Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EFCAB6

Gene Name Gene ID Reads Annotation
EFCAB6 ENSGALG00000014188 139 EF-hand calcium binding domain 6, transcript variant X3











Genes with expression patterns similar to EFCAB6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EFCAB6 ENSGALG00000014188 139 7 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 EF-hand calcium binding domain 6, transcript variant X3
2. SCML4 ENSGALG00000015309 499 3.464 - - 0.899 - - 0.734 - - 0.901 0.930 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
3. STMN2 ENSGALG00000039690 989 3.23 - - 0.867 0.751 - - - - 0.834 0.778 stathmin 2 [Source:NCBI gene;Acc:396095]
4. MNX1 ENSGALG00000041154 244 2.637 - - 0.869 - - - - - 0.857 0.911 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
5. GAP43 ENSGALG00000015089 505 2.602 - - 0.892 - - - - - 0.786 0.924 growth associated protein 43 [Source:NCBI gene;Acc:427955]
6. EF1A EF1A 2378 2.407 - - 0.795 - - - - - 0.823 0.789
7. ISL1 ENSGALG00000014884 7666 2.391 - - 0.913 - - - - - 0.715 0.763 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
8. SLC10A4 ENSGALG00000033908 300 2.388 - - 0.705 - - - - - 0.885 0.798 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
9. MYT1 ENSGALG00000005932 2017 2.355 - - 0.840 - - - - - 0.715 0.800 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
10. NEFL ENSGALG00000000314 4883 2.297 - - 0.742 - - - - - 0.731 0.824 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
11. SYT4 ENSGALG00000042626 384 2.263 - - 0.772 - - - - - 0.779 0.712 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
12. GPM6A ENSGALG00000043480 2133 2.194 - - 0.703 - - - - - 0.755 0.736 glycoprotein M6A [Source:NCBI gene;Acc:422569]
13. UTS2D UTS2D 2246 1.787 - - 0.933 - - - - - - 0.854
14. MNR2 ENSGALG00000011349 3340 1.687 - - 0.911 - - - - - 0.776 - homeodomain protein
15. RTN1 ENSGALG00000012006 2438 1.655 - - - - - - - - 0.839 0.816 reticulon 1 [Source:NCBI gene;Acc:378791]
16. SIAT8C SIAT8C 178 1.646 - - - - - - - - 0.862 0.784
17. PHACTR3 250 1.626 - - - - - - 0.910 - - 0.716 phosphatase and actin regulator 3, transcript variant X4
18. ECEL1 ENSGALG00000030420 670 1.624 - - - - - - - - 0.843 0.781 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
19. SLC5A7 ENSGALG00000016804 93 1.601 - - - - - - - - 0.869 0.732 solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
20. GRM3 ENSGALG00000006576 474 1.595 - - - - - - - - 0.781 0.814 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
21. INA ENSGALG00000028238 208 1.592 - - - - - - - - 0.804 0.788 internexin neuronal intermediate filament protein alpha
22. ELAVL4 ENSGALG00000010533 4978 1.581 - - - - - - - - 0.778 0.803 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
23. SNAP25 ENSGALG00000009003 222 1.564 - - 0.731 - - - - - - 0.833 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
24. CDH12 ENSGALG00000012941 223 1.552 - - 0.716 - - - - - - 0.836 cadherin 12, transcript variant X8
25. NFASC ENSGALG00000031776 4264 1.516 - - - - - - - - 0.768 0.748 neurofascin [Source:NCBI gene;Acc:419824]
26. BAI1 BAI1 235 1.432 - - - - - - - - 0.707 0.725
27. MAPRE2 ENSGALG00000015215 58 0.952 - - - - - 0.952 - - - - microtubule associated protein RP/EB family member 2 [Source:NCBI gene;Acc:421105]
28. NR5A1 ENSGALG00000001080 141 0.941 - - - - - 0.941 - - - - nuclear receptor subfamily 5 group A member 1 [Source:NCBI gene;Acc:395960]
29. SHISA3 ENSGALG00000026042 1108 0.936 - - 0.936 - - - - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
30. GUCA1A ENSGALG00000001431 6 0.93 - - - - - 0.930 - - - - guanylate cyclase activator 1A [Source:NCBI gene;Acc:374216]
31. CXorf22 CXorf22 20 0.93 - - - - - 0.930 - - - -
32. GLDN ENSGALG00000013293 1 0.93 - - - - - 0.930 - - - - gliomedin [Source:HGNC Symbol;Acc:HGNC:29514]
33. PIT-1 PIT-1 8 0.93 - - - - - 0.930 - - - -
34. gga-mir-3064 ENSGALG00000027517 1 0.93 - - - - - 0.930 - - - - gga-mir-3064 [Source:miRBase;Acc:MI0022380]
35. CLIP4 ENSGALG00000009024 4 0.93 - - - - - 0.930 - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
36. DLX1 ENSGALG00000018439 16 0.93 - - - - - 0.930 - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
37. GFAP ENSGALG00000000909 21 0.93 - - - - - 0.930 - - - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
38. TMEM63C ENSGALG00000010406 1 0.93 - - - - - 0.930 - - - - transmembrane protein 63C [Source:HGNC Symbol;Acc:HGNC:23787]
39. U6_1 U6_1 3 0.93 - - - - - 0.930 - - - -
40. C2CD2L ENSGALG00000034014 2 0.93 - - - - - 0.930 - - - - C2CD2 like [Source:NCBI gene;Acc:428233]
41. ENSGALG00000020592 ENSGALG00000020592 2 0.93 - - - - - 0.930 - - - -
42. ZHX2 ENSGALG00000043827 13 0.93 - - - - - 0.930 - - - - zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
43. WWOX ENSGALG00000005377 0 0.93 - - - - - 0.930 - - - - WW domain containing oxidoreductase [Source:NCBI gene;Acc:415801]
44. ENSGALG00000019667 ENSGALG00000019667 16 0.93 - - - - - 0.930 - - - -
45. ZP2 ENSGALG00000002428 10 0.93 - - - - - 0.930 - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
46. HTR3A ENSGALG00000007004 7 0.93 - - - - - 0.930 - - - - 5-hydroxytryptamine receptor 3A [Source:HGNC Symbol;Acc:HGNC:5297]
47. HORMAD2 ENSGALG00000008037 1 0.93 - - - - - 0.930 - - - - HORMA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28383]
48. CITED2 ENSGALG00000013818 4 0.93 - - - - - 0.930 - - - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
49. EPGN ENSGALG00000010859 187 0.93 - - - - - 0.930 - - - - epithelial mitogen [Source:NCBI gene;Acc:497270]
50. DOK4 ENSGALG00000001160 2 0.93 - - - - - 0.930 - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
51. EPB41L5 ENSGALG00000011605 18 0.93 - - - - - 0.930 - - - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
52. ADTRP ENSGALG00000032683 66 0.93 - - - - - 0.930 - - - - androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
53. CALCRL ENSGALG00000002632 4 0.93 - - - - - 0.930 - - - - calcitonin receptor like receptor [Source:NCBI gene;Acc:423990]
54. MBL2 ENSGALG00000002507 17 0.93 - - - - - 0.930 - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
55. ENSGALG00000028222 ENSGALG00000028222 44 0.93 - - - - - 0.930 - - - -
56. MESP2_1 ENSGALG00000008275 1 0.93 - - - - - 0.930 - - - - mesoderm posterior bHLH transcription factor 2
57. LOC423752 ENSGALG00000020899 17 0.93 - - - - - 0.930 - - - - uncharacterized LOC423752, transcript variant X1
58. ABCF3 ENSGALG00000008480 974 0.93 - - - - - 0.930 - - - - ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]
59. ENSGALG00000024319 ENSGALG00000024319 2 0.93 - - - - - 0.930 - - - -
60. SRD5A1 ENSGALG00000013063 1 0.93 - - - - - 0.930 - - - - steroid 5 alpha-reductase 1 [Source:HGNC Symbol;Acc:HGNC:11284]
61. ENSGALG00000027637 ENSGALG00000027637 7 0.93 - - - - - 0.930 - - - -
62. BRF2 ENSGALG00000003124 1 0.93 - - - - - 0.930 - - - - BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
63. TRIM2 ENSGALG00000009207 44 0.93 - - - - - 0.930 - - - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
64. TGM4 ENSGALG00000033171 19 0.93 - - - - - 0.930 - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
65. CC2D1B ENSGALG00000010619 66 0.91 - - - - - - 0.910 - - - coiled-coil and C2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29386]
66. LNPEP ENSGALG00000015301 13 0.892 - - - - - 0.892 - - - - leucyl and cystinyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:6656]
67. ACD ENSGALG00000044706 6 0.879 - - - - - 0.879 - - - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
68. GPAM ENSGALG00000008795 18 0.872 - - - - - - 0.872 - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:24865]
69. GLT8D2 ENSGALG00000034078 11 0.869 - - - 0.869 - - - - - - glycosyltransferase 8 domain containing 2 [Source:NCBI gene;Acc:418085]
70. MAP1B ENSGALG00000014999 6288 0.866 - - - - - - - - - 0.866 microtubule associated protein 1B
71. PIRT 41 0.864 - - - - - 0.864 - - - - phosphoinositide-interacting regulator of transient receptor potential channels
72. CAPN2 ENSGALG00000009360 8 0.864 - - - - - 0.864 - - - - calpain 2 [Source:NCBI gene;Acc:395963]
73. SPINK7 SPINK7 254 0.862 - - 0.862 - - - - - - -
74. DAZL ENSGALG00000011243 34 0.861 - - - - - - 0.861 - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
75. MBLAC2 ENSGALG00000014649 16 0.861 - - - - - - 0.861 - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
76. KRT20 ENSGALG00000019716 11 0.861 - - - - - - 0.861 - - - keratin 20 [Source:NCBI gene;Acc:420045]
77. INTS3 8 0.861 - - - - - - 0.861 - - - integrator complex subunit 3, transcript variant X2
78. CYP39A1 ENSGALG00000016710 16 0.861 - - - - - - 0.861 - - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
79. JMJD4 ENSGALG00000005417 10 0.861 - - - - - - 0.861 - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
80. GBP ENSGALG00000026152 38 0.861 - - - - - - 0.861 - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
81. FAM26D ENSGALG00000014955 1 0.861 - - - - - - 0.861 - - - family with sequence similarity 26 member D
82. ENSGALG00000000789 ENSGALG00000000789 24 0.861 - - - - - - 0.861 - - -
83. gga-mir-1801 ENSGALG00000025241 13 0.861 - - - - - - 0.861 - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
84. ENSGALG00000018374 ENSGALG00000018374 3 0.861 - - - - - - 0.861 - - -
85. AGPAT2 ENSGALG00000023517 21 0.861 - - - - - - 0.861 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
86. STK31 ENSGALG00000010980 4 0.861 - - - - - - 0.861 - - - serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407]
87. ODF1 ENSGALG00000035199 32 0.861 - - - - - - 0.861 - - - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
88. DNAI2 ENSGALG00000004495 45 0.861 - - - - - - 0.861 - - - dynein axonemal intermediate chain 2
89. LPP ENSGALG00000007337 18 0.861 - - - - - - 0.861 - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
90. DDAH1 ENSGALG00000008663 8 0.861 - - - - - - 0.861 - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
91. SNAPC4 ENSGALG00000044726 36 0.861 - - - - - - 0.861 - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
92. SYTL2L ENSGALG00000008326 5 0.861 - - - - - - 0.861 - - - synaptotagmin-like protein 2-like, transcript variant X4
93. RBBP6_1 ENSGALG00000006043 26 0.861 - - - - - - 0.861 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
94. PDE6C ENSGALG00000006626 6 0.861 - - - - - - 0.861 - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
95. HOXB4 ENSGALG00000000284 16 0.861 - - - - - - 0.861 - - - homeobox B4 [Source:NCBI gene;Acc:396230]
96. gga-mir-1652 ENSGALG00000025444 119 0.861 - - - - - - 0.861 - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
97. WNT9A ENSGALG00000005401 7 0.861 - - - - - - 0.861 - - - Wnt family member 9A [Source:NCBI gene;Acc:395829]
98. FAM120B ENSGALG00000011180 101 0.861 - - - - - - 0.861 - - - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
99. AMER3 ENSGALG00000041501 5 0.861 - - - - - - 0.861 - - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
100. SLC22A13 ENSGALG00000005934 8 0.854 - - - - - 0.854 - - - - solute carrier family 22 member 13

There are 92 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA