Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EFCC1

Gene Name Gene ID Reads Annotation
EFCC1 ENSGALG00000005024 51 EF-hand and coiled-coil domain containing 1, transcript variant X6











Genes with expression patterns similar to EFCC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EFCC1 ENSGALG00000005024 51 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 EF-hand and coiled-coil domain containing 1, transcript variant X6
2. FBXL4 ENSGALG00000015490 12 1.635 - - - - - - - 0.881 - 0.754 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
3. RNF151 ENSGALG00000034803 16 1.595 - - - - 0.752 - - 0.843 - - ring finger protein 151, transcript variant X2
4. ZDHHC20 ENSGALG00000017126 58 1.44 - - - - 0.708 - - - - 0.732 zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
5. CCDC71 ENSGALG00000006787 48 1 - - - - - - 1.000 - - - coiled-coil domain containing 71 [Source:HGNC Symbol;Acc:HGNC:25760]
6. ENSGALG00000000407 ENSGALG00000000407 32 1 - - - - - - 1.000 - - -
7. GMPR ENSGALG00000012705 30 0.966 - - - - - - - 0.966 - - guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
8. gga-mir-6585 ENSGALG00000027202 102 0.953 - - - - - - - 0.953 - - gga-mir-6585 [Source:miRBase;Acc:MI0022405]
9. C9orf3 C9orf3 47 0.918 - - - - - - - 0.918 - -
10. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.9 - - - - - - - - - 0.900 pseudouridylate synthase-like 1, transcript variant X8
11. FAM160A2 ENSGALG00000003416 23 0.891 - - - - - - - 0.891 - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
12. CHST9 ENSGALG00000019489 21 0.891 - - - - - - - 0.891 - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
13. BRD8 ENSGALG00000037646 100 0.891 - - - - - - - 0.891 - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
14. TMC3 ENSGALG00000006376 12 0.891 - - - - - - - 0.891 - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
15. ANKRD27 ENSGALG00000004671 26 0.891 - - - - - - - 0.891 - - ankyrin repeat domain 27 [Source:NCBI gene;Acc:415766]
16. PROSER1 ENSGALG00000017038 8 0.891 - - - - - - - 0.891 - - proline and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:20291]
17. HCRT ENSGALG00000011485 62 0.891 - - - - - - - 0.891 - - hypocretin neuropeptide precursor [Source:NCBI gene;Acc:374005]
18. TMX1 ENSGALG00000020340 6 0.891 - - - - - - - 0.891 - - thioredoxin related transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:15487]
19. ST8SIA5 ENSGALG00000035927 4 0.891 - - - - - - - 0.891 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
20. ABCB1LB ABCB1LB 4 0.891 - - - - - - - 0.891 - -
21. ATF6 ENSGALG00000032278 71 0.891 - - - - - - - 0.891 - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
22. NRG2 ENSGALG00000033641 61 0.886 - - - - - - - - - 0.886 neuregulin 2 [Source:HGNC Symbol;Acc:HGNC:7998]
23. LOC417937 ENSGALG00000011717 31 0.883 - - - - - - 0.883 - - - solute carrier family 23 member 1-like, transcript variant X1
24. BPIFB8 BPIFB8 49 0.878 - - - - - - 0.878 - - -
25. KHDRBS3 ENSGALG00000031519 501 0.868 - - - - - - - - - 0.868 KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
26. SLC24A5 ENSGALG00000004885 8 0.863 - - - - - - 0.863 - - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
27. NDST3 22 0.863 - - - - - - 0.863 - - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
28. MST MST 9 0.863 - - - - - - 0.863 - - -
29. ANKEF1 ENSGALG00000008996 12 0.863 - - - - - - 0.863 - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
30. C15orf39 ENSGALG00000027805 1 0.863 - - - - - - 0.863 - - - chromosome 15 open reading frame 39, transcript variant X2
31. AQP12 AQP12 11 0.863 - - - - - - 0.863 - - -
32. EDRF1 26 0.863 - - - - - - 0.863 - - - erythroid differentiation regulatory factor 1
33. WARS2 ENSGALG00000014772 29 0.863 - - - - - - 0.863 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
34. CLVS2 ENSGALG00000014853 22 0.863 - - - - - - 0.863 - - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
35. MYOM3 ENSGALG00000004155 86 0.863 - - - - - - 0.863 - - - myomesin 3 [Source:HGNC Symbol;Acc:HGNC:26679]
36. LOC769486 ENSGALG00000029144 20 0.863 - - - - - - 0.863 - - - scale keratin-like, transcript variant X1
37. SAMD10 ENSGALG00000006007 15 0.863 - - - - - - 0.863 - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
38. PARD6B ENSGALG00000007994 15 0.863 - - - - - - 0.863 - - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
39. DENND3 ENSGALG00000031380 11 0.863 - - - - - - 0.863 - - - DENN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29134]
40. TLR5 ENSGALG00000009392 28 0.863 - - - - - - - - - 0.863 toll like receptor 5 [Source:NCBI gene;Acc:554217]
41. CHRNG ENSGALG00000007906 19 0.863 - - - - - - 0.863 - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
42. ABI2 ENSGALG00000008714 27 0.863 - - - - - - 0.863 - - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
43. NRAP ENSGALG00000008914 24 0.863 - - - - - - 0.863 - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
44. GTF3C3 ENSGALG00000007958 6 0.863 - - - - - - 0.863 - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
45. GABRP ENSGALG00000002152 17 0.863 - - - - - - 0.863 - - - gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
46. HS3ST5 ENSGALG00000026594 44 0.863 - - - - - - 0.863 - - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
47. CDC20B ENSGALG00000046188 10 0.863 - - - - - - 0.863 - - - cell division cycle 20B [Source:HGNC Symbol;Acc:HGNC:24222]
48. ENSGALG00000013327 ENSGALG00000013327 16 0.863 - - - - - - 0.863 - - -
49. BICD1 ENSGALG00000012934 112 0.863 - - - - - - 0.863 - - - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
50. MSGN1 ENSGALG00000016469 17 0.856 - - - - - - - 0.856 - - mesogenin 1 [Source:NCBI gene;Acc:395419]
51. ALOX5AP ENSGALG00000026781 28 0.856 - - - - - - - 0.856 - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
52. LCA5L ENSGALG00000016125 99 0.849 - - - - - - 0.849 - - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
53. CA4 ENSGALG00000005360 3 0.843 - - - - - - 0.843 - - - carbonic anhydrase 4 [Source:HGNC Symbol;Acc:HGNC:1375]
54. TRMT13 ENSGALG00000005290 95 0.843 - - - - - - - 0.843 - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
55. NKX2-8 ENSGALG00000028483 174 0.838 - - - - - - - 0.838 - - NK2 homeobox 8 [Source:HGNC Symbol;Acc:HGNC:16364]
56. CLDN12 ENSGALG00000009038 16 0.837 - - - - - - - 0.837 - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
57. NFXL1 ENSGALG00000014138 36 0.835 - - - - - - - 0.835 - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
58. MMR1L3 ENSGALG00000008638 26 0.832 - - - - - - - 0.832 - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
59. C8H1ORF52 C8H1ORF52 118 0.83 - - - - - - - 0.830 - -
60. RAD51B ENSGALG00000009491 199 0.824 - - - - - - - - - 0.824 RAD51 paralog B [Source:HGNC Symbol;Acc:HGNC:9822]
61. SNCA ENSGALG00000010379 160 0.824 - - - - - - - - - 0.824 synuclein alpha [Source:NCBI gene;Acc:395393]
62. CYR61 ENSGALG00000008661 43 0.81 - - 0.810 - - - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
63. ENSGALG00000016214 ENSGALG00000016214 26 0.806 - - - - - - - 0.806 - -
64. SLC35F5 ENSGALG00000012166 25 0.805 - - - - - - - 0.805 - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
65. PRPS2 ENSGALG00000016592 165 0.803 - - - - - - - - - 0.803 phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
66. LAMB4 ENSGALG00000007917 54 0.802 - - - - - - - 0.802 - - laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
67. ENSGALG00000010883 ENSGALG00000010883 10 0.802 - - - - - - 0.802 - - -
68. LOC421415 ENSGALG00000010024 12 0.802 - - - - - - 0.802 - - - uncharacterized LOC421415, transcript variant X6
69. TMUB1 ENSGALG00000036361 4686 0.798 - - - - - 0.798 - - - - transmembrane and ubiquitin like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21709]
70. CCDC180 109 0.797 - - - - - - 0.797 - - - coiled-coil domain containing 180
71. SNTG2 ENSGALG00000016367 42 0.793 - - - - - - - - - 0.793 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
72. CD101 12 0.791 - - - - - - 0.791 - - - CD101 molecule, transcript variant X4
73. RFX4 ENSGALG00000012647 119 0.791 - - - - - - 0.791 - - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
74. POC5 ENSGALG00000014960 123 0.789 - - - - - - 0.789 - - - POC5 centriolar protein, transcript variant X1
75. MSI2 ENSGALG00000005567 31 0.789 - - - - - - 0.789 - - - musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585]
76. KLHL22 ENSGALG00000006422 132 0.784 - - - - - - - - - 0.784 kelch like family member 22, transcript variant X2
77. PAK3 ENSGALG00000008058 234 0.782 - - - - - - - - - 0.782 p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
78. ENSGALG00000002020 ENSGALG00000002020 183 0.781 - - - - - - - - - 0.781
79. NUDT2 ENSGALG00000027295 15 0.776 - - - - - - 0.776 - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
80. ARL8A ENSGALG00000000606 26 0.773 - - - - - - 0.773 - - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
81. LCT ENSGALG00000012260 21 0.773 - - - - - - 0.773 - - - lactase [Source:NCBI gene;Acc:424294]
82. DNAI2 ENSGALG00000004495 45 0.772 - - - - - - - - - 0.772 dynein axonemal intermediate chain 2
83. FRK ENSGALG00000014979 65 0.768 - - - - - - - 0.768 - - fyn related Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3955]
84. PITRM1 ENSGALG00000007036 244 0.76 - - - - - - 0.760 - - - pitrilysin metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:17663]
85. EFNA5 ENSGALG00000000280 308 0.756 - - - - - - - - - 0.756 ephrin A5 [Source:NCBI gene;Acc:396100]
86. ENSGALG00000020283 ENSGALG00000020283 10 0.755 - - - - - - 0.755 - - -
87. ENSGALG00000011516 ENSGALG00000011516 24 0.755 - - - - - - 0.755 - - -
88. ARSK ENSGALG00000014672 395 0.755 - - - - - - - - - 0.755 arylsulfatase family member K [Source:NCBI gene;Acc:427116]
89. PNMT ENSGALG00000027281 14 0.754 - - - - - - - - - 0.754 phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
90. ENSGALG00000026583 ENSGALG00000026583 1 0.752 - - - - 0.752 - - - - -
91. ENSGALG00000012324 ENSGALG00000012324 4 0.752 - - - - 0.752 - - - - -
92. F13A1 ENSGALG00000012802 16 0.752 - - - - 0.752 - - - - - coagulation factor XIII A chain [Source:NCBI gene;Acc:395420]
93. LOC396098 ENSGALG00000015461 3 0.752 - - - - 0.752 - - - - - B6.1
94. UBE3D ENSGALG00000015860 6 0.752 - - - - 0.752 - - - - - ubiquitin protein ligase E3D [Source:HGNC Symbol;Acc:HGNC:21381]
95. RFX7 ENSGALG00000041896 69 0.752 - - - - 0.752 - - - - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
96. ARL8A_1 ENSGALG00000000606 23 0.752 - - - - 0.752 - - - - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
97. Mar-02 Mar-02 7 0.752 - - - - 0.752 - - - - -
98. ENSGALG00000005427 ENSGALG00000005427 4 0.752 - - - - 0.752 - - - - -
99. FAM3D ENSGALG00000007152 4 0.752 - - - - 0.752 - - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
100. FEM1A ENSGALG00000004168 14 0.752 - - - - 0.752 - - - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]

There are 53 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA