85 ENSGALG00000026001 4110 0.967 - - - - - - 0.967 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
59. TIRAP ENSGALG00000040224 2578 0.965 - - - - - - 0.965 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
60. RFFL ENSGALG00000002225 928 0.965 - - - - - - 0.965 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
61. CMPK CMPK 9569 0.965 - - - - - - - 0.965 - -
62. PTDSS2 ENSGALG00000004300 682 0.965 - - - - - - 0.965 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
63. SURF6 ENSGALG00000038413 11178 0.965 - - - - - - - 0.965 - - surfeit 6 [Source:NCBI gene;Acc:417160]
64. BBS4 ENSGALG00000001798 667 0.964 - - - - - - 0.964 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
65. GADD45 GADD45 8780 0.964 - - - - - - 0.964 - - -
66. DTX2 ENSGALG00000001905 1475 0.963 - - - - - - 0.963 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
67. DEK ENSGALG00000012684 14179 0.962 - - - - - - - 0.962 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
68. ARHGEF3 ENSGALG00000005481 683 0.962 - - - - - - 0.962 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
69. ACTR3 ENSGALG00000012159 16020 0.962 - - - - - - - 0.962 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
70. SDK1 ENSGALG00000004420 571 0.962 - - - - - - 0.962 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
71. C7orf63 C7orf63 147 0.962 - - - - - - 0.962 - - -
72. SRA1 ENSGALG00000040453 266 0.962 - - - - - - 0.962 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
73. PIGF ENSGALG00000020057 201 0.962 - - - - - - 0.962 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
74. KLF11 ENSGALG00000016440 65 0.961 - - - - - - 0.961 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
75. TUFT1 ENSGALG00000032955 1317 0.961 - - - - - - 0.961 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
76. BCAR3 358 0.961 - - - - - - 0.961 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
77. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.961 - - - - - - 0.961 - - - pseudouridylate synthase-like 1, transcript variant X8
78. TTI1 ENSGALG00000006791 1218 0.96 - - - - - - 0.960 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
79. THOC3 ENSGALG00000024172 7617 0.959 - - - - - - 0.959 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
80. LUC7L2 ENSGALG00000036238 11817 0.959 - - - - - - - 0.959 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
81. LPXN 133 0.958 - - - - - - 0.958 - - - leupaxin, transcript variant X4
82. LRR1 ENSGALG00000012230 1062 0.958 - - - - - - 0.958 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
83. FXYD6 ENSGALG00000025937 4073 0.958 - - - - - - 0.958 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
84. PPP2R5D ENSGALG00000040005 6804 0.958 - - - - - - - 0.958 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
85. APCDD1 ENSGALG00000000894 1482 0.958 - - - - - - 0.958 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
86. C7orf55 C7orf55 7083 0.958 - - - - - - 0.958 - - -
87. MYH15 ENSGALG00000015358 6304 0.957 - - - - - - 0.957 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
88. C11H19ORF12 C11H19ORF12 5149 0.957 - - - - - - 0.957 - - -
89. TNFRSF11B ENSGALG00000043167 911 0.956 - - - - - - 0.956 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
90. CLK3 ENSGALG00000001362 2171 0.956 - - - - - - 0.956 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
91. SUCLG1 ENSGALG00000015961 14323 0.956 - - - - - - - 0.956 - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
92. BTBD7 4136 0.955 - - - - - - 0.955 - - - BTB domain containing 7, transcript variant X2
93. ASTN2 ENSGALG00000007038 1748 0.954 - - - - - - 0.954 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
94. PRDM10 632 0.954 - - - - - - 0.954 - - - PR domain 10, transcript variant X10
95. PDLIM1 ENSGALG00000005422 3385 0.954 - - - - - - - 0.954 - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
96. WHSC1 1712 0.954 - - - - - - 0.954 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
97. YWHAQ ENSGALG00000016433 3450 0.954 - - - - - - 0.954 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
98. COL22A1 ENSGALG00000038022 544 0.953 - - - - - - 0.953 - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
99. ANGPTL2 ENSGALG00000000927 2580 0.953 - - - - - - 0.953 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
100. DYNC1LI1 ENSGALG00000011491 11011 0.953 - - - - - - - 0.953 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]

There are 370 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA