Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EFCAB1

Gene Name Gene ID Reads Annotation
EFCAB1 ENSGALG00000009473 41 EF-hand calcium binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25678]











Genes with expression patterns similar to EFCAB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EFCAB1 ENSGALG00000009473 41 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 EF-hand calcium binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25678]
2. SLC24A5 ENSGALG00000004885 8 1.79 - - - - 0.942 - 0.848 - - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
3. ENSGALG00000020283 ENSGALG00000020283 10 1.662 - - - - - - 0.742 0.920 - -
4. CD101 12 1.548 - - - - 0.770 - 0.778 - - - CD101 molecule, transcript variant X4
5. MCF2 ENSGALG00000006562 59 1 - - - - - - 1.000 - - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
6. NR1D1 ENSGALG00000001035 3 0.942 - - - - 0.942 - - - - - nuclear receptor subfamily 1, group D, member 1, transcript variant X2
7. SLC35B3 ENSGALG00000012778 30 0.885 - - - - 0.885 - - - - - solute carrier family 35 member B3 [Source:HGNC Symbol;Acc:HGNC:21601]
8. GABRP ENSGALG00000002152 17 0.848 - - - - - - 0.848 - - - gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
9. HS3ST5 ENSGALG00000026594 44 0.848 - - - - - - 0.848 - - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
10. CDC20B ENSGALG00000046188 10 0.848 - - - - - - 0.848 - - - cell division cycle 20B [Source:HGNC Symbol;Acc:HGNC:24222]
11. NRAP ENSGALG00000008914 24 0.848 - - - - - - 0.848 - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
12. ABI2 ENSGALG00000008714 27 0.848 - - - - - - 0.848 - - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
13. GTF3C3 ENSGALG00000007958 6 0.848 - - - - - - 0.848 - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
14. BICD1 ENSGALG00000012934 112 0.848 - - - - - - 0.848 - - - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
15. ENSGALG00000013327 ENSGALG00000013327 16 0.848 - - - - - - 0.848 - - -
16. AQP12 AQP12 11 0.848 - - - - - - 0.848 - - -
17. WARS2 ENSGALG00000014772 29 0.848 - - - - - - 0.848 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
18. EDRF1 26 0.848 - - - - - - 0.848 - - - erythroid differentiation regulatory factor 1
19. CLVS2 ENSGALG00000014853 22 0.848 - - - - - - 0.848 - - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
20. NDST3 22 0.848 - - - - - - 0.848 - - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
21. MST MST 9 0.848 - - - - - - 0.848 - - -
22. ANKEF1 ENSGALG00000008996 12 0.848 - - - - - - 0.848 - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
23. C15orf39 ENSGALG00000027805 1 0.848 - - - - - - 0.848 - - - chromosome 15 open reading frame 39, transcript variant X2
24. DENND3 ENSGALG00000031380 11 0.848 - - - - - - 0.848 - - - DENN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29134]
25. PARD6B ENSGALG00000007994 15 0.848 - - - - - - 0.848 - - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
26. CHRNG ENSGALG00000007906 19 0.848 - - - - - - 0.848 - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
27. LOC769486 ENSGALG00000029144 20 0.848 - - - - - - 0.848 - - - scale keratin-like, transcript variant X1
28. SAMD10 ENSGALG00000006007 15 0.848 - - - - - - 0.848 - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
29. MYOM3 ENSGALG00000004155 86 0.848 - - - - - - 0.848 - - - myomesin 3 [Source:HGNC Symbol;Acc:HGNC:26679]
30. ZNF6 ZNF6 138 0.842 - - - - - - 0.842 - - -
31. CA4 ENSGALG00000005360 3 0.828 - - - - - - 0.828 - - - carbonic anhydrase 4 [Source:HGNC Symbol;Acc:HGNC:1375]
32. TSPAN15 ENSGALG00000004257 185 0.818 - - - - - - 0.818 - - - tetraspanin 15 [Source:NCBI gene;Acc:423699]
33. RYR2 ENSGALG00000010812 95 0.798 - - - - 0.798 - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
34. CCDC180 109 0.792 - - - - - - 0.792 - - - coiled-coil domain containing 180
35. LOC421415 ENSGALG00000010024 12 0.788 - - - - - - 0.788 - - - uncharacterized LOC421415, transcript variant X6
36. ENSGALG00000010883 ENSGALG00000010883 10 0.788 - - - - - - 0.788 - - -
37. PGAM1 ENSGALG00000007606 384 0.788 - - - - - - - 0.788 - - phosphoglycerate mutase 1 [Source:NCBI gene;Acc:428969]
38. ENSGALG00000008689 ENSGALG00000008689 232 0.788 - - - - - - 0.788 - - -
39. FADS6 ENSGALG00000029445 12 0.786 - - - - - - - - - 0.786 fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
40. RFX4 ENSGALG00000012647 119 0.778 - - - - - - 0.778 - - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
41. POC5 ENSGALG00000014960 123 0.776 - - - - - - 0.776 - - - POC5 centriolar protein, transcript variant X1
42. MSI2 ENSGALG00000005567 31 0.775 - - - - - - 0.775 - - - musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585]
43. GPR149 ENSGALG00000010337 80 0.774 - - - - - - - 0.774 - - G protein-coupled receptor 149 [Source:NCBI gene;Acc:395382]
44. ANKRD16 ENSGALG00000008168 475 0.773 - - - - - - - 0.773 - - ankyrin repeat domain 16 [Source:NCBI gene;Acc:416688]
45. BPIFB8 BPIFB8 49 0.772 - - - - - - 0.772 - - -
46. EGLN3 ENSGALG00000010001 32 0.77 - - - - 0.770 - - - - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
47. CLCA1 ENSGALG00000006322 5 0.77 - - - - 0.770 - - - - - chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]
48. UGP2 ENSGALG00000008855 20 0.77 - - - - 0.770 - - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
49. GNB4 ENSGALG00000008983 26 0.77 - - - - 0.770 - - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
50. MAT2A ENSGALG00000015366 17 0.77 - - - - 0.770 - - - - - methionine adenosyltransferase 2A, transcript variant X1
51. ENSGALG00000006897 ENSGALG00000006897 13 0.77 - - - - 0.770 - - - - -
52. XG ENSGALG00000029002 17 0.77 - - - - 0.770 - - - - - Xg blood group
53. ENSGALG00000016601 ENSGALG00000016601 16 0.77 - - - - 0.770 - - - - -
54. PCDH7 ENSGALG00000033883 6 0.77 - - - - 0.770 - - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
55. ENO4 ENSGALG00000009254 19 0.77 - - - - 0.770 - - - - - enolase 4 [Source:HGNC Symbol;Acc:HGNC:31670]
56. OSMR ENSGALG00000003747 4 0.766 - - - - - - - 0.766 - - oncostatin M receptor [Source:HGNC Symbol;Acc:HGNC:8507]
57. ENSGALG00000005812 ENSGALG00000005812 40 0.765 - - - - - - - 0.765 - -
58. ENTPD5 ENSGALG00000010202 69 0.765 - - - - - - - 0.765 - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
59. MBD5 ENSGALG00000012449 27 0.763 - - - - - - - 0.763 - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
60. SLC25A19 ENSGALG00000008011 68 0.763 - - - - - - - 0.763 - - solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]
61. ARAP3 ENSGALG00000002562 3 0.76 - - - - - - - - - 0.760 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:HGNC Symbol;Acc:HGNC:24097]
62. LCT ENSGALG00000012260 21 0.759 - - - - - - 0.759 - - - lactase [Source:NCBI gene;Acc:424294]
63. ARL8A ENSGALG00000000606 26 0.759 - - - - - - 0.759 - - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
64. SPTB ENSGALG00000036805 6 0.758 - - - - - - - - - 0.758 spectrin beta, erythrocytic [Source:HGNC Symbol;Acc:HGNC:11274]
65. ENSGALG00000018929 ENSGALG00000018929 1 0.758 - - - - - - - - - 0.758
66. RAPSN ENSGALG00000008100 53 0.758 - - - - - - - 0.758 - - receptor associated protein of the synapse [Source:NCBI gene;Acc:395986]
67. ENSGALG00000013409 ENSGALG00000013409 4 0.758 - - - - - - - 0.758 - -
68. SAPCD2 12 0.758 - - - - - - - 0.758 - - suppressor APC domain containing 2, transcript variant X1
69. TRNAU1AP ENSGALG00000001310 7 0.758 - - - - - - - 0.758 - - tRNA selenocysteine 1 associated protein 1, transcript variant X4
70. CNIH3 ENSGALG00000009308 2 0.758 - - - - - - - - - 0.758 cornichon family AMPA receptor auxiliary protein 3 [Source:HGNC Symbol;Acc:HGNC:26802]
71. KCNK3 ENSGALG00000025971 2 0.758 - - - - - - - - - 0.758 potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]
72. ENSGALG00000026498 ENSGALG00000026498 1 0.758 - - - - - - - - - 0.758
73. NPBWR1 ENSGALG00000015261 6 0.758 - - - - - - - - - 0.758 Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
74. ALK 2 0.758 - - - - - - - 0.758 - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
75. NR0B2 ENSGALG00000000887 2 0.758 - - - - - - - 0.758 - - nuclear receptor subfamily 0 group B member 2 [Source:NCBI gene;Acc:768353]
76. FBXO15 ENSGALG00000013720 4 0.758 - - - - - - - - - 0.758 F-box protein 15 [Source:HGNC Symbol;Acc:HGNC:13617]
77. ZNF777 ENSGALG00000038657 3 0.758 - - - - - - - - - 0.758 zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
78. SYNPO ENSGALG00000027330 5 0.758 - - - - - - - - - 0.758 synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]
79. KIAA1755 3 0.758 - - - - - - - - - 0.758 KIAA1755 ortholog, transcript variant X2
80. B3GALT2 ENSGALG00000002477 13 0.758 - - - - - - - - - 0.758 beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
81. KCNQ3 ENSGALG00000037626 6 0.758 - - - - - - - - - 0.758 potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
82. PDGFRL ENSGALG00000013617 11 0.758 - - - - - - - - - 0.758 platelet derived growth factor receptor like [Source:HGNC Symbol;Acc:HGNC:8805]
83. ENSGALG00000006495 ENSGALG00000006495 4 0.758 - - - - - - - - - 0.758
84. FAM171A1 ENSGALG00000008764 349 0.758 - - - - - - - 0.758 - - family with sequence similarity 171 member A1 [Source:HGNC Symbol;Acc:HGNC:23522]
85. LPAR5 ENSGALG00000014455 10 0.758 - - - - - - - - - 0.758 lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
86. NARS2 ENSGALG00000017262 12 0.758 - - - - - - - 0.758 - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26274]
87. APOB ENSGALG00000016491 34 0.758 - - - - - - - 0.758 - - apolipoprotein B [Source:NCBI gene;Acc:396535]
88. HRH1 ENSGALG00000004930 13 0.758 - - - - - - - - - 0.758 histamine receptor H1 [Source:HGNC Symbol;Acc:HGNC:5182]
89. NOD1 ENSGALG00000036807 10 0.758 - - - - - - - - - 0.758 Gallus gallus nucleotide binding oligomerization domain containing 1 (NOD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318438]
90. AIM1 51 0.758 - - - - - - - - - 0.758 absent in melanoma 1, transcript variant X2
91. TMEM132D ENSGALG00000002671 12 0.758 - - - - - - - 0.758 - - transmembrane protein 132D, transcript variant X6
92. TELO2 ENSGALG00000009297 1 0.758 - - - - - - - - - 0.758 telomere maintenance 2 [Source:HGNC Symbol;Acc:HGNC:29099]
93. CCL1 ENSGALG00000002329 2 0.758 - - - - - - - 0.758 - - C-C motif chemokine ligand 1 [Source:NCBI gene;Acc:395552]
94. RNF6 ENSGALG00000017105 11 0.757 - - - - 0.757 - - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
95. DHTKD1 ENSGALG00000003674 300 0.755 - - - - - - - 0.755 - - dehydrogenase E1 and transketolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23537]
96. CUTA ENSGALG00000001620 76 0.753 - - - - - - - 0.753 - - cutA divalent cation tolerance homolog
97. FADS2 ENSGALG00000007178 116 0.751 - - - - - - - 0.751 - - fatty acid desaturase 2 [Source:NCBI gene;Acc:423122]
98. ARHGAP22 ENSGALG00000006137 4 0.75 - - 0.750 - - - - - - - Rho GTPase activating protein 22, transcript variant X3
99. ATXN7L1 ENSGALG00000008115 84 0.749 - - - - - - - 0.749 - - ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
100. ABLIM2 ENSGALG00000043448 48 0.748 - - - - - - - 0.748 - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]

There are 36 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA